Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031381 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 7.8e-48 193.4 90 100.0
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-25 117.1 85 67.1
CSS0047324 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.6e-19 98.6 72 62.5
Manes.18G145666 Manihot esculenta HOM05D000002 ORTHO05D000047 8.1e-13 77.0 70 52.9
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-10 68.6 56 57.1
CANSAT80G2584 Cannabis sativa HOM05D000002 ORTHO05D000047 2.4e-09 65.5 61 52.5
Gorai.008G098500 Gossypium raimondii HOM05D000002 ORTHO05D000047 1.2e-08 63.2 66 48.5
TAR546G0002 Trochodendron aralioides HOM05D000002 ORTHO05D017724 3.5e-08 61.6 61 47.5
CSS0009499 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.9e-07 58.2 65 41.5
CSS0000940 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0004057 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0013318 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0017533 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0020187 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0021109 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0021536 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0027844 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0034457 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0036738 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0045746 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 5.1e-07 57.8 65 41.5
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 6.6e-07 57.4 70 40.0
CSS0036528 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 1.5e-06 56.2 65 40.0
CSS0050489 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.5e-06 56.2 65 41.5
CSS0012133 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.5e-06 55.5 65 40.0
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 2.5e-06 55.5 87 33.3
CSS0019500 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 3.3e-06 55.1 65 40.0
CSS0036394 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 4.3e-06 54.7 70 38.6
Lj1g0008265 Lotus japonicus HOM05D000002 ORTHO05D000047 4.3e-06 54.7 58 41.4
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 5.6e-06 54.3 85 31.8
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 7.3e-06 53.9 62 38.7
PGR004G1445 Punica granatum HOM05D000002 ORTHO05D000047 7.3e-06 53.9 67 34.3
Oeu050509.1 Olea europaea HOM05D000002 ORTHO05D000047 9.6e-06 53.5 68 36.8
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 9.6e-06 53.5 80 35.0


User provided reference genes

Program Settings