Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031475 Camellia sinensis var. sinensis HOM05D003082 ORTHO05D003497 7.5e-29 129.8 64 100.0
CSS0037921 Camellia sinensis var. sinensis HOM05D003082 ORTHO05D003497 1.5e-08 62.4 39 74.4
Actinidia01599 Actinidia chinensis HOM05D003082 ORTHO05D003497 5.6e-08 60.5 38 68.4
TAR374G0282 Trochodendron aralioides HOM05D003082 ORTHO05D003497 3.6e-07 57.8 40 60.0
Cc02_g12480 Coffea canephora HOM05D003082 ORTHO05D003497 6.2e-07 57.0 45 60.0
Rhsim10G0103000 Rhododendron simsii HOM05D003082 ORTHO05D003497 6.2e-07 57.0 39 66.7
RhsimUnG0060500 Rhododendron simsii HOM05D003082 ORTHO05D003497 6.2e-07 57.0 39 66.7
TWI60G0785 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 1.4e-06 55.8 37 62.2
Nitab4.5_0003465g0050 Nicotiana tabacum HOM05D003082 ORTHO05D003497 1.8e-06 55.5 37 62.2
vmacro12219 Vaccinium macrocarpon HOM05D003082 ORTHO05D003497 1.8e-06 55.5 42 59.5
GSVIVG01000052001 Vitis vinifera HOM05D003082 ORTHO05D003497 1.8e-06 55.5 38 60.5
Sed0014317 Sechium edule HOM05D003082 ORTHO05D003497 3.1e-06 54.7 36 63.9
CsaV3_5G024250 Cucumis sativus L. HOM05D003082 ORTHO05D003497 4.0e-06 54.3 38 60.5
Nn2g12687 Nelumbo nucifera HOM05D003082 ORTHO05D003497 4.0e-06 54.3 34 67.6
MSTRG.7294 Avicennia marina HOM05D003082 ORTHO05D003497 5.2e-06 53.9 39 64.1
CiPaw.05G244300 Carya illinoinensis HOM05D003082 ORTHO05D003497 5.2e-06 53.9 39 59.0
ClCG01G008760 Citrullus lanatus HOM05D003082 ORTHO05D003497 6.8e-06 53.5 41 53.7
Dinv20511 Davidia involucrata HOM05D003082 ORTHO05D003497 6.8e-06 53.5 38 63.2
Dinv20531 Davidia involucrata HOM05D003082 ORTHO05D003497 6.8e-06 53.5 38 63.2
Nn7g36916 Nelumbo nucifera HOM05D003082 ORTHO05D003497 6.8e-06 53.5 34 67.6
Nitab4.5_0003574g0100 Nicotiana tabacum HOM05D003082 ORTHO05D003497 6.8e-06 53.5 36 61.1
Peaxi162Scf00588g01011 Petunia axillaris HOM05D003082 ORTHO05D003497 6.8e-06 53.5 36 63.9
TWI15G0329 Tripterygium wilfordii HOM05D003082 ORTHO05D003497 6.8e-06 53.5 36 63.9
TAR371G0008 Trochodendron aralioides HOM05D003082 ORTHO05D003497 6.8e-06 53.5 36 63.9
Hma1.2p1_0331F.1_g127550 Hydrangea macrophylla HOM05D003082 ORTHO05D003497 8.9e-06 53.1 36 63.9


User provided reference genes

Program Settings