Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031484 Camellia sinensis var. sinensis HOM05D027926 ORTHO05D021369 8.5e-168 593.6 296 100.0
CSS0015230 Camellia sinensis var. sinensis HOM05D027926 ORTHO05D021369 4.7e-126 454.9 301 81.1
CSS0046984 Camellia sinensis var. sinensis HOM05D027926 ORTHO05D021369 2.7e-97 359.4 299 68.6
CSS0004861 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-29 133.7 301 36.2
CSS0025791 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.1e-29 131.7 298 31.9
CSS0041095 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.2e-28 131.3 295 32.2
CSS0008466 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.7e-28 130.2 309 33.7
CSS0038451 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.5e-27 125.6 290 33.4
CSS0007463 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.5e-26 122.5 295 31.2
CSS0028930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.0e-24 116.7 174 39.1
CSS0003220 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-21 107.8 284 32.0
CSS0013939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.6e-20 104.4 246 32.9
CSS0014549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.8e-17 93.6 134 41.0
CSS0046631 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-17 92.8 244 29.1
CSS0047699 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 4.4e-15 86.3 125 40.0
vmacro08911 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 5.7e-15 85.9 92 44.6
CSS0019991 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-15 85.1 118 39.0
Potri.005G151275 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.2e-14 84.0 175 28.0
Potri.004G128860 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
Potri.004G128880 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
Potri.004G128901 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
Potri.004G128921 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
Potri.004G128941 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
Potri.004G128961 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.8e-14 83.6 175 28.0
CANSAT80G0638 Cannabis sativa HOM05D000003 ORTHO05D000006 4.9e-14 82.8 148 33.8
Potri.003G047001 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.9e-14 82.8 175 28.0
Potri.012G063901 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.9e-14 82.8 175 28.0
Potri.009G000601 Populus trichocarpa HOM05D000003 ORTHO05D000006 6.3e-14 82.4 174 28.2
CSS0047031 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-13 80.9 282 27.0
CSS0008933 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 2.4e-13 80.5 109 40.4
Potri.019G047975 Populus trichocarpa HOM05D000003 ORTHO05D000006 4.1e-13 79.7 175 27.4
Dinv17947 Davidia involucrata HOM05D000003 ORTHO05D000006 9.2e-13 78.6 66 50.0
CSS0045782 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-12 77.4 63 54.0
EL10Ac5g11879 Beta vulgaris HOM05D000003 ORTHO05D000007 2.7e-12 77.0 161 30.4
CSS0034921 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 5.9e-12 75.9 154 33.1
CSS0044337 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-11 73.9 138 32.6
vmacro18598 Vaccinium macrocarpon HOM05D005812 ORTHO05D007232 2.3e-11 73.9 67 44.8
Dinv00733 Davidia involucrata HOM05D014648 ORTHO05D000283 2.9e-11 73.6 66 48.5
Potri.010G033133 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.9e-11 73.6 164 26.2
Potri.002G209244 Populus trichocarpa HOM05D000003 ORTHO05D000006 3.8e-11 73.2 164 26.8
vmacro17798 Vaccinium macrocarpon HOM05D000003 ORTHO05D000006 3.8e-11 73.2 92 40.2
Sabra11G0094500 Salix brachista HOM05D000003 ORTHO05D000283 1.5e-10 71.2 105 36.2
vmacro04075 Vaccinium macrocarpon HOM05D000003 ORTHO05D000007 1.5e-10 71.2 116 32.8
Sabra18G0008200 Salix brachista HOM05D000003 ORTHO05D000007 3.3e-10 70.1 105 36.2
Dinv10831 Davidia involucrata HOM05D000024 ORTHO05D000006 5.6e-10 69.3 149 28.9
Rhsim01G0145700 Rhododendron simsii HOM05D007785 ORTHO05D008997 5.6e-10 69.3 152 29.6
Sabra05G0001500 Salix brachista HOM05D002061 ORTHO05D000006 9.5e-10 68.6 69 42.0
Sabra07G0107400 Salix brachista HOM05D000003 ORTHO05D000006 9.5e-10 68.6 69 42.0
Potri.005G153775 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.6e-09 67.8 67 43.3
Potri.019G047420 Populus trichocarpa HOM05D000003 ORTHO05D000006 2.1e-09 67.4 67 41.8
Dinv25826 Davidia involucrata HOM05D000003 ORTHO05D000007 2.8e-09 67.0 135 33.3
Sabra09G0132000 Salix brachista HOM05D000003 ORTHO05D000283 2.8e-09 67.0 100 35.0
vmacro21128 Vaccinium macrocarpon HOM05D000429 ORTHO05D000352 2.8e-09 67.0 144 31.2
CSS0015987 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.6e-09 66.6 299 25.8
TWI77G0321 Tripterygium wilfordii HOM05D000003 ORTHO05D000006 3.6e-09 66.6 155 31.0
Dinv19292 Davidia involucrata HOM05D000024 ORTHO05D000006 6.1e-09 65.9 67 40.3
Sabra19G0010000 Salix brachista HOM05D000003 ORTHO05D000006 8.0e-09 65.5 69 40.6
PSO170G0227 Papaver somniferum HOM05D000003 ORTHO05D000006 1.4e-08 64.7 67 40.3
Rhsim06G0096800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.4e-08 64.7 154 28.6
Sabra11G0094800 Salix brachista HOM05D000054 ORTHO05D000283 1.4e-08 64.7 67 40.3
Sabra12G0001700 Salix brachista HOM05D000003 ORTHO05D000006 1.4e-08 64.7 68 41.2
Sabra13G0062800 Salix brachista HOM05D000003 ORTHO05D000006 1.4e-08 64.7 68 41.2
Dinv44146 Davidia involucrata HOM05D000003 ORTHO05D000007 1.8e-08 64.3 126 30.2
Aqoxy6G02142 Aquilegia oxysepala HOM05D027926 ORTHO05D021369 2.3e-08 63.9 113 33.6
Sabra01G0015900 Salix brachista HOM05D000003 ORTHO05D000006 2.3e-08 63.9 68 41.2
Sabra16G0322100 Salix brachista HOM05D000003 ORTHO05D000007 2.3e-08 63.9 97 32.0
PSO339G5630 Papaver somniferum HOM05D000003 ORTHO05D000006 3.0e-08 63.5 67 41.8
Sabra18G0006200 Salix brachista HOM05D000003 ORTHO05D000007 3.0e-08 63.5 67 40.3
CSS0043070 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.0e-08 63.2 131 30.5
SHI16695 Sapria himalayana HOM05D000024 ORTHO05D000006 4.0e-08 63.2 161 28.6
PSO173G0056 Papaver somniferum HOM05D000003 ORTHO05D000006 5.2e-08 62.8 67 41.8
Rhsim01G0276400 Rhododendron simsii HOM05D000003 ORTHO05D000007 5.2e-08 62.8 151 25.2
Dinv42653 Davidia involucrata HOM05D000003 ORTHO05D000006 6.8e-08 62.4 148 27.0
PSO210G0908 Papaver somniferum HOM05D000003 ORTHO05D000007 6.8e-08 62.4 69 42.0
Rhsim01G0175200 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.8e-08 62.4 87 40.2
Sabra10G0196600 Salix brachista HOM05D000003 ORTHO05D000006 6.8e-08 62.4 91 35.2
Sabra19G0073100 Salix brachista HOM05D000003 ORTHO05D000006 6.8e-08 62.4 91 35.2
Dinv05746 Davidia involucrata HOM05D010330 ORTHO05D000006 8.9e-08 62.0 67 41.8
Potri.003G046951 Populus trichocarpa HOM05D000003 ORTHO05D000006 8.9e-08 62.0 51 43.1
Rhsim08G0169600 Rhododendron simsii HOM05D000003 ORTHO05D000004 8.9e-08 62.0 155 25.2
PSO339G3978 Papaver somniferum HOM05D000003 ORTHO05D000006 1.2e-07 61.6 67 38.8
Sabra16G0321900 Salix brachista HOM05D000003 ORTHO05D000007 1.2e-07 61.6 107 32.7
Rhsim12G0079800 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.5e-07 61.2 132 30.3
Dinv02513 Davidia involucrata HOM05D000003 ORTHO05D000006 2.0e-07 60.8 110 31.8
PSO210G4856 Papaver somniferum HOM05D000003 ORTHO05D000004 2.0e-07 60.8 130 29.2
Sabra15G0108100 Salix brachista HOM05D000434 ORTHO05D005992 2.0e-07 60.8 69 40.6
CANSAT21G0962 Cannabis sativa HOM05D000003 ORTHO05D000006 2.6e-07 60.5 131 29.8
Sabra19G0060500 Salix brachista HOM05D000003 ORTHO05D000006 2.6e-07 60.5 69 37.7
PSO801G0848 Papaver somniferum HOM05D000003 ORTHO05D000006 4.4e-07 59.7 69 39.1
ECA153G0011 Erigeron canadensis HOM05D000003 ORTHO05D000004 5.7e-07 59.3 120 30.8
PSO339G1478 Papaver somniferum HOM05D000003 ORTHO05D000006 5.7e-07 59.3 69 39.1
Rhsim05G0192100 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.7e-07 59.3 136 25.7
Rhsim08G0178900 Rhododendron simsii HOM05D000003 ORTHO05D000006 5.7e-07 59.3 66 42.4
SHI36013 Sapria himalayana HOM05D000107 ORTHO05D000062 5.7e-07 59.3 165 28.5
Aqoxy1G03910 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 7.5e-07 58.9 175 25.1
Manes.04G023350 Manihot esculenta HOM05D000024 ORTHO05D000006 7.5e-07 58.9 139 29.5
PSO541G2183 Papaver somniferum HOM05D000003 ORTHO05D000004 7.5e-07 58.9 67 38.8
Sabra01G0045400 Salix brachista HOM05D000003 ORTHO05D000006 7.5e-07 58.9 69 36.2
Sabra16G0124300 Salix brachista HOM05D000003 ORTHO05D000006 7.5e-07 58.9 69 39.1
PGSC0003DMG400045833 Solanum tuberosum HOM05D000003 ORTHO05D000004 7.5e-07 58.9 71 33.8
CANSAT35G1573 Cannabis sativa HOM05D000003 ORTHO05D000006 9.8e-07 58.5 174 25.3
Dinv13615 Davidia involucrata HOM05D000003 ORTHO05D000007 9.8e-07 58.5 361 23.8
Rhsim07G0213000 Rhododendron simsii HOM05D000003 ORTHO05D008945 9.8e-07 58.5 72 37.5
Sabra03G0065400 Salix brachista HOM05D000003 ORTHO05D000006 9.8e-07 58.5 111 33.3
Sabra11G0062400 Salix brachista HOM05D000003 ORTHO05D000283 9.8e-07 58.5 67 37.3
Aqoxy1G02664 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 1.3e-06 58.2 69 40.6
Dinv29992 Davidia involucrata HOM05D000024 ORTHO05D000006 1.3e-06 58.2 179 23.5
Sabra03G0102700 Salix brachista HOM05D000003 ORTHO05D000283 1.7e-06 57.8 69 33.3
Sabra07G0044400 Salix brachista HOM05D000003 ORTHO05D000007 1.7e-06 57.8 102 29.4
SHI48798 Sapria himalayana HOM05D000024 ORTHO05D000006 1.7e-06 57.8 67 43.3
Sopen00g009450 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 69 39.1
Sopen00g009650 Solanum pennellii HOM05D000003 ORTHO05D000004 1.7e-06 57.8 69 37.7
Sopen00g010970 Solanum pennellii HOM05D000003 ORTHO05D000006 1.7e-06 57.8 69 37.7
vmacro20957 Vaccinium macrocarpon HOM05D003698 ORTHO05D004320 1.7e-06 57.8 86 32.6
Aqoxy1G03780 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 2.2e-06 57.4 67 41.8
CANSAT80G2638 Cannabis sativa HOM05D000003 ORTHO05D000006 2.2e-06 57.4 191 23.6
Rhsim06G0043400 Rhododendron simsii HOM05D000003 ORTHO05D000006 2.2e-06 57.4 73 39.7
Rhsim11G0146500 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.2e-06 57.4 82 36.6
Sabra08G0097100 Salix brachista HOM05D000003 ORTHO05D000006 2.2e-06 57.4 75 37.3
Sabra14G0013500 Salix brachista HOM05D000003 ORTHO05D000006 2.2e-06 57.4 69 37.7
CANSAT11G1818 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-06 57.0 69 40.6
Sabra02G0165600 Salix brachista HOM05D000003 ORTHO05D000006 2.9e-06 57.0 94 35.1
SHI00696 Sapria himalayana HOM05D000024 ORTHO05D000006 2.9e-06 57.0 74 39.2
SHI14738 Sapria himalayana HOM05D000003 ORTHO05D000004 2.9e-06 57.0 157 23.6
SHI44875 Sapria himalayana HOM05D000024 ORTHO05D000007 2.9e-06 57.0 75 36.0
PGSC0003DMG400003817 Solanum tuberosum HOM05D000024 ORTHO05D000006 2.9e-06 57.0 65 38.5
SGA_v2.0_scaffold14G07070 Striga asiatica HOM05D000003 ORTHO05D000004 2.9e-06 57.0 70 37.1
Aqoxy7G03417 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 3.7e-06 56.6 69 37.7
CANSAT64G1939 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-06 56.6 69 40.6
Dinv15150 Davidia involucrata HOM05D000024 ORTHO05D000006 3.7e-06 56.6 95 32.6
ECA234G0059 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-06 56.6 72 37.5
ECA246G4460 Erigeron canadensis HOM05D000003 ORTHO05D000004 3.7e-06 56.6 80 36.2
HanXRQChr03g0079511 Helianthus annuus HOM05D000003 ORTHO05D000004 3.7e-06 56.6 101 32.7
PSO170G3369 Papaver somniferum HOM05D000003 ORTHO05D000004 3.7e-06 56.6 135 30.4
QL05p073923 Quercus lobata HOM05D000003 ORTHO05D000006 3.7e-06 56.6 67 37.3
Sabra02G0183300 Salix brachista HOM05D000971 ORTHO05D000901 3.7e-06 56.6 108 32.4
Sabra06G0131500 Salix brachista HOM05D000003 ORTHO05D000006 3.7e-06 56.6 69 34.8
SHI45047 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 56.6 67 40.3
SHI49069 Sapria himalayana HOM05D000024 ORTHO05D000006 3.7e-06 56.6 67 38.8
SEGI_36913 Sequoiadendron giganteum HOM05D000003 ORTHO05D000006 3.7e-06 56.6 154 26.6
Aqoxy2G01321 Aquilegia oxysepala HOM05D000003 ORTHO05D000006 4.9e-06 56.2 73 35.6
CSS0020474 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 56.2 43 60.5
CSS0048868 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 56.2 43 60.5
Dinv06088 Davidia involucrata HOM05D000003 ORTHO05D000007 4.9e-06 56.2 136 28.7
ECA236G3921 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-06 56.2 101 32.7
ECA246G0046 Erigeron canadensis HOM05D000003 ORTHO05D000004 4.9e-06 56.2 77 33.8
PSO170G0824 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 67 37.3
PSO478G1074 Papaver somniferum HOM05D000003 ORTHO05D000004 4.9e-06 56.2 67 41.8
Rhsim02G0067400 Rhododendron simsii HOM05D000150 ORTHO05D000108 4.9e-06 56.2 86 34.9
Rhsim02G0134700 Rhododendron simsii HOM05D000003 ORTHO05D000006 4.9e-06 56.2 95 32.6
SHI38803 Sapria himalayana HOM05D000024 ORTHO05D000006 4.9e-06 56.2 74 39.2
Sopen00g008230 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-06 56.2 69 37.7
Sopen00g008350 Solanum pennellii HOM05D000003 ORTHO05D000004 4.9e-06 56.2 69 34.8
TAR536G0010 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.9e-06 56.2 73 38.4
TAR547G0003 Trochodendron aralioides HOM05D000003 ORTHO05D000006 4.9e-06 56.2 69 40.6
Dinv02967 Davidia involucrata HOM05D000003 ORTHO05D000006 6.4e-06 55.8 167 24.6
ECA246G1591 Erigeron canadensis HOM05D000004 ORTHO05D000002 6.4e-06 55.8 98 32.7
FvH4_2g05131 Fragaria vesca HOM05D000003 ORTHO05D000006 6.4e-06 55.8 54 40.7
Nitab4.5_0008471g0040 Nicotiana tabacum HOM05D000024 ORTHO05D000006 6.4e-06 55.8 77 37.7
PSO339G2335 Papaver somniferum HOM05D000003 ORTHO05D000004 6.4e-06 55.8 66 36.4
Rhsim01G0092300 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.4e-06 55.8 72 36.1
Rhsim02G0238600 Rhododendron simsii HOM05D000003 ORTHO05D000006 6.4e-06 55.8 90 36.7
Sabra06G0000500 Salix brachista HOM05D000003 ORTHO05D000007 6.4e-06 55.8 70 31.4
Sabra08G0163900 Salix brachista HOM05D000003 ORTHO05D000006 6.4e-06 55.8 64 37.5
Sabra13G0086400 Salix brachista HOM05D000003 ORTHO05D000007 6.4e-06 55.8 75 40.0
Sabra16G0051100 Salix brachista HOM05D000003 ORTHO05D000006 6.4e-06 55.8 69 39.1
SHI33630 Sapria himalayana HOM05D000024 ORTHO05D000006 6.4e-06 55.8 65 40.0
SHI37506 Sapria himalayana HOM05D000024 ORTHO05D000006 6.4e-06 55.8 68 39.7
Sopen00g008680 Solanum pennellii HOM05D000003 ORTHO05D000004 6.4e-06 55.8 96 33.3
TPR.G13108 Trifolium pratense HOM05D000003 ORTHO05D000004 6.4e-06 55.8 87 34.5
TWI23G1168 Tripterygium wilfordii HOM05D000003 ORTHO05D000004 6.4e-06 55.8 72 31.9
Atru.chr12.1720 Acer truncatum HOM05D000003 ORTHO05D000004 8.3e-06 55.5 69 36.2
CANSAT54G2584 Cannabis sativa HOM05D000003 ORTHO05D000006 8.3e-06 55.5 175 25.7
CANSAT56G2611 Cannabis sativa HOM05D000003 ORTHO05D000004 8.3e-06 55.5 141 27.7
Dinv21537 Davidia involucrata HOM05D000003 ORTHO05D000006 8.3e-06 55.5 69 36.2
MBI03_g26338_MAGBIO Magnolia biondii HOM05D000024 ORTHO05D000006 8.3e-06 55.5 65 33.8
Manes.16G093425 Manihot esculenta HOM05D000024 ORTHO05D000006 8.3e-06 55.5 74 36.5
PSO339G5824 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-06 55.5 67 35.8
QL07p019949 Quercus lobata HOM05D000003 ORTHO05D000006 8.3e-06 55.5 69 36.2
Sabra01G0032100 Salix brachista HOM05D000003 ORTHO05D000006 8.3e-06 55.5 70 35.7
SHI19638 Sapria himalayana HOM05D000024 ORTHO05D000006 8.3e-06 55.5 67 40.3
SHI50904 Sapria himalayana HOM05D000003 ORTHO05D000006 8.3e-06 55.5 185 23.2
Sopen00g012810 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-06 55.5 69 36.2
Sopen03g020890 Solanum pennellii HOM05D000003 ORTHO05D000006 8.3e-06 55.5 74 36.5
Sopen12g011790 Solanum pennellii HOM05D000003 ORTHO05D000004 8.3e-06 55.5 69 37.7


User provided reference genes

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