Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031254 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 0.0e+00 1090.9 527 100.0
CSS0000318 Camellia sinensis var. sinensis HOM05D006382 ORTHO05D008938 9.4e-303 1042.7 527 96.4
Actinidia20164 Actinidia chinensis HOM05D006382 ORTHO05D008938 3.1e-253 878.2 531 81.4
vmacro13226 Vaccinium macrocarpon HOM05D006382 ORTHO05D008938 1.8e-245 852.4 553 76.3
Dinv43864 Davidia involucrata HOM05D006382 ORTHO05D008938 3.4e-244 848.2 531 79.5
Rhsim07G0010300 Rhododendron simsii HOM05D006382 ORTHO05D008938 2.1e-241 839.0 519 79.4
Actinidia10076 Actinidia chinensis HOM05D006382 ORTHO05D008938 1.5e-239 832.8 509 80.9
Hma1.2p1_0335F.1_g128860 Hydrangea macrophylla HOM05D006382 ORTHO05D008938 3.1e-237 825.1 473 82.0
GSVIVG01026968001 Vitis vinifera HOM05D006382 ORTHO05D008938 7.6e-236 820.5 519 76.9
Potri.002G164700 Populus trichocarpa HOM05D006382 ORTHO05D008938 3.3e-231 805.1 467 80.5
Cfa003871 Carpinus fangiana HOM05D006382 ORTHO05D008938 1.6e-230 802.7 527 75.0
Thecc.01G352300 Theobroma cacao HOM05D006382 ORTHO05D008938 1.6e-230 802.7 529 74.5
Duzib133G1372 Durio zibethinus HOM05D006382 ORTHO05D008938 8.1e-230 800.4 530 74.2
Prupe.2G177700 Prunus persica HOM05D006382 ORTHO05D008938 1.4e-229 799.7 529 74.1
RcHm_v2.0_Chr1g0357731 Rosa chinensis HOM05D006382 ORTHO05D008938 1.8e-229 799.3 527 74.2
Oeu063675.1 Olea europaea HOM05D006382 ORTHO05D008938 5.3e-229 797.7 532 73.7
MD01G1071500 Malus domestica HOM05D006382 ORTHO05D008938 1.5e-228 796.2 528 74.1
QL04p055600 Quercus lobata HOM05D006382 ORTHO05D008938 9.9e-228 793.5 526 74.3
FAN01G1899 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.9e-227 791.2 529 74.1
TWI59G0052 Tripterygium wilfordii HOM05D006382 ORTHO05D008938 4.9e-227 791.2 528 73.3
MSTRG.17299 Avicennia marina HOM05D006382 ORTHO05D008938 8.4e-227 790.4 528 74.1
Atru.chr5.564 Acer truncatum HOM05D006382 ORTHO05D008938 2.4e-226 788.9 480 78.3
FvH4_7g15410 Fragaria vesca HOM05D006382 ORTHO05D008938 2.4e-226 788.9 522 74.3
CiPaw.01G067600 Carya illinoinensis HOM05D006382 ORTHO05D008938 4.2e-226 788.1 527 73.4
Gorai.007G103500 Gossypium raimondii HOM05D006382 ORTHO05D008938 2.1e-225 785.8 529 73.3
Gohir.A11G092400 Gossypium hirsutum HOM05D006382 ORTHO05D008938 6.0e-225 784.3 528 72.9
Sabra02G0146800 Salix brachista HOM05D006382 ORTHO05D008938 2.5e-223 778.9 467 77.5
Haze_15566 Corylus avellana HOM05D006382 ORTHO05D008938 3.3e-223 778.5 544 71.9
Nitab4.5_0000915g0130 Nicotiana tabacum HOM05D006382 ORTHO05D008938 9.6e-223 776.9 523 72.5
Cpa.g.sc11.72 Carica papaya HOM05D006382 ORTHO05D008938 2.8e-222 775.4 517 72.7
PGSC0003DMG400000065 Solanum tuberosum HOM05D006382 ORTHO05D008938 3.7e-222 775.0 520 72.3
Lj1g0001840 Lotus japonicus HOM05D006382 ORTHO05D008938 5.3e-221 771.2 512 73.0
FAN06G2792 Fragaria x ananassa HOM05D006382 ORTHO05D008938 9.0e-221 770.4 551 70.1
Atru.BG.55.p Acer truncatum HOM05D006382 ORTHO05D008938 1.5e-220 769.6 462 79.7
Ciclev10019743m.g Citrus clementina HOM05D006382 ORTHO05D008938 7.6e-220 767.3 530 71.7
MELO3C006077.2 Cucumis melo HOM05D006382 ORTHO05D008938 9.9e-220 766.9 515 71.8
FAN03G1976 Fragaria x ananassa HOM05D006382 ORTHO05D008938 1.3e-219 766.5 516 72.3
Lalb_Chr19g0126881 Lupinus albus HOM05D006382 ORTHO05D008938 2.2e-219 765.8 532 69.9
Sopen01g038910 Solanum pennellii HOM05D006382 ORTHO05D008938 3.8e-219 765.0 521 71.8
ClCG05G001220 Citrullus lanatus HOM05D006382 ORTHO05D008938 1.9e-218 762.7 528 71.2
Sed0009049 Sechium edule HOM05D006382 ORTHO05D008938 1.9e-218 762.7 518 71.6
CsaV3_3G008570 Cucumis sativus L. HOM05D006382 ORTHO05D008938 3.2e-218 761.9 515 70.9
Lj9C589T7 Lonicera japonica HOM05D006382 ORTHO05D008938 3.2e-218 761.9 528 71.0
Solyc01g095120.3 Solanum lycopersicum HOM05D006382 ORTHO05D008938 4.2e-218 761.5 521 71.6
SGA_v2.0_scaffold4G02278 Striga asiatica HOM05D006382 ORTHO05D008938 9.3e-218 760.4 488 74.8
EL10Ac1g00353 Beta vulgaris HOM05D006382 ORTHO05D008938 6.0e-217 757.7 534 69.1
Nitab4.5_0010695g0050 Nicotiana tabacum HOM05D006382 ORTHO05D008938 1.0e-216 756.9 528 70.5
SalBow3G4256 Salvia bowleyana HOM05D006382 ORTHO05D008938 2.3e-216 755.7 542 68.8
Thhalv10005890m.g Eutrema salsugineum HOM05D006382 ORTHO05D008938 3.0e-216 755.4 527 69.3
Peaxi162Scf00020g01516 Petunia axillaris HOM05D006382 ORTHO05D008938 6.7e-216 754.2 521 70.6
Eucgr.D02325 Eucalyptus grandis HOM05D006382 ORTHO05D008938 1.5e-215 753.1 523 70.6
Aqoxy7G00230 Aquilegia oxysepala HOM05D006382 ORTHO05D008938 1.3e-214 750.0 464 77.4
AUR62004414 Chenopodium quinoa HOM05D006382 ORTHO05D008938 2.8e-214 748.8 534 68.0
VMungo1383G3370 Vigna mungo HOM05D006382 ORTHO05D008938 3.7e-214 748.4 502 70.3
Carub.0005s2823 Capsella rubella HOM05D006382 ORTHO05D008938 4.8e-214 748.0 510 69.8
Nn1g01689 Nelumbo nucifera HOM05D006382 ORTHO05D008938 6.2e-214 747.7 505 72.3
Phvul.008G058200 Phaseolus vulgaris HOM05D006382 ORTHO05D008938 8.2e-214 747.3 491 71.7
Sp5g01870 Schrenkiella parvula HOM05D006382 ORTHO05D008938 1.8e-213 746.1 529 68.1
Medtr7g079030 Medicago truncatula HOM05D006382 ORTHO05D008938 3.1e-213 745.3 522 69.3
Cc02_g38570 Coffea canephora HOM05D006382 ORTHO05D008938 5.3e-213 744.6 532 70.1
C06p27550 Brassica napus HOM05D006382 ORTHO05D008938 1.2e-212 743.4 506 70.4
AL5G43900 Arabidopsis lyrata HOM05D006382 ORTHO05D008938 1.5e-212 743.0 468 73.5
BcaC08g45134 Brassica carinata HOM05D006382 ORTHO05D008938 2.0e-212 742.7 521 68.7
BolC6t37923H Brassica oleracea HOM05D006382 ORTHO05D008938 4.5e-212 741.5 506 70.2
BcaB02g07372 Brassica carinata HOM05D006382 ORTHO05D008938 7.6e-212 740.7 507 70.2
THA.LOC104827604 Tarenaya hassleriana HOM05D006382 ORTHO05D008938 1.0e-211 740.3 514 69.5
A07p25560 Brassica napus HOM05D006382 ORTHO05D008938 1.7e-211 739.6 524 68.7
BraA07t30197Z Brassica rapa HOM05D006382 ORTHO05D008938 1.7e-211 739.6 524 68.3
HanXRQChr17g0562131 Helianthus annuus HOM05D006382 ORTHO05D008938 1.7e-211 739.6 466 74.0
CARHR171860 Cardamine hirsuta HOM05D006382 ORTHO05D008938 2.2e-211 739.2 530 68.1
Sc01g0003200 Simmondsia chinensis HOM05D006382 ORTHO05D008938 2.9e-211 738.8 527 67.0
CANSAT56G1207 Cannabis sativa HOM05D006382 ORTHO05D008938 3.8e-211 738.4 491 72.5
FAN06G0271 Fragaria x ananassa HOM05D006382 ORTHO05D008938 4.9e-211 738.0 471 74.9
Glyma.09G254600 Glycine max HOM05D006382 ORTHO05D008938 8.4e-211 737.3 488 71.1
Psat3g105480 Pisum sativum HOM05D006382 ORTHO05D008938 8.4e-211 737.3 526 67.9
Glyma.18G238400 Glycine max HOM05D006382 ORTHO05D008938 4.2e-210 734.9 488 70.7
TPR.G35789 Trifolium pratense HOM05D006382 ORTHO05D008938 5.5e-210 734.6 518 69.7
PSO384G0256 Papaver somniferum HOM05D006382 ORTHO05D008938 1.2e-209 733.4 499 71.1
AT3G61540 Arabidopsis thaliana HOM05D006382 ORTHO05D008938 2.1e-209 732.6 530 68.1
PSO266G0056 Papaver somniferum HOM05D006382 ORTHO05D008938 4.6e-209 731.5 520 69.4
arahy.Tifrunner.gnm1.ann1.FF5BCH Arachis hypogaea HOM05D006382 ORTHO05D008938 1.0e-208 730.3 500 69.6
ECA234G1133 Erigeron canadensis HOM05D006382 ORTHO05D008938 1.8e-208 729.6 472 72.7
MBI06_g33533_MAGBIO Magnolia biondii HOM05D006382 ORTHO05D008938 3.0e-208 728.8 462 73.8
arahy.Tifrunner.gnm1.ann1.Z348XU Arachis hypogaea HOM05D006382 ORTHO05D008938 1.9e-207 726.1 527 67.4
DCAR_005361 Daucus carota HOM05D006382 ORTHO05D008938 9.7e-207 723.8 492 69.1
Ca_07943_v3 Cicer arietinum L. HOM05D006382 ORTHO05D008938 1.1e-205 720.3 453 73.5
HPP92_008800 Vanilla planifolia HOM05D006382 ORTHO05D008938 2.9e-203 712.2 459 71.5
CDE10G0280 Ceratophyllum demersum HOM05D006382 ORTHO05D008938 6.5e-203 711.1 485 68.7
ATR0721G029 Amborella trichopoda HOM05D006382 ORTHO05D008938 9.4e-202 707.2 456 73.2
Lsat_1_v5_gn_4_35160 Lactuca sativa HOM05D006382 ORTHO05D008938 5.3e-197 691.4 513 66.7
Aa31LG10G15440 Aethionema arabicum HOM05D006382 ORTHO05D008938 1.1e-191 673.7 468 69.4
CANSAT56G3955 Cannabis sativa HOM05D006382 ORTHO05D008938 7.7e-188 661.0 473 67.0
AUR62022620 Chenopodium quinoa HOM05D006382 ORTHO05D008938 1.4e-184 650.2 503 63.0
COL.COLO4_12779 Corchorus olitorius HOM05D006382 ORTHO05D008938 2.6e-180 636.0 476 67.0
unitig_747.g21323 Utricularia gibba HOM05D000887 ORTHO05D000908 4.5e-180 635.2 515 62.3
Pp3c20_22770 Physcomitrium patens HOM05D006382 ORTHO05D008938 1.9e-178 629.8 459 63.0
Ah.05g180140 Amaranthus hybridus HOM05D006382 ORTHO05D008938 2.5e-178 629.4 471 64.3
Manes.05G029200 Manihot esculenta HOM05D006382 ORTHO05D008938 4.4e-175 618.6 406 74.4
Mapoly0179s0013 Marchantia polymorpha HOM05D006382 ORTHO05D008938 1.7e-174 616.7 461 61.4
CAN.G78.131 Capsicum annuum HOM05D006382 ORTHO05D008938 9.1e-173 610.9 376 76.1
SMO134G0292 Selaginella moellendorffii HOM05D006382 ORTHO05D008938 1.6e-172 610.1 458 62.2
Gohir.D11G097200 Gossypium hirsutum HOM05D006382 ORTHO05D008938 3.8e-171 605.5 412 71.6
Migut.B01800 Erythranthe guttata HOM05D006382 ORTHO05D008938 2.0e-167 593.2 533 58.9
TAR629G1903 Trochodendron aralioides HOM05D006382 ORTHO05D008938 5.6e-146 521.9 315 78.1
Oeu063676.1 Olea europaea HOM05D006382 ORTHO05D008938 1.1e-138 497.7 492 55.1
Cre03.g193700 Chlamydomonas reinhardtii HOM05D006382 ORTHO05D008938 2.9e-126 456.4 486 47.7
Potri.014G090601 Populus trichocarpa HOM05D006382 ORTHO05D008938 8.4e-126 454.9 321 70.7
MCO14G065 Micromonas commoda HOM05D006382 ORTHO05D008938 3.1e-112 409.8 488 45.7
Zm00001eb375690 Zea mays HOM05D006382 ORTHO05D008938 9.6e-106 388.3 270 67.4
PRCOL_00004635 Prasinoderma coloniale HOM05D006382 ORTHO05D008938 1.9e-101 374.0 488 43.9
Cfa025852 Carpinus fangiana HOM05D006382 ORTHO05D008938 6.9e-80 302.4 454 39.4
Os06g0163600 Oryza sativa ssp. japonica HOM05D006382 ORTHO05D008938 2.9e-41 174.1 100 79.0
SMO139G0016 Selaginella moellendorffii HOM05D006382 ORTHO05D376983 9.2e-40 169.1 236 39.4
Hma1.2p1_0036F.1_g022810 Hydrangea macrophylla HOM05D006382 ORTHO05D228417 3.4e-34 150.6 105 69.5
Hma1.2p1_0036F.1_g022815 Hydrangea macrophylla HOM05D006382 ORTHO05D228242 3.4e-34 150.6 105 69.5
Hma1.2p1_0515F.1_g170355 Hydrangea macrophylla HOM05D006382 ORTHO05D228454 3.4e-34 150.6 105 69.5
Hma1.2p1_1019F.1_g248455 Hydrangea macrophylla HOM05D006382 ORTHO05D228422 3.4e-34 150.6 105 69.5
SMO165G0168 Selaginella moellendorffii HOM05D006382 ORTHO05D374182 8.1e-28 129.4 290 32.1
BolC4t24936H Brassica oleracea HOM05D006382 ORTHO05D024383 4.9e-25 120.2 87 62.1
C04p33670 Brassica napus HOM05D006382 ORTHO05D024383 4.4e-18 97.1 66 66.7
BcaB04g18088 Brassica carinata HOM05D006382 ORTHO05D024383 3.6e-12 77.4 43 86.0
CsaV3_3G008600 Cucumis sativus L. HOM05D006382 ORTHO05D172594 2.4e-08 64.7 40 67.5
Actinidia17930 Actinidia chinensis HOM05D006382 ORTHO05D008938 7.1e-08 63.2 41 78.0
Ah.05g180150 Amaranthus hybridus HOM05D006382 ORTHO05D060446 1.0e-06 59.3 115 39.1
SMO353G0285 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 1.3e-06 58.9 118 35.6
SMO364G0301 Selaginella moellendorffii HOM05D006483 ORTHO05D007837 2.3e-06 58.2 118 35.6


User provided reference genes

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