Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031450 Camellia sinensis var. sinensis HOM05D005057 ORTHO05D006570 1.7e-73 279.3 141 100.0
RcHm_v2.0_Chr5g0010551 Rosa chinensis HOM05D005057 ORTHO05D006570 5.3e-51 204.5 126 79.4
Hma1.2p1_0155F.1_g068170 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.2e-50 203.4 125 80.0
FvH4_4g20380 Fragaria vesca HOM05D005057 ORTHO05D006570 3.4e-50 201.8 125 78.4
FAN07G2484 Fragaria x ananassa HOM05D005057 ORTHO05D006570 7.6e-50 200.7 125 77.6
COL.COLO4_31315 Corchorus olitorius HOM05D005057 ORTHO05D006570 1.3e-49 199.9 125 75.2
Prupe.4G059900 Prunus persica HOM05D005057 ORTHO05D006570 1.3e-49 199.9 130 73.8
PSO063G4235 Papaver somniferum HOM05D005057 ORTHO05D006570 4.9e-49 198.0 131 71.0
QL05p046449 Quercus lobata HOM05D005057 ORTHO05D006570 1.1e-48 196.8 126 76.2
Rhsim13G0191300 Rhododendron simsii HOM05D005057 ORTHO05D006570 1.9e-48 196.1 120 80.0
Thecc.06G172400 Theobroma cacao HOM05D005057 ORTHO05D006570 2.4e-48 195.7 122 75.4
Gohir.A06G130800 Gossypium hirsutum HOM05D005057 ORTHO05D006570 3.2e-48 195.3 125 73.6
GSVIVG01021196001 Vitis vinifera HOM05D005057 ORTHO05D006570 3.2e-48 195.3 128 75.0
Actinidia16804 Actinidia chinensis HOM05D005057 ORTHO05D006570 4.2e-48 194.9 116 80.2
Duzib160G0357 Durio zibethinus HOM05D005057 ORTHO05D006570 4.2e-48 194.9 125 73.6
ClCG03G007800 Citrullus lanatus HOM05D005057 ORTHO05D006570 5.5e-48 194.5 126 74.6
FvH4_3g07940 Fragaria vesca HOM05D005057 ORTHO05D006570 7.1e-48 194.1 119 79.0
Gorai.010G158900 Gossypium raimondii HOM05D005057 ORTHO05D006570 7.1e-48 194.1 125 73.6
MBI06_g25988_MAGBIO Magnolia biondii HOM05D005057 ORTHO05D006570 7.1e-48 194.1 128 71.1
FAN11G1223 Fragaria x ananassa HOM05D005057 ORTHO05D006570 9.3e-48 193.7 119 79.0
MELO3C002642.2 Cucumis melo HOM05D005057 ORTHO05D006570 1.6e-47 193.0 126 73.0
CANSAT35G0522 Cannabis sativa HOM05D005057 ORTHO05D006570 3.5e-47 191.8 126 73.8
CsaV3_1G033430 Cucumis sativus L. HOM05D005057 ORTHO05D006570 3.5e-47 191.8 126 73.8
Haze_06250 Corylus avellana HOM05D005057 ORTHO05D006570 6.0e-47 191.0 126 74.6
Peaxi162Scf00261g01011 Petunia axillaris HOM05D005057 ORTHO05D006570 6.0e-47 191.0 119 75.6
MD10G1281300 Malus domestica HOM05D005057 ORTHO05D006570 7.9e-47 190.7 126 72.2
Nitab4.5_0000681g0220 Nicotiana tabacum HOM05D005057 ORTHO05D006570 3.0e-46 188.7 120 74.2
CAN.G370.63 Capsicum annuum HOM05D005057 ORTHO05D006570 3.9e-46 188.3 120 75.8
Sabra11G0046800 Salix brachista HOM05D005057 ORTHO05D006570 3.9e-46 188.3 129 69.0
Nitab4.5_0003322g0060 Nicotiana tabacum HOM05D005057 ORTHO05D006570 6.7e-46 187.6 119 75.6
Ciclev10014965m.g Citrus clementina HOM05D005057 ORTHO05D006570 1.1e-45 186.8 125 71.2
MSTRG.13217 Avicennia marina HOM05D005057 ORTHO05D006570 1.9e-45 186.0 129 69.8
CiPaw.09G069000 Carya illinoinensis HOM05D005057 ORTHO05D006570 1.9e-45 186.0 126 72.2
Sed0014368 Sechium edule HOM05D005057 ORTHO05D006570 1.9e-45 186.0 127 70.9
Sopen02g021880 Solanum pennellii HOM05D005057 ORTHO05D006570 1.9e-45 186.0 120 75.0
Nn1g09052 Nelumbo nucifera HOM05D005057 ORTHO05D006570 2.5e-45 185.7 124 74.2
Eucgr.D00512 Eucalyptus grandis HOM05D005057 ORTHO05D006570 4.3e-45 184.9 119 75.6
Aqoxy4G00443 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 5.6e-45 184.5 122 70.5
TWI38G0714 Tripterygium wilfordii HOM05D005057 ORTHO05D006570 7.4e-45 184.1 127 70.9
Manes.16G037800 Manihot esculenta HOM05D005057 ORTHO05D006570 2.8e-44 182.2 128 68.0
Cc02_g14710 Coffea canephora HOM05D005057 ORTHO05D006570 4.8e-44 181.4 119 73.9
HanXRQChr13g0397391 Helianthus annuus HOM05D005057 ORTHO05D006570 3.1e-43 178.7 127 70.9
Potri.011G065000 Populus trichocarpa HOM05D005057 ORTHO05D006570 3.1e-43 178.7 119 72.3
Migut.H01447 Erythranthe guttata HOM05D005057 ORTHO05D006570 6.9e-43 177.6 119 71.4
Lalb_Chr18g0059161 Lupinus albus HOM05D005057 ORTHO05D006570 4.5e-42 174.9 125 68.8
Medtr2g015860 Medicago truncatula HOM05D005057 ORTHO05D006570 4.5e-42 174.9 126 66.7
PGR004G2757 Punica granatum HOM05D005057 ORTHO05D006570 7.6e-42 174.1 126 67.5
Glyma.13G230500 Glycine max HOM05D005057 ORTHO05D006570 1.0e-41 173.7 122 68.0
arahy.Tifrunner.gnm1.ann1.E17GNY Arachis hypogaea HOM05D005057 ORTHO05D006570 3.8e-41 171.8 122 68.9
Lalb_Chr15g0089481 Lupinus albus HOM05D005057 ORTHO05D006570 3.8e-41 171.8 119 71.4
Psat1g199040 Pisum sativum HOM05D005057 ORTHO05D006570 3.8e-41 171.8 122 68.0
DCAR_004016 Daucus carota HOM05D005057 ORTHO05D006570 4.9e-41 171.4 119 70.6
Phvul.006G176700 Phaseolus vulgaris HOM05D005057 ORTHO05D006570 4.9e-41 171.4 126 65.9
Lj6g0017686 Lotus japonicus HOM05D005057 ORTHO05D006570 8.4e-41 170.6 122 69.7
arahy.Tifrunner.gnm1.ann1.9TM733 Arachis hypogaea HOM05D005057 ORTHO05D006570 1.1e-40 170.2 122 68.0
ECA236G3111 Erigeron canadensis HOM05D005057 ORTHO05D006570 1.9e-40 169.5 120 70.0
FAN16G2413 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.9e-40 169.5 119 71.4
TPR.G11697 Trifolium pratense HOM05D005057 ORTHO05D006570 2.5e-40 169.1 122 67.2
SGA_v2.0_scaffold307G48045 Striga asiatica HOM05D005057 ORTHO05D006570 3.2e-40 168.7 120 66.7
ATR0602G189 Amborella trichopoda HOM05D005057 ORTHO05D006570 1.2e-39 166.8 126 63.5
Sc12g0008060 Simmondsia chinensis HOM05D005057 ORTHO05D006570 4.6e-39 164.9 121 66.1
Atru.chr10.1683 Acer truncatum HOM05D005057 ORTHO05D006570 6.0e-39 164.5 167 53.9
AUR62036592 Chenopodium quinoa HOM05D005057 ORTHO05D006570 7.9e-39 164.1 119 65.5
HPP92_020184 Vanilla planifolia HOM05D005057 ORTHO05D006570 1.0e-38 163.7 125 63.2
unitig_22.g6754 Utricularia gibba HOM05D005057 ORTHO05D006570 1.5e-37 159.8 144 56.2
Oeu041787.3 Olea europaea HOM05D005057 ORTHO05D006570 3.3e-37 158.7 108 70.4
Hund21184 Selenicereus undatus HOM05D005057 ORTHO05D006570 5.7e-37 157.9 119 63.9
Hma1.2p1_0155F.1_g068180 Hydrangea macrophylla HOM05D005057 ORTHO05D006570 1.3e-36 156.8 92 83.7
Aa31LG9G13900 Aethionema arabicum HOM05D005057 ORTHO05D006570 1.6e-36 156.4 119 68.9
THA.LOC104814250 Tarenaya hassleriana HOM05D005057 ORTHO05D006570 1.6e-36 156.4 119 67.2
VMungo0540G0206 Vigna mungo HOM05D005057 ORTHO05D006570 1.6e-36 156.4 123 60.2
BcaB02g10615 Brassica carinata HOM05D005057 ORTHO05D006570 2.8e-36 155.6 119 66.4
A05p11560 Brassica napus HOM05D005057 ORTHO05D006570 6.3e-36 154.5 119 67.2
FAN25G1331 Fragaria x ananassa HOM05D005057 ORTHO05D006570 1.1e-35 153.7 92 80.4
vmacro03932 Vaccinium macrocarpon HOM05D005057 ORTHO05D006570 4.1e-35 151.8 215 43.3
Ah.09g233650 Amaranthus hybridus HOM05D005057 ORTHO05D006570 6.9e-35 151.0 126 58.7
Sp4g16440 Schrenkiella parvula HOM05D005057 ORTHO05D006570 1.2e-34 150.2 119 65.5
AL4G30000 Arabidopsis lyrata HOM05D005057 ORTHO05D006570 2.0e-34 149.4 119 64.7
Carub.0004s1572 Capsella rubella HOM05D005057 ORTHO05D006570 2.0e-34 149.4 119 64.7
Lj2A297G103 Lonicera japonica HOM05D005057 ORTHO05D006570 2.0e-34 149.4 92 77.2
CARHR128190 Cardamine hirsuta HOM05D005057 ORTHO05D006570 2.6e-34 149.1 119 64.7
EL10Ac8g20510 Beta vulgaris HOM05D005057 ORTHO05D006570 3.4e-34 148.7 109 62.4
AT2G34090 Arabidopsis thaliana HOM05D005057 ORTHO05D006570 5.9e-34 147.9 119 63.9
Lsat_1_v5_gn_7_23040 Lactuca sativa HOM05D005057 ORTHO05D006570 1.7e-33 146.4 104 68.3
Thhalv10016658m.g Eutrema salsugineum HOM05D005057 ORTHO05D006570 2.9e-33 145.6 119 63.9
Dinv04618 Davidia involucrata HOM05D005057 ORTHO05D006570 1.4e-32 143.3 126 60.3
C04p15030 Brassica napus HOM05D005057 ORTHO05D006570 1.9e-32 142.9 142 57.0
BraA05t20104Z Brassica rapa HOM05D005057 ORTHO05D006570 3.2e-32 142.1 147 54.4
BolC4t23078H Brassica oleracea HOM05D005057 ORTHO05D006570 4.2e-32 141.7 142 56.3
SalBow7G0088 Salvia bowleyana HOM05D005057 ORTHO05D006570 1.2e-31 140.2 88 76.1
Ca_00428_v3 Cicer arietinum L. HOM05D005057 ORTHO05D006570 6.1e-31 137.9 91 74.7
SMO142G0032 Selaginella moellendorffii HOM05D005057 ORTHO05D006570 5.1e-30 134.8 113 56.6
AagrBONN_evm.TU.Sc2ySwM_344.2851 Anthoceros agrestis HOM05D005057 ORTHO05D006570 2.5e-29 132.5 120 52.5
AUR62031175 Chenopodium quinoa HOM05D005057 ORTHO05D006570 3.3e-29 132.1 87 72.4
Mapoly0152s0011 Marchantia polymorpha HOM05D005057 ORTHO05D006570 1.0e-25 120.6 120 50.0
Pp3c16_13000 Physcomitrium patens HOM05D005057 ORTHO05D006570 6.5e-25 117.9 124 50.0
CDE10G0488 Ceratophyllum demersum HOM05D005057 ORTHO05D006570 1.9e-24 116.3 85 67.1
Cpa.g.sc7.56 Carica papaya HOM05D005057 ORTHO05D006570 9.7e-21 104.0 60 83.3
Aqoxy12s001 Aquilegia oxysepala HOM05D005057 ORTHO05D006570 2.8e-20 102.4 63 76.2
TAR626G1061 Trochodendron aralioides HOM05D005057 ORTHO05D006570 4.8e-20 101.7 60 83.3
Gohir.D06G136700 Gossypium hirsutum HOM05D005057 ORTHO05D006570 1.4e-19 100.1 125 44.8
PRCOL_00006187 Prasinoderma coloniale HOM05D005057 ORTHO05D006570 2.9e-17 92.4 129 35.7
Medtr2g015780 Medicago truncatula HOM05D005057 ORTHO05D006570 1.9e-16 89.7 62 69.4
MCO11G641 Micromonas commoda HOM05D005057 ORTHO05D006570 3.2e-16 89.0 116 44.8
Cre01.g033700 Chlamydomonas reinhardtii HOM05D005057 ORTHO05D006570 6.1e-15 84.7 124 40.3
arahy.Tifrunner.gnm1.ann1.XF9LE9 Arachis hypogaea HOM05D005057 ORTHO05D011377 8.2e-12 74.3 134 37.3
PSO063G0949 Papaver somniferum HOM05D005057 ORTHO05D006570 1.1e-11 73.9 43 74.4
MD05G1302500 Malus domestica HOM05D005057 ORTHO05D006570 9.1e-11 70.9 45 75.6


User provided reference genes

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