Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031317 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.6e-106 389.4 193 100.0
CSS0013987 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 3.5e-106 388.3 193 99.5
CSS0003796 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 2.1e-98 362.5 193 95.3
CSS0041914 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.0e-98 360.9 197 92.9
CSS0045873 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.7e-97 357.5 194 94.8
CSS0045886 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 6.7e-97 357.5 194 94.8
CSS0023116 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.9e-96 355.9 194 94.8
CSS0041545 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 7.7e-61 237.7 174 73.6
CSS0042684 Camellia sinensis var. sinensis HOM05D007849 ORTHO05D009964 1.2e-58 230.3 174 72.4
Actinidia37211 Actinidia chinensis HOM05D007849 ORTHO05D009964 2.5e-51 206.1 132 76.5
Rhsim13G0083900 Rhododendron simsii HOM05D007849 ORTHO05D009964 1.8e-49 199.9 135 72.6
vmacro03084 Vaccinium macrocarpon HOM05D007849 ORTHO05D009964 1.1e-46 190.7 140 69.3
Dinv01583 Davidia involucrata HOM05D007849 ORTHO05D009964 8.8e-41 171.0 132 65.9
Dinv16985 Davidia involucrata HOM05D007849 ORTHO05D009964 8.8e-41 171.0 132 65.9
Dinv42934 Davidia involucrata HOM05D007849 ORTHO05D009964 8.8e-41 171.0 132 65.9
Dinv43166 Davidia involucrata HOM05D007849 ORTHO05D009964 8.8e-41 171.0 132 65.9
Oeu019202.2 Olea europaea HOM05D007849 ORTHO05D009964 5.0e-36 155.2 131 56.5
QL01p032362 Quercus lobata HOM05D007849 ORTHO05D009964 6.1e-34 148.3 127 58.3
TAR636G2131 Trochodendron aralioides HOM05D007849 ORTHO05D009964 6.1e-34 148.3 120 58.3
Lj2C1060G4 Lonicera japonica HOM05D007849 ORTHO05D009964 3.0e-33 146.0 125 59.2
SalBow2G0065 Salvia bowleyana HOM05D007849 ORTHO05D009964 1.5e-32 143.7 136 50.7
GSVIVG01024984001 Vitis vinifera HOM05D007849 ORTHO05D009964 4.4e-32 142.1 121 59.5
Cfa011488 Carpinus fangiana HOM05D007849 ORTHO05D009964 5.7e-32 141.7 125 55.2
Migut.N02673 Erythranthe guttata HOM05D007849 ORTHO05D009964 1.3e-31 140.6 125 52.0
Hma1.2p1_1888F.1_g306580 Hydrangea macrophylla HOM05D007849 ORTHO05D009964 4.9e-31 138.7 125 56.0
PSO339G6571 Papaver somniferum HOM05D007849 ORTHO05D009964 1.1e-30 137.5 130 50.8
Potri.009G029800 Populus trichocarpa HOM05D007849 ORTHO05D009964 1.1e-30 137.5 121 53.7
MBI14_g31252_MAGBIO Magnolia biondii HOM05D007849 ORTHO05D009964 1.4e-30 137.1 129 53.5
Duzib168G1667 Durio zibethinus HOM05D007849 ORTHO05D009964 3.2e-30 136.0 125 52.0
SGA_v2.0_scaffold104G30123 Striga asiatica HOM05D007849 ORTHO05D009964 4.1e-30 135.6 133 48.9
Manes.04G034000 Manihot esculenta HOM05D007849 ORTHO05D009964 1.2e-29 134.0 121 55.4
Sabra09G0020700 Salix brachista HOM05D007849 ORTHO05D009964 1.2e-29 134.0 121 52.9
RcHm_v2.0_Chr5g0064071 Rosa chinensis HOM05D007849 ORTHO05D009964 2.0e-29 133.3 131 54.2
Haze_24080 Corylus avellana HOM05D007849 ORTHO05D009964 4.6e-29 132.1 157 44.6
Nn2g10385 Nelumbo nucifera HOM05D007849 ORTHO05D009964 5.9e-29 131.7 142 45.8
MD03G1096200 Malus domestica HOM05D007849 ORTHO05D009964 7.8e-29 131.3 128 50.0
Gohir.D03G126500 Gossypium hirsutum HOM05D007849 ORTHO05D009964 1.3e-28 130.6 125 50.4
DCAR_018903 Daucus carota HOM05D007849 ORTHO05D009964 1.7e-28 130.2 140 47.1
Gohir.A03G041600 Gossypium hirsutum HOM05D007849 ORTHO05D009964 3.9e-28 129.0 125 48.8
Ciclev10029013m.g Citrus clementina HOM05D007849 ORTHO05D009964 6.6e-28 128.3 125 50.4
COL.COLO4_18494 Corchorus olitorius HOM05D007849 ORTHO05D009964 6.6e-28 128.3 130 48.5
Thecc.09G323300 Theobroma cacao HOM05D007849 ORTHO05D009964 4.3e-27 125.6 125 49.6
FvH4_3g35813 Fragaria vesca HOM05D007849 ORTHO05D009964 7.3e-27 124.8 131 49.6
CsaV3_6G016950 Cucumis sativus L. HOM05D007849 ORTHO05D009964 2.1e-26 123.2 124 45.2
unitig_0.g229 Utricularia gibba HOM05D007849 ORTHO05D009964 3.6e-26 122.5 123 48.8
Eucgr.B02377 Eucalyptus grandis HOM05D007849 ORTHO05D009964 1.0e-25 120.9 122 50.0
TWI79G0095 Tripterygium wilfordii HOM05D007849 ORTHO05D009964 1.8e-25 120.2 125 44.8
Gorai.003G133000 Gossypium raimondii HOM05D007849 ORTHO05D009964 3.1e-25 119.4 140 44.3
PGR102G2625 Punica granatum HOM05D007849 ORTHO05D009964 3.1e-25 119.4 125 49.6
Aqoxy6G02063 Aquilegia oxysepala HOM05D007849 ORTHO05D009964 6.8e-25 118.2 131 44.3
ECA236G2501 Erigeron canadensis HOM05D007849 ORTHO05D009964 2.0e-24 116.7 131 49.6
FAN11G2231 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.0e-24 116.7 175 42.9
Lsat_1_v5_gn_4_92200 Lactuca sativa HOM05D007849 ORTHO05D009964 2.0e-24 116.7 125 49.6
Hund18918 Selenicereus undatus HOM05D007849 ORTHO05D009964 2.0e-24 116.7 129 48.8
Atru.chr2.2286 Acer truncatum HOM05D007849 ORTHO05D009964 2.6e-24 116.3 125 44.8
Atru.chr3.3864 Acer truncatum HOM05D007849 ORTHO05D009964 2.6e-24 116.3 125 44.8
FAN21G0522 Fragaria x ananassa HOM05D007849 ORTHO05D009964 2.6e-24 116.3 102 55.9
ClCG02G020250 Citrullus lanatus HOM05D007849 ORTHO05D009964 1.3e-23 114.0 134 44.0
Os03g0275400 Oryza sativa ssp. japonica HOM05D007849 ORTHO05D009964 4.1e-22 109.0 124 47.6
Sed0012750 Sechium edule HOM05D007849 ORTHO05D009964 5.4e-22 108.6 135 39.3
EL10Ac7g16001 Beta vulgaris HOM05D007849 ORTHO05D009964 2.0e-21 106.7 131 45.8
AUR62001805 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.7e-21 106.3 141 47.5
ATR0559G278 Amborella trichopoda HOM05D007849 ORTHO05D009964 4.6e-21 105.5 129 39.5
AUR62009591 Chenopodium quinoa HOM05D007849 ORTHO05D009964 2.3e-20 103.2 131 45.0
Zm00001eb012380 Zea mays HOM05D007849 ORTHO05D009964 3.9e-20 102.4 124 46.0
Ah.08g219350 Amaranthus hybridus HOM05D007849 ORTHO05D009964 2.5e-19 99.8 107 46.7
SEGI_09096 Sequoiadendron giganteum HOM05D007849 ORTHO05D009964 6.2e-18 95.1 132 40.9
HanXRQChr05g0134521 Helianthus annuus HOM05D007849 ORTHO05D009964 4.0e-17 92.4 55 67.3
Prupe.6G079200 Prunus persica HOM05D007849 ORTHO05D009964 3.7e-15 85.9 75 56.0
HPP92_021135 Vanilla planifolia HOM05D007849 ORTHO05D009964 1.9e-14 83.6 125 40.8
Zm00001eb397660 Zea mays HOM05D007849 ORTHO05D009964 2.4e-14 83.2 54 63.0
Sed0025903 Sechium edule HOM05D007849 ORTHO05D009964 9.2e-14 81.3 50 66.0
Pp3c18_13380 Physcomitrium patens HOM05D007849 ORTHO05D009964 3.5e-13 79.3 99 41.4
MELO3C025926.2 Cucumis melo HOM05D007849 ORTHO05D009964 6.0e-13 78.6 98 38.8
MSTRG.12647 Avicennia marina HOM05D007849 ORTHO05D009964 9.5e-11 71.2 41 70.7
Mapoly0108s0012 Marchantia polymorpha HOM05D007849 ORTHO05D009964 1.5e-08 63.9 50 46.0
CBR_g22259 Chara braunii HOM05D007849 ORTHO05D009964 2.2e-07 60.1 55 49.1
Gohir.D13G207600 Gossypium hirsutum HOM05D002026 ORTHO05D002291 1.4e-06 57.4 88 34.1
Cpa.g.sc81.165 Carica papaya HOM05D007849 ORTHO05D009964 2.4e-06 56.6 125 29.6
Gohir.A13G201800 Gossypium hirsutum HOM05D002026 ORTHO05D002291 2.4e-06 56.6 89 34.8
Zm00001eb433550 Zea mays HOM05D005588 ORTHO05D006615 4.1e-06 55.8 49 46.9
Gorai.013G236500 Gossypium raimondii HOM05D002026 ORTHO05D002291 5.4e-06 55.5 89 34.8
Zm00001eb066460 Zea mays HOM05D005588 ORTHO05D006615 7.1e-06 55.1 44 47.7
MSTRG.16651 Avicennia marina HOM05D002026 ORTHO05D002291 9.2e-06 54.7 103 29.1


User provided reference genes

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