Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.5e-134 482.6 307 100.0
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.1e-64 248.8 130 94.6
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.1e-64 248.8 130 94.6
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 5.0e-58 229.2 118 95.8
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.0e-54 217.2 110 98.2
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 6.6e-50 202.2 130 79.2
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 7.5e-46 188.7 130 70.8
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 2.0e-43 180.6 130 63.1
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 2.7e-43 180.3 117 76.1
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 8.6e-42 175.3 114 70.2
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.9e-41 174.1 130 60.8
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 2.5e-41 173.7 131 62.6
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 6.2e-40 169.1 130 58.5
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 6.2e-40 169.1 131 59.5
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 1.8e-39 167.5 122 62.3
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 2.0e-38 164.1 131 58.8
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 2.6e-38 163.7 131 58.0
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 2.2e-37 160.6 109 71.6
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 1.1e-36 158.3 130 56.9
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 1.9e-36 157.5 130 54.6
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 3.2e-36 156.8 130 60.0
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 9.2e-36 155.2 130 55.4
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 1.3e-34 151.4 130 56.2
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.7e-34 151.0 133 55.6
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 5.1e-34 149.4 130 53.8
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 3.3e-33 146.7 129 54.3
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 1.2e-32 144.8 112 61.6
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 8.1e-32 142.1 130 52.3
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 4.0e-31 139.8 117 55.6
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 1.2e-30 138.3 108 57.4
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 1.5e-30 137.9 118 55.1
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.0e-30 137.5 77 88.3
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 2.6e-30 137.1 131 50.4
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 5.8e-30 136.0 125 51.2
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 1.7e-29 134.4 114 56.1
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 2.2e-29 134.0 112 57.1
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 2.9e-29 133.7 114 52.6
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 4.9e-29 132.9 116 50.9
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 8.3e-29 132.1 128 49.2
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 1.4e-28 131.3 115 53.9
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 2.4e-28 130.6 117 48.7
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 4.1e-28 129.8 109 53.2
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 9.2e-28 128.6 117 47.9
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 9.2e-28 128.6 112 51.8
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 1.2e-27 128.3 112 50.9
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.6e-27 127.9 112 50.9
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.6e-27 127.9 109 54.1
CsaV3_4G036480 Cucumis sativus L. HOM05D006008 ORTHO05D007334 4.6e-27 126.3 109 52.3
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 4.6e-27 126.3 118 47.5
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.0e-26 125.2 119 46.2
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 1.0e-26 125.2 103 58.3
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 1.3e-26 124.8 112 50.9
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 3.0e-26 123.6 111 50.5
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 3.9e-26 123.2 114 52.6
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 6.6e-26 122.5 109 51.4
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 6.6e-26 122.5 112 52.7
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 8.6e-26 122.1 114 51.8
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.1e-25 121.7 114 51.8
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 1.1e-25 121.7 109 52.3
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 1.9e-25 120.9 112 52.7
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 4.3e-25 119.8 111 47.7
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 5.6e-25 119.4 114 50.9
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 5.6e-25 119.4 109 50.5
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 7.3e-25 119.0 115 49.6
Lalb_Chr23g0268191 Lupinus albus HOM05D006008 ORTHO05D007334 7.3e-25 119.0 109 53.2
Nn7g36096 Nelumbo nucifera HOM05D006008 ORTHO05D007334 7.3e-25 119.0 112 50.9
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 7.3e-25 119.0 112 52.7
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 9.5e-25 118.6 112 50.9
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 1.2e-24 118.2 107 53.3
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 1.2e-24 118.2 110 50.9
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 2.1e-24 117.5 118 47.5
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 8.1e-24 115.5 132 43.9
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 1.1e-23 115.2 108 49.1
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 5.2e-23 112.8 105 48.6
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 6.8e-23 112.5 133 40.6
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 8.9e-23 112.1 109 49.5
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 2.6e-22 110.5 127 49.6
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 3.4e-22 110.2 112 46.4
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 5.8e-22 109.4 117 41.9
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 1.3e-21 108.2 133 42.1
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 2.2e-21 107.5 133 42.1
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 2.2e-21 107.5 133 42.1
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 2.9e-21 107.1 117 47.0
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 6.4e-21 105.9 110 47.3
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 9.2e-20 102.1 113 42.5
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 2.1e-19 100.9 112 43.8
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 2.1e-19 100.9 133 39.8
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 2.1e-19 100.9 133 39.8
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 6.0e-19 99.4 112 42.9
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 1.0e-18 98.6 111 42.3
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.0e-18 98.6 101 45.5
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 3.9e-18 96.7 113 41.6
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 5.1e-18 96.3 116 41.4
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 8.7e-18 95.5 113 41.6
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 1.1e-17 95.1 110 41.8
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 1.5e-17 94.7 114 43.0
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.9e-17 94.4 113 38.9
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.5e-17 94.0 109 43.1
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 2.5e-17 94.0 113 41.6
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 2.5e-17 94.0 113 41.6
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 3.3e-17 93.6 113 41.6
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 1.6e-16 91.3 110 42.7
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.8e-16 90.5 109 41.3
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 1.8e-15 87.8 112 41.1
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 5.3e-15 86.3 97 43.3
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 9.0e-15 85.5 41 95.1
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.6e-14 84.0 304 44.1
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 3.4e-14 83.6 104 43.3
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.9e-12 77.8 41 85.4
HPP92_017173 Vanilla planifolia HOM05D006008 ORTHO05D007334 5.4e-12 76.3 88 43.2
ATR0180G025 Amborella trichopoda HOM05D042338 ORTHO05D031092 4.6e-11 73.2 81 46.9
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 1.0e-10 72.0 75 44.0
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 1.7e-10 71.2 91 41.8
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 2.3e-10 70.9 85 40.0
Thhalv10004021m.g Eutrema salsugineum HOM05D001779 ORTHO05D001753 3.4e-06 57.0 103 30.1
MBI01_g15492_MAGBIO Magnolia biondii HOM05D000001 ORTHO05D009667 5.8e-06 56.2 317 20.2
Sp6g36450 Schrenkiella parvula HOM05D006596 ORTHO05D008497 5.8e-06 56.2 313 18.5
FAN18G3877 Fragaria x ananassa HOM05D003039 ORTHO05D009478 7.6e-06 55.8 86 32.6


User provided reference genes

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