Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031360 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 3.1e-189 664.8 311 100.0
CSS0001106 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 1.2e-180 636.3 321 94.4
CSS0008637 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 6.0e-172 607.4 321 90.7
Hma1.2p1_0018F.1_g012950 Hydrangea macrophylla HOM05D008081 ORTHO05D010223 2.5e-125 452.6 323 66.6
DCAR_009223 Daucus carota HOM05D008081 ORTHO05D010223 3.6e-108 395.6 325 61.5
Cc06_g09100 Coffea canephora HOM05D008081 ORTHO05D010223 3.9e-107 392.1 332 59.9
Manes.14G127800 Manihot esculenta HOM05D008081 ORTHO05D010223 8.8e-107 391.0 320 59.4
QL02p086958 Quercus lobata HOM05D008081 ORTHO05D010223 4.3e-106 388.7 321 60.4
CSS0020794 Camellia sinensis var. sinensis HOM05D008081 ORTHO05D010223 7.4e-106 387.9 311 67.2
Nitab4.5_0000282g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 2.4e-104 382.9 322 56.8
Actinidia09389 Actinidia chinensis HOM05D008081 ORTHO05D010223 3.1e-104 382.5 321 61.1
Peaxi162Scf00292g00051 Petunia axillaris HOM05D008081 ORTHO05D010223 1.0e-102 377.5 292 60.6
CANSAT56G1336 Cannabis sativa HOM05D008081 ORTHO05D010223 6.5e-102 374.8 322 56.8
Duzib168G0460 Durio zibethinus HOM05D008081 ORTHO05D010223 8.5e-102 374.4 320 56.6
Nn2g11886 Nelumbo nucifera HOM05D008081 ORTHO05D010223 1.4e-101 373.6 319 56.1
Lsat_1_v5_gn_5_98420 Lactuca sativa HOM05D008081 ORTHO05D010223 4.7e-100 368.6 323 54.5
ECA234G2703 Erigeron canadensis HOM05D008081 ORTHO05D010223 6.1e-100 368.2 324 54.6
COL.COLO4_34977 Corchorus olitorius HOM05D008081 ORTHO05D010223 1.0e-99 367.5 325 55.4
HanXRQChr10g0316871 Helianthus annuus HOM05D008081 ORTHO05D010223 1.0e-99 367.5 325 54.5
Thecc.09G118700 Theobroma cacao HOM05D008081 ORTHO05D010223 3.7e-97 359.0 322 54.3
MBI04_g33811_MAGBIO Magnolia biondii HOM05D008081 ORTHO05D010223 4.1e-96 355.5 319 56.7
Glyma.06G213000 Glycine max HOM05D008081 ORTHO05D010223 7.7e-95 351.3 322 55.0
Aqoxy7G01970 Aquilegia oxysepala HOM05D008081 ORTHO05D010223 1.0e-94 350.9 322 53.7
PSO765G0202 Papaver somniferum HOM05D008081 ORTHO05D010223 3.8e-94 349.0 320 53.4
Cpa.g.sc75.87 Carica papaya HOM05D008081 ORTHO05D010223 1.9e-93 346.7 326 55.8
Medtr2g055250 Medicago truncatula HOM05D008081 ORTHO05D010223 1.9e-93 346.7 323 53.9
Psat1g025520 Pisum sativum HOM05D008081 ORTHO05D010223 1.9e-93 346.7 325 54.5
GSVIVG01015465001 Vitis vinifera HOM05D008081 ORTHO05D010223 2.7e-92 342.8 319 53.3
Eucgr.C01103 Eucalyptus grandis HOM05D008081 ORTHO05D010223 3.6e-92 342.4 323 53.3
Solyc08g041700.1 Solanum lycopersicum HOM05D008081 ORTHO05D010223 3.6e-92 342.4 334 51.2
Eucgr.L02382 Eucalyptus grandis HOM05D008081 ORTHO05D010223 8.0e-92 341.3 323 53.3
Ca_02616_v3 Cicer arietinum L. HOM05D008081 ORTHO05D010223 1.8e-91 340.1 324 54.3
Atru.chr7.1264 Acer truncatum HOM05D008081 ORTHO05D010223 2.3e-91 339.7 334 52.1
Sopen08g011800 Solanum pennellii HOM05D008081 ORTHO05D010223 3.0e-91 339.3 334 50.9
PGSC0003DMG400015624 Solanum tuberosum HOM05D008081 ORTHO05D010223 1.1e-90 337.4 336 51.8
PSO349G0241 Papaver somniferum HOM05D008081 ORTHO05D010223 1.5e-90 337.0 322 52.2
VMungo1309G1591 Vigna mungo HOM05D008081 ORTHO05D010223 2.6e-90 336.3 326 54.3
Glyma.04G150400 Glycine max HOM05D008081 ORTHO05D010223 3.3e-90 335.9 322 54.3
PGR142G1327 Punica granatum HOM05D008081 ORTHO05D010223 7.4e-90 334.7 320 52.2
Phvul.009G199400 Phaseolus vulgaris HOM05D008081 ORTHO05D010223 6.3e-89 331.6 323 53.9
Ciclev10008639m.g Citrus clementina HOM05D008081 ORTHO05D010223 1.8e-88 330.1 324 52.5
Gorai.010G066900 Gossypium raimondii HOM05D008081 ORTHO05D010223 1.2e-87 327.4 322 51.9
Lj1g0011101 Lotus japonicus HOM05D008081 ORTHO05D010223 2.0e-87 326.6 333 52.0
Gohir.A06G059000 Gossypium hirsutum HOM05D008081 ORTHO05D010223 5.9e-87 325.1 322 51.9
Gohir.D06G057200 Gossypium hirsutum HOM05D008081 ORTHO05D010223 5.9e-87 325.1 322 51.9
Lalb_Chr01g0020971 Lupinus albus HOM05D008081 ORTHO05D010223 2.2e-86 323.2 324 50.9
Nitab4.5_0003085g0020 Nicotiana tabacum HOM05D008081 ORTHO05D010223 3.8e-86 322.4 285 54.4
TAR383G0366 Trochodendron aralioides HOM05D008081 ORTHO05D010223 5.5e-85 318.5 310 52.3
Sabra18G0062600 Salix brachista HOM05D008081 ORTHO05D010223 8.0e-84 314.7 326 48.8
Potri.018G071900 Populus trichocarpa HOM05D008081 ORTHO05D010223 5.2e-83 312.0 330 50.3
TWI34G1060 Tripterygium wilfordii HOM05D008081 ORTHO05D010223 6.8e-83 311.6 324 51.2
Oeu032197.1 Olea europaea HOM05D008081 ORTHO05D010223 1.8e-80 303.5 320 50.0
AL6G31500 Arabidopsis lyrata HOM05D008081 ORTHO05D010223 4.9e-73 278.9 327 45.9
AT5G19970 Arabidopsis thaliana HOM05D008081 ORTHO05D010223 2.4e-72 276.6 326 45.7
Carub.0006s1834 Capsella rubella HOM05D008081 ORTHO05D010223 3.1e-72 276.2 327 46.5
CARHR192880 Cardamine hirsuta HOM05D008081 ORTHO05D010223 4.5e-71 272.3 327 44.6
Thhalv10013658m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 8.6e-70 268.1 325 45.5
Thhalv10013905m.g Eutrema salsugineum HOM05D008081 ORTHO05D010223 8.6e-70 268.1 325 45.5
BNapus_Darmor_BZH_scaffold_38p01920 Brassica napus HOM05D008081 ORTHO05D010223 2.3e-67 260.0 326 44.5
BolC2t06998H Brassica oleracea HOM05D008081 ORTHO05D010223 2.3e-67 260.0 326 44.5
Sp6g24410 Schrenkiella parvula HOM05D008081 ORTHO05D010223 3.0e-67 259.6 327 44.3
Zm00001eb158500 Zea mays HOM05D008081 ORTHO05D010223 6.8e-67 258.5 323 43.0
Aa31LG4G11630 Aethionema arabicum HOM05D008081 ORTHO05D010223 8.9e-67 258.1 325 42.5
A02p05940 Brassica napus HOM05D008081 ORTHO05D010223 1.5e-66 257.3 326 44.2
BraA02t05546Z Brassica rapa HOM05D008081 ORTHO05D010223 1.5e-66 257.3 326 44.2
Dinv36582 Davidia involucrata HOM05D008081 ORTHO05D010223 1.7e-65 253.8 228 58.3
Os01g0647000 Oryza sativa ssp. japonica HOM05D008081 ORTHO05D010223 2.4e-64 250.0 319 43.9
TPR.G30892 Trifolium pratense HOM05D008081 ORTHO05D010223 3.4e-58 229.6 208 53.4
THA.LOC104815107 Tarenaya hassleriana HOM05D008081 ORTHO05D010223 3.0e-54 216.5 319 41.1
ATR0083G076 Amborella trichopoda HOM05D008081 ORTHO05D010223 5.2e-51 205.7 317 36.3
BcaB05g22890 Brassica carinata HOM05D008081 ORTHO05D010223 6.0e-47 192.2 245 42.4
BcaC03g13723 Brassica carinata HOM05D008081 ORTHO05D010223 2.7e-31 140.2 141 48.2


User provided reference genes

Program Settings