Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031445 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 1.6e-113 412.9 233 100.0
Haze_15401 Corylus avellana HOM05D005490 ORTHO05D006606 3.5e-44 182.6 218 59.2
Haze_15403 Corylus avellana HOM05D005490 ORTHO05D006606 3.5e-44 182.6 218 59.2
CSS0049924 Camellia sinensis var. sinensis HOM05D005490 ORTHO05D006606 5.1e-43 178.7 212 58.5
Lj7A69T47 Lonicera japonica HOM05D005490 ORTHO05D006606 6.7e-43 178.3 136 78.7
Dinv29986 Davidia involucrata HOM05D005490 ORTHO05D006606 4.3e-42 175.6 132 80.3
Dinv39848 Davidia involucrata HOM05D005490 ORTHO05D006606 9.7e-42 174.5 132 81.8
vmacro17955 Vaccinium macrocarpon HOM05D005490 ORTHO05D006606 9.7e-42 174.5 204 61.8
QL06p041379 Quercus lobata HOM05D005490 ORTHO05D006606 6.9e-40 168.3 120 83.3
Actinidia03792 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.4e-39 166.0 129 82.9
Oeu031525.2 Olea europaea HOM05D005490 ORTHO05D006606 3.8e-38 162.5 198 60.6
Hma1.2p1_0461F.1_g157800 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 1.4e-37 160.6 132 80.3
Oeu062437.1 Olea europaea HOM05D005490 ORTHO05D006606 1.9e-37 160.2 114 82.5
CiPaw.01G018200 Carya illinoinensis HOM05D005490 ORTHO05D006606 5.5e-37 158.7 118 78.8
Ciclev10025320m.g Citrus clementina HOM05D005490 ORTHO05D006606 5.5e-37 158.7 131 76.3
Cc07_g05990 Coffea canephora HOM05D005490 ORTHO05D006606 5.5e-37 158.7 113 83.2
Actinidia16483 Actinidia chinensis HOM05D005490 ORTHO05D006606 7.2e-37 158.3 200 55.0
TWI09G1398 Tripterygium wilfordii HOM05D005490 ORTHO05D006606 7.2e-37 158.3 115 81.7
DCAR_025733 Daucus carota HOM05D005490 ORTHO05D006606 6.1e-36 155.2 113 81.4
Nitab4.5_0002440g0010 Nicotiana tabacum HOM05D005490 ORTHO05D006606 6.1e-36 155.2 129 75.2
Peaxi162Scf00450g00420 Petunia axillaris HOM05D005490 ORTHO05D006606 6.1e-36 155.2 127 74.8
Nitab4.5_0002016g0110 Nicotiana tabacum HOM05D005490 ORTHO05D006606 1.0e-35 154.5 118 77.1
Sc03g0001580 Simmondsia chinensis HOM05D005490 ORTHO05D006606 1.8e-35 153.7 114 77.2
Manes.12G106800 Manihot esculenta HOM05D005490 ORTHO05D006606 3.9e-35 152.5 116 77.6
Cfa004023 Carpinus fangiana HOM05D005490 ORTHO05D006606 3.3e-34 149.4 115 78.3
FAN28G1226 Fragaria x ananassa HOM05D005490 ORTHO05D006606 3.3e-34 149.4 207 57.5
ClCG02G012530 Citrullus lanatus HOM05D005490 ORTHO05D006606 9.7e-34 147.9 131 70.2
Psat2g166360 Pisum sativum HOM05D005490 ORTHO05D006606 9.7e-34 147.9 132 75.8
Migut.H00433 Erythranthe guttata HOM05D005490 ORTHO05D006606 1.3e-33 147.5 118 74.6
Lsat_1_v5_gn_2_84101 Lactuca sativa HOM05D005490 ORTHO05D006606 1.3e-33 147.5 213 50.7
Aqoxy5G01228 Aquilegia oxysepala HOM05D005490 ORTHO05D006606 3.7e-33 146.0 124 70.2
HanXRQChr14g0442791 Helianthus annuus HOM05D005490 ORTHO05D006606 6.3e-33 145.2 131 73.3
Sed0007368 Sechium edule HOM05D005490 ORTHO05D006606 6.3e-33 145.2 114 75.4
GSVIVG01022130001 Vitis vinifera HOM05D005490 ORTHO05D006606 6.3e-33 145.2 129 75.2
Potri.007G044100 Populus trichocarpa HOM05D005490 ORTHO05D006606 2.4e-32 143.3 118 73.7
Gohir.D11G199100 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.1e-32 142.5 112 77.7
EL10Ac6g15745 Beta vulgaris HOM05D005490 ORTHO05D006606 5.3e-32 142.1 126 73.0
FAN19G0012 Fragaria x ananassa HOM05D005490 ORTHO05D006606 9.1e-32 141.4 113 78.8
MD02G1172100 Malus domestica HOM05D005490 ORTHO05D006606 1.2e-31 141.0 134 72.4
Nn5g30300 Nelumbo nucifera HOM05D005490 ORTHO05D006606 2.6e-31 139.8 133 67.7
Thecc.01G056300 Theobroma cacao HOM05D005490 ORTHO05D006606 2.6e-31 139.8 115 73.9
Thhalv10025018m.g Eutrema salsugineum HOM05D005490 ORTHO05D006606 3.4e-31 139.4 129 69.0
Duzib187G0068 Durio zibethinus HOM05D005490 ORTHO05D006606 4.5e-31 139.0 129 69.0
FvH4_1g16060 Fragaria vesca HOM05D005490 ORTHO05D006606 4.5e-31 139.0 113 77.9
Sp7g34780 Schrenkiella parvula HOM05D005490 ORTHO05D006606 7.7e-31 138.3 131 69.5
RcHm_v2.0_Chr2g0105671 Rosa chinensis HOM05D005490 ORTHO05D006606 1.3e-30 137.5 131 74.0
ATR1102G026 Amborella trichopoda HOM05D005490 ORTHO05D006606 5.0e-30 135.6 129 74.4
A01p01850 Brassica napus HOM05D005490 ORTHO05D006606 6.5e-30 135.2 114 74.6
BraA01t00174Z Brassica rapa HOM05D005490 ORTHO05D006606 6.5e-30 135.2 114 74.6
CDE08G0045 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 6.5e-30 135.2 127 66.1
THA.LOC104804216 Tarenaya hassleriana HOM05D005490 ORTHO05D006606 8.5e-30 134.8 112 73.2
C01p01990 Brassica napus HOM05D005490 ORTHO05D006606 1.1e-29 134.4 114 73.7
BolC1t00193H Brassica oleracea HOM05D005490 ORTHO05D006606 1.1e-29 134.4 114 73.7
Lj2g0003149 Lotus japonicus HOM05D005490 ORTHO05D006606 9.4e-29 131.3 113 70.8
Aa31LG6G13990 Aethionema arabicum HOM05D005490 ORTHO05D006606 2.7e-28 129.8 109 71.6
Eucgr.I00926 Eucalyptus grandis HOM05D005490 ORTHO05D006606 2.7e-28 129.8 128 69.5
Lalb_Chr05g0213291 Lupinus albus HOM05D005490 ORTHO05D006606 2.7e-28 129.8 112 71.4
Carub.0007s0317 Capsella rubella HOM05D005490 ORTHO05D006606 1.4e-27 127.5 110 70.9
Phvul.002G018900 Phaseolus vulgaris HOM05D005490 ORTHO05D006606 1.8e-27 127.1 131 62.6
AUR62001928 Chenopodium quinoa HOM05D005490 ORTHO05D006606 3.9e-27 125.9 109 70.6
Hma1.2p1_0461F.1_g157810 Hydrangea macrophylla HOM05D005490 ORTHO05D006606 5.1e-27 125.6 130 70.0
Zm00001eb019290 Zea mays HOM05D005490 ORTHO05D006606 1.5e-26 124.0 114 69.3
VMungo1215G3252 Vigna mungo HOM05D005490 ORTHO05D006606 2.0e-26 123.6 131 64.1
Sabra05G0112300 Salix brachista HOM05D005490 ORTHO05D006606 3.3e-26 122.9 137 64.2
AL7G13750 Arabidopsis lyrata HOM05D005490 ORTHO05D006606 5.7e-26 122.1 111 65.8
Glyma.01G186000 Glycine max HOM05D005490 ORTHO05D006606 1.3e-25 120.9 132 63.6
TPR.G30705 Trifolium pratense HOM05D005490 ORTHO05D006606 1.3e-25 120.9 134 68.7
Prupe.7G133300 Prunus persica HOM05D005490 ORTHO05D006606 1.4e-24 117.5 113 66.4
arahy.Tifrunner.gnm1.ann1.JF37M9 Arachis hypogaea HOM05D005490 ORTHO05D006606 2.4e-24 116.7 112 65.2
Gohir.A02G157300 Gossypium hirsutum HOM05D005490 ORTHO05D006606 4.1e-24 115.9 118 64.4
Glyma.11G056000 Glycine max HOM05D005490 ORTHO05D006606 1.7e-22 110.5 131 59.5
Hund16323 Selenicereus undatus HOM05D005490 ORTHO05D006606 2.2e-22 110.2 104 63.5
HPP92_004114 Vanilla planifolia HOM05D005490 ORTHO05D006606 2.9e-22 109.8 114 58.8
Gohir.A11G192400 Gossypium hirsutum HOM05D005490 ORTHO05D006606 1.1e-21 107.8 110 64.5
AT4G36980 Arabidopsis thaliana HOM05D005490 ORTHO05D006606 1.9e-21 107.1 112 61.6
CsaV3_2G016660 Cucumis sativus L. HOM05D005490 ORTHO05D006606 5.5e-21 105.5 78 74.4
MELO3C020875.2 Cucumis melo HOM05D005490 ORTHO05D006606 7.2e-21 105.1 78 73.1
Medtr5g017430 Medicago truncatula HOM05D005490 ORTHO05D006606 7.2e-21 105.1 111 67.6
Gorai.007G213300 Gossypium raimondii HOM05D005490 ORTHO05D006606 9.4e-21 104.8 110 63.6
TAR381G1012 Trochodendron aralioides HOM05D005490 ORTHO05D006606 4.7e-20 102.4 96 77.1
CARHR245520 Cardamine hirsuta HOM05D005490 ORTHO05D006606 1.0e-19 101.3 128 60.2
arahy.Tifrunner.gnm1.ann1.5GG3L5 Arachis hypogaea HOM05D005490 ORTHO05D006606 1.4e-19 100.9 113 59.3
Atru.chr3.327 Acer truncatum HOM05D005490 ORTHO05D006606 5.2e-19 99.0 79 74.7
CDE06G1923 Ceratophyllum demersum HOM05D005490 ORTHO05D006606 1.1e-18 97.8 96 59.4
ECA238G0711 Erigeron canadensis HOM05D005490 ORTHO05D006606 1.5e-18 97.4 111 60.4
Gorai.003G025100 Gossypium raimondii HOM05D005490 ORTHO05D006606 2.6e-18 96.7 113 60.2
Actinidia36494 Actinidia chinensis HOM05D005490 ORTHO05D006606 3.3e-18 96.3 78 75.6
Rhsim08G0100400 Rhododendron simsii HOM05D005490 ORTHO05D006606 9.7e-18 94.7 78 71.8
Sabra07G0038800 Salix brachista HOM05D005490 ORTHO05D006606 9.7e-18 94.7 79 69.6
PSO170G3823 Papaver somniferum HOM05D005490 ORTHO05D006606 2.2e-17 93.6 79 68.4
PSO210G6251 Papaver somniferum HOM05D005490 ORTHO05D006606 2.2e-17 93.6 79 68.4
CAN.G660.7 Capsicum annuum HOM05D005490 ORTHO05D006606 2.8e-17 93.2 80 67.5
Solyc02g090850.3 Solanum lycopersicum HOM05D005490 ORTHO05D006606 4.8e-17 92.4 77 68.8
PGSC0003DMG400004042 Solanum tuberosum HOM05D005490 ORTHO05D006606 4.8e-17 92.4 77 68.8
CANSAT01G1717 Cannabis sativa HOM05D005490 ORTHO05D006606 2.4e-16 90.1 78 67.9
COL.COLO4_11415 Corchorus olitorius HOM05D005490 ORTHO05D006606 3.1e-16 89.7 76 72.4
Gohir.D03G023600 Gossypium hirsutum HOM05D005490 ORTHO05D006606 5.3e-16 89.0 79 70.9
SGA_v2.0_scaffold15G07303 Striga asiatica HOM05D005490 ORTHO05D006606 1.6e-15 87.4 72 70.8
BcaNung02520 Brassica carinata HOM05D005490 ORTHO05D006606 2.0e-15 87.0 86 62.8
AUR62003882 Chenopodium quinoa HOM05D005490 ORTHO05D006606 2.0e-15 87.0 72 68.1
HPP92_004074 Vanilla planifolia HOM05D005490 ORTHO05D006606 1.7e-14 84.0 93 54.8
SEGI_41077 Sequoiadendron giganteum HOM05D005490 ORTHO05D006606 5.0e-14 82.4 118 50.0
CBR_g38045 Chara braunii HOM05D005490 ORTHO05D000004 6.5e-14 82.0 139 50.4
Os03g0395900 Oryza sativa ssp. japonica HOM05D005490 ORTHO05D006606 1.5e-13 80.9 75 66.7
MD15G1284300 Malus domestica HOM05D005490 ORTHO05D006606 4.2e-13 79.3 94 59.6
Ah.03g145080 Amaranthus hybridus HOM05D005490 ORTHO05D006606 7.2e-13 78.6 74 60.8
Ca_24770_v3 Cicer arietinum L. HOM05D005490 ORTHO05D006606 4.7e-12 75.9 217 43.8
Actinidia12052 Actinidia chinensis HOM05D005490 ORTHO05D006606 9.1e-08 61.6 80 53.8
unitig_899.g14663 Utricularia gibba HOM05D005490 ORTHO05D006606 1.2e-07 61.2 97 46.4


User provided reference genes

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