Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.4e-153 546.2 264 100.0
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.0e-100 370.5 318 62.3
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 4.2e-94 348.6 336 57.4
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 9.4e-94 347.4 320 59.1
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 1.6e-93 346.7 325 58.8
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.1e-93 346.3 336 56.8
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 4.0e-92 342.0 327 56.6
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 4.0e-92 342.0 327 58.1
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 5.2e-92 341.7 308 60.7
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-91 340.5 316 58.5
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.0e-91 339.7 320 59.7
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.5e-91 337.8 316 58.2
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 9.8e-91 337.4 316 58.2
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 2.2e-90 336.3 314 56.4
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 3.1e-89 332.4 327 57.5
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 4.1e-89 332.0 327 57.2
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 4.1e-89 332.0 344 54.1
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.4e-89 331.6 337 55.2
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 3.5e-88 328.9 327 55.7
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 7.7e-88 327.8 321 56.7
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.7e-88 327.8 316 56.6
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 1.0e-87 327.4 333 54.7
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.7e-87 326.6 322 55.6
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 1.7e-87 326.6 321 55.1
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 2.9e-87 325.9 330 55.2
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 5.0e-87 325.1 330 54.8
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.1e-86 323.9 321 54.8
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 2.5e-86 322.8 333 55.9
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 4.2e-86 322.0 324 55.2
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 1.6e-85 320.1 291 60.8
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 2.1e-85 319.7 325 54.2
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 8.0e-85 317.8 305 56.7
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 3.0e-84 315.8 318 55.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 5.2e-84 315.1 333 52.6
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 5.2e-84 315.1 332 50.3
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 2.0e-83 313.2 321 54.2
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 2.6e-83 312.8 327 52.9
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 4.4e-83 312.0 334 52.1
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 4.4e-83 312.0 329 52.9
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 1.3e-82 310.5 329 52.0
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 1.7e-82 310.1 297 56.9
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 1.7e-82 310.1 319 55.5
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.2e-82 309.7 328 52.7
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 4.9e-82 308.5 328 53.4
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 1.8e-81 306.6 323 53.3
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 4.1e-81 305.4 328 53.4
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 5.4e-81 305.1 327 52.6
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 7.0e-81 304.7 312 54.5
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 2.0e-80 303.1 297 57.6
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 2.7e-80 302.8 307 55.0
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.5e-80 302.0 177 86.4
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 3.8e-79 298.9 278 56.8
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 6.6e-79 298.1 338 51.5
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 8.6e-79 297.7 327 51.4
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-78 297.0 298 54.7
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 1.9e-78 296.6 329 51.1
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 4.3e-78 295.4 324 50.6
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 7.3e-78 294.7 373 46.4
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 4.7e-77 292.0 333 50.5
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 8.0e-77 291.2 310 52.3
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 1.8e-76 290.0 286 53.5
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 8.9e-76 287.7 319 52.0
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 1.5e-75 287.0 294 53.1
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 1.5e-75 287.0 293 52.9
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-75 287.0 315 51.7
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 2.0e-75 286.6 325 50.2
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 2.6e-75 286.2 289 53.6
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 9.8e-75 284.3 304 53.0
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 9.8e-75 284.3 259 59.1
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 4.9e-74 282.0 294 51.7
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 2.0e-72 276.6 230 63.5
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 2.7e-72 276.2 358 45.0
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 1.3e-71 273.9 324 50.3
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 1.7e-71 273.5 291 51.9
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 4.7e-69 265.4 213 66.2
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 4.7e-69 265.4 274 52.9
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 4.7e-69 265.4 337 45.7
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 3.1e-68 262.7 216 65.7
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-68 262.7 277 54.2
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 7.5e-67 258.1 228 59.2
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 9.8e-67 257.7 271 51.3
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.0e-64 248.4 290 49.3
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 7.8e-64 248.1 309 48.2
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.3e-60 236.5 219 58.9
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.0e-59 233.4 278 52.9
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 3.2e-57 226.1 244 48.8
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.5e-56 222.6 213 56.3
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.6e-55 218.0 193 60.6
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.4e-52 210.7 269 47.6
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-52 209.9 286 45.8
Potri.004G169900 Populus trichocarpa HOM05D007396 ORTHO05D009228 3.1e-52 209.5 314 43.9
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.3e-47 193.4 293 44.0
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.2e-45 187.6 181 58.0
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.4e-44 184.1 256 41.4
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 5.8e-43 178.7 226 45.1
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.2e-41 172.9 168 60.1
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 9.3e-41 171.4 361 33.5
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 3.5e-40 169.5 224 41.1
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 3.6e-37 159.5 167 52.1
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 6.9e-36 155.2 163 51.5
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.9e-33 147.1 152 53.3
BcaC07g38815 Brassica carinata HOM05D007396 ORTHO05D009228 6.0e-32 142.1 260 36.9
MELO3C010415.2 Cucumis melo HOM05D007396 ORTHO05D009228 3.1e-28 129.8 126 54.0
Actinidia31121 Actinidia chinensis HOM05D007396 ORTHO05D009228 7.4e-14 82.0 51 70.6
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 9.6e-14 81.6 175 29.1
Mapoly0001s0056 Marchantia polymorpha HOM05D007396 ORTHO05D009228 3.7e-13 79.7 241 27.0
Medtr2g105710 Medicago truncatula HOM05D007396 ORTHO05D009228 1.1e-12 78.2 52 73.1
BcaC05g25534 Brassica carinata HOM05D000163 ORTHO05D000219 1.3e-10 71.2 88 44.3
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 8.7e-07 58.5 81 46.9


User provided reference genes

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