Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031474 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D113499 6.9e-33 143.3 67 100.0
CSS0014546 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D113506 1.1e-25 119.4 67 85.1
CSS0011591 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0019652 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0025056 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0025298 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0034214 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0048348 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 3.1e-25 117.9 67 85.1
CSS0007532 Camellia sinensis var. sinensis HOM05D015567 ORTHO05D001906 4.5e-24 114.0 67 82.1
CSS0020180 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 6.9e-09 63.5 29 96.6
CSS0012615 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 9.0e-09 63.2 29 93.1
CSS0028716 Camellia sinensis var. sinensis HOM05D000555 ORTHO05D001906 9.0e-09 63.2 29 93.1
CANSAT56G1713 Cannabis sativa HOM05D000555 ORTHO05D001906 5.8e-08 60.5 29 86.2
Rhsim13G0140500 Rhododendron simsii HOM05D000555 ORTHO05D001906 1.0e-07 59.7 29 86.2
vmacro03607 Vaccinium macrocarpon HOM05D000555 ORTHO05D001906 1.0e-07 59.7 29 89.7
QL05p067756 Quercus lobata HOM05D000555 ORTHO05D001906 1.7e-07 58.9 29 86.2
RcHm_v2.0_Chr5g0000481 Rosa chinensis HOM05D000555 ORTHO05D001906 1.7e-07 58.9 29 89.7
Dinv04395 Davidia involucrata HOM05D000555 ORTHO05D001906 2.9e-07 58.2 29 79.3
Oeu025966.1 Olea europaea HOM05D000555 ORTHO05D001906 2.9e-07 58.2 29 86.2
Sp2g12400 Schrenkiella parvula HOM05D000555 ORTHO05D001906 2.9e-07 58.2 29 82.8
Ah.09g233870 Amaranthus hybridus HOM05D000555 ORTHO05D001906 3.8e-07 57.8 29 79.3
Migut.M01445 Erythranthe guttata HOM05D000555 ORTHO05D001906 3.8e-07 57.8 29 86.2
FAN25G3005 Fragaria x ananassa HOM05D000555 ORTHO05D001906 3.8e-07 57.8 31 83.9
Cpa.g.sc27.226 Carica papaya HOM05D000555 ORTHO05D001906 4.9e-07 57.4 29 82.8
MD05G1361800 Malus domestica HOM05D000555 ORTHO05D001906 4.9e-07 57.4 29 79.3
MD10G1339300 Malus domestica HOM05D000555 ORTHO05D001906 4.9e-07 57.4 29 79.3
Prupe.4G003600 Prunus persica HOM05D000555 ORTHO05D001906 4.9e-07 57.4 29 79.3
TPR.G5976 Trifolium pratense HOM05D000555 ORTHO05D001906 4.9e-07 57.4 31 80.6
FAN21G3189 Fragaria x ananassa HOM05D000555 ORTHO05D001906 6.5e-07 57.0 29 86.2
Potri.006G004750 Populus trichocarpa HOM05D000555 ORTHO05D001906 6.5e-07 57.0 29 82.8
Potri.016G005400 Populus trichocarpa HOM05D000555 ORTHO05D001906 6.5e-07 57.0 29 82.8
Sabra06G0004000 Salix brachista HOM05D000555 ORTHO05D001906 6.5e-07 57.0 29 82.8
Thhalv10000739m.g Eutrema salsugineum HOM05D000555 ORTHO05D001906 8.4e-07 56.6 29 79.3
FvH4_3g00310 Fragaria vesca HOM05D000555 ORTHO05D001906 8.4e-07 56.6 29 82.8
Lalb_Chr07g0176931 Lupinus albus HOM05D000555 ORTHO05D001906 8.4e-07 56.6 31 77.4
Sc17g0008000 Simmondsia chinensis HOM05D000555 ORTHO05D001906 8.4e-07 56.6 29 82.8
CiPaw.10G082000 Carya illinoinensis HOM05D000555 ORTHO05D001906 1.1e-06 56.2 29 79.3
CiPaw.09G108900 Carya illinoinensis HOM05D000555 ORTHO05D001906 1.4e-06 55.8 31 77.4
Ciclev10014035m.g Citrus clementina HOM05D000555 ORTHO05D001906 1.4e-06 55.8 29 82.8
Haze_07020 Corylus avellana HOM05D000555 ORTHO05D001906 1.4e-06 55.8 29 82.8
Oeu057018.1 Olea europaea HOM05D000555 ORTHO05D001906 1.4e-06 55.8 29 82.8
Ca_20991_v3 Cicer arietinum L. HOM05D000555 ORTHO05D001906 1.9e-06 55.5 31 74.2
Duzib192G0010 Durio zibethinus HOM05D000555 ORTHO05D001906 1.9e-06 55.5 29 79.3
Psat0s3798g0160 Pisum sativum HOM05D000555 ORTHO05D001906 1.9e-06 55.5 31 74.2
Actinidia02283 Actinidia chinensis HOM05D000555 ORTHO05D001906 2.5e-06 55.1 26 92.3
Carub.0008s0009 Capsella rubella HOM05D000555 ORTHO05D001906 2.5e-06 55.1 29 75.9
Lj2A256T100 Lonicera japonica HOM05D000555 ORTHO05D001906 2.5e-06 55.1 29 82.8
AL8G10260 Arabidopsis lyrata HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 75.9
BcaC03g16985 Brassica carinata HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 86.2
A02p31510 Brassica napus HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 86.2
C02p48870 Brassica napus HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 86.2
BolC2t10981H Brassica oleracea HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 86.2
BraA02t08154Z Brassica rapa HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 86.2
AUR62012854 Chenopodium quinoa HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 79.3
AUR62021811 Chenopodium quinoa HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 79.3
Medtr4g134080 Medicago truncatula HOM05D000555 ORTHO05D001906 3.2e-06 54.7 30 73.3
Phvul.003G087100 Phaseolus vulgaris HOM05D000555 ORTHO05D001906 3.2e-06 54.7 31 71.0
TAR624G0718 Trochodendron aralioides HOM05D000555 ORTHO05D001906 3.2e-06 54.7 29 75.9
VMungo1215G2808 Vigna mungo HOM05D000555 ORTHO05D001906 3.2e-06 54.7 31 71.0
CARHR173620 Cardamine hirsuta HOM05D000555 ORTHO05D001906 4.2e-06 54.3 29 75.9
arahy.Tifrunner.gnm1.ann1.AVE6NE Arachis hypogaea HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 72.4
arahy.Tifrunner.gnm1.ann1.M87LIL Arachis hypogaea HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 72.4
ClCG01G011160 Citrullus lanatus HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 72.4
MELO3C025570.2 Cucumis melo HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 72.4
CsaV3_1G015470 Cucumis sativus L. HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 72.4
Glyma.07G268200 Glycine max HOM05D000555 ORTHO05D001906 5.5e-06 53.9 31 71.0
Manes.09G083700 Manihot esculenta HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 79.3
Hund21131 Selenicereus undatus HOM05D000555 ORTHO05D001906 5.5e-06 53.9 29 79.3
THA.LOC104806739 Tarenaya hassleriana HOM05D000555 ORTHO05D001906 7.1e-06 53.5 29 79.3
Aa31sc219G80 Aethionema arabicum HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 75.9
EL10Ac8g20267 Beta vulgaris HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 75.9
Migut.H01632 Erythranthe guttata HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 75.9
Glyma.17G005500 Glycine max HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 72.4
Lj4g0005227 Lotus japonicus HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 72.4
Lalb_Chr20g0119541 Lupinus albus HOM05D000555 ORTHO05D001906 9.3e-06 53.1 31 67.7
Sabra16G0010300 Salix brachista HOM05D000555 ORTHO05D001906 9.3e-06 53.1 29 75.9


User provided reference genes

Program Settings