Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031480 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 7.5e-167 590.5 310 100.0
CSS0007181 Camellia sinensis var. sinensis HOM05D003815 ORTHO05D004580 1.4e-165 586.3 310 98.1
Dinv04311 Davidia involucrata HOM05D003815 ORTHO05D004580 1.9e-149 532.7 310 86.5
vmacro11847 Vaccinium macrocarpon HOM05D003815 ORTHO05D004580 3.9e-147 525.0 310 89.7
Oeu005415.1 Olea europaea HOM05D003815 ORTHO05D004580 6.2e-145 517.7 307 84.4
Eucgr.F01118 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.8e-144 516.2 310 87.4
TAR629G1246 Trochodendron aralioides HOM05D003815 ORTHO05D004580 4.0e-144 515.0 310 84.2
GSVIVG01014351001 Vitis vinifera HOM05D003815 ORTHO05D004580 4.0e-144 515.0 307 84.4
PGSC0003DMG400025035 Solanum tuberosum HOM05D003815 ORTHO05D004580 3.4e-143 511.9 284 89.1
Sopen10g002890 Solanum pennellii HOM05D003815 ORTHO05D004580 9.9e-143 510.4 284 88.7
Ciclev10009061m.g Citrus clementina HOM05D003815 ORTHO05D004580 3.8e-142 508.4 311 83.3
Migut.M00813 Erythranthe guttata HOM05D003815 ORTHO05D004580 8.4e-142 507.3 305 84.6
Nn1g06558 Nelumbo nucifera HOM05D003815 ORTHO05D004580 3.2e-141 505.4 311 81.4
Potri.011G120100 Populus trichocarpa HOM05D003815 ORTHO05D004580 3.2e-141 505.4 307 82.7
PGR083G0800 Punica granatum HOM05D003815 ORTHO05D004580 5.4e-141 504.6 310 81.0
Cfa020596 Carpinus fangiana HOM05D003815 ORTHO05D004580 7.1e-141 504.2 310 85.2
QL08p021520 Quercus lobata HOM05D003815 ORTHO05D004580 9.2e-141 503.8 284 87.7
Manes.03G110800 Manihot esculenta HOM05D003815 ORTHO05D004580 1.2e-140 503.4 283 88.7
Sabra16G0263000 Salix brachista HOM05D003815 ORTHO05D004580 1.6e-140 503.1 307 82.1
SGA_v2.0_scaffold73G24269 Striga asiatica HOM05D003815 ORTHO05D004580 1.6e-140 503.1 305 84.9
MSTRG.15225 Avicennia marina HOM05D003815 ORTHO05D004580 2.1e-140 502.7 307 82.1
Solyc10g006980.3 Solanum lycopersicum HOM05D003815 ORTHO05D004580 2.1e-140 502.7 284 88.0
TWI38G0676 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 2.1e-140 502.7 285 86.7
QL05p086088 Quercus lobata HOM05D003815 ORTHO05D004580 2.7e-140 502.3 284 87.7
EL10Ac4g08152 Beta vulgaris HOM05D003815 ORTHO05D004580 3.5e-140 501.9 310 80.3
Nitab4.5_0002383g0120 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.5e-140 501.9 308 84.4
Thecc.07G083700 Theobroma cacao HOM05D003815 ORTHO05D004580 4.6e-140 501.5 310 83.5
Peaxi162Scf00027g02616 Petunia axillaris HOM05D003815 ORTHO05D004580 1.0e-139 500.4 281 88.6
PGR004G1265 Punica granatum HOM05D003815 ORTHO05D004580 1.3e-139 500.0 310 82.6
Sc07g0002580 Simmondsia chinensis HOM05D003815 ORTHO05D004580 3.0e-139 498.8 308 84.4
DCAR_014380 Daucus carota HOM05D003815 ORTHO05D004580 3.9e-139 498.4 307 82.7
Sabra11G0104500 Salix brachista HOM05D003815 ORTHO05D004580 3.9e-139 498.4 307 81.1
CAN.G162.63 Capsicum annuum HOM05D003815 ORTHO05D004580 8.6e-139 497.3 283 86.9
Nn1g04083 Nelumbo nucifera HOM05D003815 ORTHO05D004580 8.6e-139 497.3 310 80.3
Atru.chr2.2652 Acer truncatum HOM05D003815 ORTHO05D004580 2.5e-138 495.7 310 80.6
Nitab4.5_0000207g0160 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.3e-138 495.4 307 82.1
TWI38G0767 Tripterygium wilfordii HOM05D003815 ORTHO05D004580 3.3e-138 495.4 284 86.6
Prupe.4G183000 Prunus persica HOM05D003815 ORTHO05D004580 4.3e-138 495.0 310 81.6
CARHR043220 Cardamine hirsuta HOM05D003815 ORTHO05D004580 1.2e-137 493.4 283 84.8
AUR62029379 Chenopodium quinoa HOM05D003815 ORTHO05D004580 1.2e-137 493.4 310 79.0
AL1G61340 Arabidopsis lyrata HOM05D003815 ORTHO05D004580 1.6e-137 493.0 307 81.1
Sp1g39560 Schrenkiella parvula HOM05D003815 ORTHO05D004580 2.8e-137 492.3 307 80.8
Carub.0001s4215 Capsella rubella HOM05D003815 ORTHO05D004580 3.6e-137 491.9 287 84.7
Gohir.A04G029700 Gossypium hirsutum HOM05D003815 ORTHO05D004580 3.6e-137 491.9 307 79.8
Nitab4.5_0001551g0080 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.6e-137 491.9 283 85.5
Nitab4.5_0003688g0100 Nicotiana tabacum HOM05D003815 ORTHO05D004580 3.6e-137 491.9 283 85.2
AT1G53000 Arabidopsis thaliana HOM05D003815 ORTHO05D004580 4.7e-137 491.5 307 79.8
ECA238G0528 Erigeron canadensis HOM05D003815 ORTHO05D004580 4.7e-137 491.5 286 85.0
Hund02213 Selenicereus undatus HOM05D003815 ORTHO05D004580 1.1e-136 490.3 310 80.0
Cc05_g12120 Coffea canephora HOM05D003815 ORTHO05D004580 1.4e-136 490.0 307 82.4
THA.LOC104818073 Tarenaya hassleriana HOM05D003815 ORTHO05D004580 1.4e-136 490.0 307 80.1
Lsat_1_v5_gn_7_105160 Lactuca sativa HOM05D003815 ORTHO05D004580 1.8e-136 489.6 308 79.5
BcaB02g10966 Brassica carinata HOM05D003815 ORTHO05D004580 2.4e-136 489.2 307 79.2
MD03G1226400 Malus domestica HOM05D003815 ORTHO05D004580 2.4e-136 489.2 285 85.6
Thhalv10011698m.g Eutrema salsugineum HOM05D003815 ORTHO05D004580 3.1e-136 488.8 287 83.3
A08p01870 Brassica napus HOM05D003815 ORTHO05D004580 4.0e-136 488.4 285 83.9
Gorai.009G389800 Gossypium raimondii HOM05D003815 ORTHO05D004580 4.0e-136 488.4 283 84.5
BraA08t32239Z Brassica rapa HOM05D003815 ORTHO05D004580 5.2e-136 488.0 283 84.1
Glyma.12G151500 Glycine max HOM05D003815 ORTHO05D004580 5.2e-136 488.0 285 84.6
Gohir.D05G357300 Gossypium hirsutum HOM05D003815 ORTHO05D004580 6.9e-136 487.6 283 84.5
BcaC01g01350 Brassica carinata HOM05D003815 ORTHO05D004580 8.9e-136 487.3 285 83.5
C03p90950 Brassica napus HOM05D003815 ORTHO05D004580 8.9e-136 487.3 285 83.5
BolC3t21419H Brassica oleracea HOM05D003815 ORTHO05D004580 8.9e-136 487.3 285 83.5
Glyma.06G245100 Glycine max HOM05D003815 ORTHO05D004580 8.9e-136 487.3 309 83.5
Lalb_Chr03g0030621 Lupinus albus HOM05D003815 ORTHO05D004580 8.9e-136 487.3 283 84.8
MBI07_g32649_MAGBIO Magnolia biondii HOM05D003815 ORTHO05D004580 8.9e-136 487.3 317 78.5
MELO3C016515.2 Cucumis melo HOM05D003815 ORTHO05D004580 2.6e-135 485.7 307 79.8
BcaB04g17128 Brassica carinata HOM05D003815 ORTHO05D004580 5.8e-135 484.6 285 82.8
Lj3g0026961 Lotus japonicus HOM05D003815 ORTHO05D004580 5.8e-135 484.6 307 82.4
MD11G1244700 Malus domestica HOM05D003815 ORTHO05D004580 5.8e-135 484.6 307 80.1
RcHm_v2.0_Chr5g0033991 Rosa chinensis HOM05D003815 ORTHO05D004580 7.6e-135 484.2 310 80.3
CsaV3_3G006290 Cucumis sativus L. HOM05D003815 ORTHO05D004580 1.3e-134 483.4 307 78.8
Duzib170G0119 Durio zibethinus HOM05D003815 ORTHO05D004580 1.3e-134 483.4 285 82.5
Aqoxy1G02432 Aquilegia oxysepala HOM05D003815 ORTHO05D004580 1.7e-134 483.0 311 80.7
HanXRQChr11g0328431 Helianthus annuus HOM05D003815 ORTHO05D004580 1.7e-134 483.0 311 79.4
Phvul.011G157900 Phaseolus vulgaris HOM05D003815 ORTHO05D004580 1.7e-134 483.0 301 82.1
Potri.001G400900 Populus trichocarpa HOM05D003815 ORTHO05D004580 1.7e-134 483.0 307 79.8
Aa31LG10G2090 Aethionema arabicum HOM05D003815 ORTHO05D004580 2.9e-134 482.3 285 83.2
COL.COLO4_09397 Corchorus olitorius HOM05D003815 ORTHO05D004580 2.9e-134 482.3 303 82.8
A05p18730 Brassica napus HOM05D003815 ORTHO05D004580 3.8e-134 481.9 307 78.2
Psat5g229040 Pisum sativum HOM05D003815 ORTHO05D004580 3.8e-134 481.9 284 83.5
arahy.Tifrunner.gnm1.ann1.46T9HD Arachis hypogaea HOM05D003815 ORTHO05D004580 1.4e-133 479.9 285 83.5
Lj3g0002488 Lotus japonicus HOM05D003815 ORTHO05D004580 2.4e-133 479.2 283 83.4
Sed0012787 Sechium edule HOM05D003815 ORTHO05D004580 2.4e-133 479.2 307 79.8
TPR.G454 Trifolium pratense HOM05D003815 ORTHO05D004580 2.4e-133 479.2 285 83.9
FAN16G0735 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.2e-133 478.8 285 83.5
Ah.06g184010 Amaranthus hybridus HOM05D003815 ORTHO05D004580 1.2e-132 476.9 303 78.9
Medtr1g057850 Medicago truncatula HOM05D003815 ORTHO05D004580 1.6e-132 476.5 283 82.3
FAN11G0414 Fragaria x ananassa HOM05D003815 ORTHO05D004580 2.7e-132 475.7 285 82.8
PSO541G6182 Papaver somniferum HOM05D003815 ORTHO05D004580 3.5e-132 475.3 281 82.9
C06p14350 Brassica napus HOM05D003815 ORTHO05D004580 1.0e-131 473.8 301 78.7
BraA05t20769Z Brassica rapa HOM05D003815 ORTHO05D004580 1.3e-131 473.4 279 82.4
PSO675G7971 Papaver somniferum HOM05D003815 ORTHO05D004580 1.3e-131 473.4 281 82.6
Lalb_Chr01g0006511 Lupinus albus HOM05D003815 ORTHO05D004580 1.7e-131 473.0 283 82.7
CAN.G1110.56 Capsicum annuum HOM05D003815 ORTHO05D004580 2.3e-131 472.6 267 86.9
Actinidia09679 Actinidia chinensis HOM05D003815 ORTHO05D004580 3.0e-131 472.2 281 85.8
unitig_899.g15563 Utricularia gibba HOM05D003815 ORTHO05D004580 3.9e-131 471.9 285 80.7
ATR0605G309 Amborella trichopoda HOM05D003815 ORTHO05D004580 5.1e-131 471.5 285 81.8
GSVIVG01005203001 Vitis vinifera HOM05D003815 ORTHO05D004580 2.5e-130 469.2 285 81.8
FAN21G2274 Fragaria x ananassa HOM05D003815 ORTHO05D004580 3.3e-130 468.8 285 83.2
Cfa000456 Carpinus fangiana HOM05D003815 ORTHO05D004580 1.3e-129 466.8 303 76.9
Lsat_1_v5_gn_7_21261 Lactuca sativa HOM05D003815 ORTHO05D004580 4.8e-129 464.9 285 81.8
Actinidia01882 Actinidia chinensis HOM05D003815 ORTHO05D004580 6.2e-129 464.5 283 80.9
QL05p040244 Quercus lobata HOM05D003815 ORTHO05D004580 1.4e-128 463.4 286 79.7
CiPaw.09G059900 Carya illinoinensis HOM05D003815 ORTHO05D004580 4.0e-128 461.8 282 79.8
Lj8A54T73 Lonicera japonica HOM05D003815 ORTHO05D004580 4.0e-128 461.8 334 74.3
Peaxi162Scf00069g01341 Petunia axillaris HOM05D003815 ORTHO05D004580 4.0e-128 461.8 281 83.3
CDE10G1101 Ceratophyllum demersum HOM05D003815 ORTHO05D004580 5.3e-128 461.5 283 80.9
AUR62034260 Chenopodium quinoa HOM05D003815 ORTHO05D004580 2.6e-127 459.1 283 80.6
ClCG10G006920 Citrullus lanatus HOM05D003815 ORTHO05D004580 2.6e-127 459.1 320 75.0
HPP92_021319 Vanilla planifolia HOM05D003815 ORTHO05D004580 2.6e-127 459.1 309 76.1
RcHm_v2.0_Chr5g0008351 Rosa chinensis HOM05D003815 ORTHO05D004580 2.2e-126 456.1 306 76.5
Lj1A1206T62 Lonicera japonica HOM05D003815 ORTHO05D004580 6.4e-126 454.5 303 75.9
SEGI_36185 Sequoiadendron giganteum HOM05D003815 ORTHO05D004580 1.9e-125 453.0 303 74.3
SalBow8G0761 Salvia bowleyana HOM05D003815 ORTHO05D004580 4.2e-125 451.8 276 81.9
Haze_09417 Corylus avellana HOM05D003815 ORTHO05D004580 7.9e-124 447.6 392 66.3
Duzib213G0989 Durio zibethinus HOM05D003815 ORTHO05D004580 1.3e-123 446.8 310 78.4
arahy.Tifrunner.gnm1.ann1.NKF69P Arachis hypogaea HOM05D003815 ORTHO05D004580 5.1e-123 444.9 287 78.4
Os05g0561500 Oryza sativa ssp. japonica HOM05D003815 ORTHO05D004580 6.7e-123 444.5 307 73.6
Zm00001eb343610 Zea mays HOM05D003815 ORTHO05D004580 1.9e-122 443.0 307 71.7
SGA_v2.0_scaffold34G13823 Striga asiatica HOM05D003815 ORTHO05D004580 1.7e-118 429.9 248 86.3
FAN25G2093 Fragaria x ananassa HOM05D003815 ORTHO05D004580 4.6e-116 421.8 256 82.0
Rhsim06G0197600 Rhododendron simsii HOM05D003815 ORTHO05D004580 4.6e-116 421.8 221 93.7
BcaC08g44025 Brassica carinata HOM05D003815 ORTHO05D004580 3.9e-115 418.7 279 75.6
CiPaw.11G168500 Carya illinoinensis HOM05D003815 ORTHO05D004580 1.1e-114 417.2 221 91.0
Haze_06461 Corylus avellana HOM05D003815 ORTHO05D004580 8.2e-113 411.0 281 74.7
Prupe.4G047000 Prunus persica HOM05D003815 ORTHO05D004580 1.4e-112 410.2 254 79.1
Pp3c7_2170 Physcomitrium patens HOM05D003815 ORTHO05D004580 5.5e-109 398.3 287 66.9
Actinidia12813 Actinidia chinensis HOM05D003815 ORTHO05D004580 7.1e-109 397.9 316 69.6
Ca_12190_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.3e-109 397.5 218 87.6
Ca_30578_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 9.3e-109 397.5 218 87.6
AagrBONN_evm.TU.Sc2ySwM_344.3202 Anthoceros agrestis HOM05D003815 ORTHO05D004580 5.1e-107 391.7 250 74.4
Mapoly0026s0027 Marchantia polymorpha HOM05D003815 ORTHO05D004580 3.3e-106 389.0 273 68.9
SMO196G0043 Selaginella moellendorffii HOM05D003815 ORTHO05D004580 1.1e-104 384.0 251 73.3
Dinv40557 Davidia involucrata HOM05D003815 ORTHO05D004580 3.2e-101 372.5 200 89.0
FvH4_3g20180 Fragaria vesca HOM05D003815 ORTHO05D004580 2.2e-97 359.8 217 81.6
CBR_g31446 Chara braunii HOM05D003815 ORTHO05D004580 1.4e-96 357.1 289 61.6
PGSC0003DMG402012419 Solanum tuberosum HOM05D003815 ORTHO05D004580 6.9e-96 354.8 215 83.3
Oeu060549.1 Olea europaea HOM05D003815 ORTHO05D004580 2.6e-90 336.3 208 81.7
Duzib064G0003 Durio zibethinus HOM05D003815 ORTHO05D004580 9.7e-90 334.3 182 89.6
Cpa.g.sc80.53 Carica papaya HOM05D003815 ORTHO05D004580 3.7e-89 332.4 182 87.4
Duzib064G0004 Durio zibethinus HOM05D003815 ORTHO05D004580 8.2e-81 304.7 174 85.1
Eucgr.F01114 Eucalyptus grandis HOM05D003815 ORTHO05D004580 1.2e-79 300.8 221 73.3
PSO017G1411 Papaver somniferum HOM05D003815 ORTHO05D004580 4.2e-77 292.4 183 77.6
Lj3g0013472 Lotus japonicus HOM05D003815 ORTHO05D004580 7.0e-72 275.0 152 87.5
AagrBONN_evm.TU.Sc2ySwM_340.276 Anthoceros agrestis HOM05D003815 ORTHO05D004580 2.6e-66 256.5 194 66.0
ATR0730G188 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.7e-62 243.8 146 81.5
BcaB07g33367 Brassica carinata HOM05D003815 ORTHO05D004580 1.8e-59 233.8 209 62.2
Pp3c11_23350 Physcomitrium patens HOM05D003815 ORTHO05D004580 4.1e-48 196.1 244 47.1
C07p00250 Brassica napus HOM05D003815 ORTHO05D004580 2.7e-47 193.4 119 75.6
Haze_06417 Corylus avellana HOM05D003815 ORTHO05D004580 8.6e-46 188.3 158 63.9
Haze_06421 Corylus avellana HOM05D003815 ORTHO05D004580 1.2e-44 184.5 136 71.3
Lj8A156T78 Lonicera japonica HOM05D003815 ORTHO05D004580 7.5e-42 175.3 177 55.9
BolC7t40476H Brassica oleracea HOM05D003815 ORTHO05D004580 5.4e-40 169.1 105 76.2
Hma1.2p1_0000F.1_g000160 Hydrangea macrophylla HOM05D003815 ORTHO05D004580 1.1e-37 161.4 86 86.0
BcaC06g36757 Brassica carinata HOM05D003815 ORTHO05D004580 2.6e-34 150.2 96 74.0
MCO07G610 Micromonas commoda HOM05D003815 ORTHO05D004580 8.6e-30 135.2 301 32.9
Actinidia05634 Actinidia chinensis HOM05D003815 ORTHO05D004580 1.5e-29 134.4 80 81.2
Lj3g0015923 Lotus japonicus HOM05D003815 ORTHO05D004580 3.1e-27 126.7 196 42.9
BolC6t36614H Brassica oleracea HOM05D003815 ORTHO05D004580 2.6e-26 123.6 86 73.3
CBR_g29613 Chara braunii HOM05D003815 ORTHO05D004580 5.8e-26 122.5 170 42.4
BcaC08g43686 Brassica carinata HOM05D003815 ORTHO05D004580 5.4e-24 115.9 66 83.3
BolC6t36186H Brassica oleracea HOM05D003815 ORTHO05D004580 5.4e-24 115.9 66 83.3
PSO017G7235 Papaver somniferum HOM05D003815 ORTHO05D004580 3.8e-17 93.2 53 81.1
Sopen05g017440 Solanum pennellii HOM05D003815 ORTHO05D004580 8.4e-17 92.0 158 39.9
Lj8C156T6 Lonicera japonica HOM05D003815 ORTHO05D004580 5.4e-16 89.4 87 66.7
Sopen05g018740 Solanum pennellii HOM05D000002 ORTHO05D000001 5.4e-16 89.4 85 56.5
Ca_12192_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.5e-15 86.7 90 70.0
Ca_30580_v3 Cicer arietinum L. HOM05D003815 ORTHO05D004580 3.5e-15 86.7 90 70.0
Oeu044430.1 Olea europaea HOM05D003815 ORTHO05D004580 3.5e-15 86.7 79 57.0
BolC9t59438H Brassica oleracea HOM05D003815 ORTHO05D004580 1.1e-11 75.1 92 45.7
ATR0730G237 Amborella trichopoda HOM05D003815 ORTHO05D004580 1.8e-11 74.3 65 61.5
Solyc04g079020.4 Solanum lycopersicum HOM05D003815 ORTHO05D004580 1.5e-10 71.2 110 40.9
C09p66180 Brassica napus HOM05D003815 ORTHO05D004580 5.8e-10 69.3 103 39.8
Oeu026881.1 Olea europaea HOM05D001611 ORTHO05D001464 3.8e-09 66.6 57 54.4
COL.COLO4_31682 Corchorus olitorius HOM05D000007 ORTHO05D000017 1.4e-08 64.7 43 76.7
COL.COLO4_36023 Corchorus olitorius HOM05D006127 ORTHO05D161883 5.4e-08 62.8 53 64.2
Actinidia16545 Actinidia chinensis HOM05D003815 ORTHO05D056144 4.6e-07 59.7 53 60.4
Actinidia24031 Actinidia chinensis HOM05D003815 ORTHO05D004580 4.6e-07 59.7 34 79.4
Lj2g0024488 Lotus japonicus HOM05D003815 ORTHO05D004580 6.7e-06 55.8 38 71.1
Solyc04g079010.1 Solanum lycopersicum HOM05D003815 ORTHO05D004580 6.7e-06 55.8 31 74.2


User provided reference genes

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