Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031335 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.9e-56 221.1 102 100.0
CSS0005869 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.2e-43 178.7 102 81.4
CSS0045379 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 8.5e-43 176.8 102 79.4
CSS0024732 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.9e-34 149.1 97 66.0
CSS0025359 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.2e-34 148.3 97 66.0
CSS0046961 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 3.3e-26 121.7 97 59.8
CSS0014107 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-23 112.5 95 48.4
CSS0005179 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 2.6e-23 112.1 96 47.9
CSS0019468 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.6e-23 112.1 95 48.4
CSS0038721 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 1.7e-22 109.4 82 61.0
CSS0002270 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.4e-21 105.5 89 48.3
CSS0039659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000006 3.5e-20 101.7 58 70.7
CSS0007673 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 7.8e-20 100.5 95 43.2
CSS0001091 Camellia sinensis var. sinensis HOM05D039892 ORTHO05D013815 1.0e-19 100.1 94 41.5
CSS0034649 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.0e-19 100.1 87 47.1
CSS0006262 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.7e-19 99.4 95 38.9
CSS0008549 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.1e-17 90.9 95 40.0
CSS0016353 Camellia sinensis var. sinensis HOM05D002203 ORTHO05D013815 4.0e-16 88.2 104 35.6
Atru.chr1.2408 Acer truncatum HOM05D000003 ORTHO05D000004 4.6e-12 74.7 98 34.7
CSS0001040 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.6e-12 74.7 97 34.0
CSS0024939 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 3.9e-11 71.6 94 36.2
Atru.chr1.3974 Acer truncatum HOM05D000003 ORTHO05D000004 5.0e-11 71.2 97 35.1
Atru.chr4.3084 Acer truncatum HOM05D000003 ORTHO05D000004 6.6e-11 70.9 94 33.0
CSS0026765 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.6e-11 70.9 92 34.8
Atru.chr13.2301 Acer truncatum HOM05D000003 ORTHO05D002259 1.9e-10 69.3 98 34.7
TWI39G0070 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 1.9e-10 69.3 97 30.9
Atru.chr1.3846 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-10 68.9 94 34.0
Atru.chr12.2307 Acer truncatum HOM05D000003 ORTHO05D002259 2.5e-10 68.9 95 31.6
CSS0044712 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.3e-10 68.2 62 45.2
Hma1.2p1_0402F.1_g145030 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 4.3e-10 68.2 88 39.8
CSS0010072 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 7.3e-10 67.4 48 60.4
Atru.chr11.1073 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-10 67.0 94 28.7
Atru.chr4.1973 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-10 67.0 95 32.6
Atru.chr5.2369 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-10 67.0 95 33.7
Atru.chr9.316 Acer truncatum HOM05D000003 ORTHO05D002259 9.5e-10 67.0 98 31.6
Atru.chr2.915 Acer truncatum HOM05D000003 ORTHO05D000004 1.2e-09 66.6 83 36.1
Atru.chr2.3295 Acer truncatum HOM05D000003 ORTHO05D000004 2.1e-09 65.9 95 31.6
Atru.chr3.3329 Acer truncatum HOM05D000003 ORTHO05D002259 2.1e-09 65.9 95 29.5
Atru.chr5.3360 Acer truncatum HOM05D000003 ORTHO05D002259 2.1e-09 65.9 95 31.6
Atru.chr7.607 Acer truncatum HOM05D000003 ORTHO05D002259 2.8e-09 65.5 68 32.4
Atru.chr2.2547 Acer truncatum HOM05D000003 ORTHO05D000004 3.6e-09 65.1 95 26.3
Atru.chr2.3564 Acer truncatum HOM05D000003 ORTHO05D000004 4.7e-09 64.7 95 29.5
CSS0014831 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-09 64.7 97 32.0
CSS0022483 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-09 64.7 55 45.5
CSS0039930 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.7e-09 64.7 55 45.5
Rhsim12G0011400 Rhododendron simsii HOM05D012301 ORTHO05D013815 6.2e-09 64.3 70 38.6
Atru.chr6.296 Acer truncatum HOM05D000003 ORTHO05D002259 8.0e-09 63.9 97 32.0
CSS0011675 Camellia sinensis var. sinensis HOM05D012301 ORTHO05D013815 1.1e-08 63.5 75 34.7
Atru.chr7.96 Acer truncatum HOM05D000003 ORTHO05D002259 1.4e-08 63.2 94 31.9
CSS0026307 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.4e-08 63.2 55 43.6
Atru.chr6.713 Acer truncatum HOM05D000003 ORTHO05D000004 2.3e-08 62.4 96 28.1
CSS0029089 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.3e-08 62.4 61 37.7
Atru.chr11.1160 Acer truncatum HOM05D000003 ORTHO05D002259 4.0e-08 61.6 95 29.5
Atru.chr3.3914 Acer truncatum HOM05D000003 ORTHO05D002259 5.2e-08 61.2 94 29.8
CSS0021010 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.9e-08 60.5 66 42.4
Atru.chr4.3157 Acer truncatum HOM05D000003 ORTHO05D002259 1.5e-07 59.7 78 30.8
TWI14G0536 Tripterygium wilfordii HOM05D008457 ORTHO05D002259 1.5e-07 59.7 92 30.4
CSS0008056 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 2.0e-07 59.3 69 42.0
Hma1.2p1_1754F.1_g300945 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 2.0e-07 59.3 59 39.0
Atru.chr6.184 Acer truncatum HOM05D000003 ORTHO05D002259 2.6e-07 58.9 95 26.3
Atru.chr10.59 Acer truncatum HOM05D000003 ORTHO05D002259 3.4e-07 58.5 80 32.5
Atru.chr6.1197 Acer truncatum HOM05D000003 ORTHO05D002259 3.4e-07 58.5 99 28.3
Atru.chr8.877 Acer truncatum HOM05D000003 ORTHO05D002259 3.4e-07 58.5 98 31.6
Hma1.2p1_0055F.1_g031300 Hydrangea macrophylla HOM05D000003 ORTHO05D002259 3.4e-07 58.5 78 32.1
Aqoxy2G01177 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.4e-07 58.2 86 29.1
Atru.chr11.2510 Acer truncatum HOM05D000003 ORTHO05D000004 5.8e-07 57.8 100 30.0
Atru.chr2.2918 Acer truncatum HOM05D000003 ORTHO05D000004 5.8e-07 57.8 95 31.6
CSS0011659 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 9.8e-07 57.0 93 32.3
Glyma.05G143850 Glycine max HOM05D013446 ORTHO05D017041 9.8e-07 57.0 51 47.1
PSO017G0068 Papaver somniferum HOM05D000003 ORTHO05D000004 9.8e-07 57.0 71 33.8
TWI74G1163 Tripterygium wilfordii HOM05D000003 ORTHO05D002259 9.8e-07 57.0 76 36.8
Atru.chr6.413 Acer truncatum HOM05D000003 ORTHO05D002259 1.7e-06 56.2 82 29.3
COL.COLO4_33988 Corchorus olitorius HOM05D012135 ORTHO05D016957 1.7e-06 56.2 57 38.6
Rhsim08G0187000 Rhododendron simsii HOM05D040390 ORTHO05D013815 1.7e-06 56.2 58 34.5
Thecc.02G058700 Theobroma cacao HOM05D000003 ORTHO05D002259 1.7e-06 56.2 76 34.2
Atru.chr6.253 Acer truncatum HOM05D000003 ORTHO05D002259 2.2e-06 55.8 95 27.4
Thecc.05G198700 Theobroma cacao HOM05D000003 ORTHO05D002259 2.9e-06 55.5 62 38.7
Aqoxy7G02093 Aquilegia oxysepala HOM05D008675 ORTHO05D000004 3.7e-06 55.1 65 35.4
DCAR_023094 Daucus carota HOM05D021889 ORTHO05D022486 3.7e-06 55.1 44 47.7
Atru.chr3.2993 Acer truncatum HOM05D000003 ORTHO05D002259 4.9e-06 54.7 73 30.1
Aqoxy4G01680 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 54.7 108 26.9
Aqoxy4G01687 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 4.9e-06 54.7 108 26.9
CSS0006080 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 54.7 57 36.8
CSS0014949 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 4.9e-06 54.7 57 36.8
Atru.chr4.1523 Acer truncatum HOM05D000003 ORTHO05D002259 6.4e-06 54.3 95 26.3
Aqoxy2G01936 Aquilegia oxysepala HOM05D000003 ORTHO05D000004 6.4e-06 54.3 104 26.9
Sc24g0002380 Simmondsia chinensis HOM05D003282 ORTHO05D003637 6.4e-06 54.3 57 38.6
CSS0017847 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 8.3e-06 53.9 57 38.6
Lalb_Chr25g0287421 Lupinus albus HOM05D011108 ORTHO05D010885 8.3e-06 53.9 66 27.3
PSO210G4139 Papaver somniferum HOM05D000003 ORTHO05D000004 8.3e-06 53.9 76 30.3
Rhsim11G0109000 Rhododendron simsii HOM05D000002 ORTHO05D000047 8.3e-06 53.9 68 29.4


User provided reference genes

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