Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031242 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 1.8e-73 280.0 258 100.0
CSS0039488 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 1.1e-70 270.8 258 93.4
CSS0048626 Camellia sinensis var. sinensis HOM05D013097 ORTHO05D010819 1.4e-36 157.5 258 65.9
ECA238G0402 Erigeron canadensis HOM05D013097 ORTHO05D010819 4.4e-11 72.8 77 57.1
Glyma.01G190900 Glycine max HOM05D008801 ORTHO05D010819 7.5e-11 72.0 75 53.3
Ciclev10026322m.g Citrus clementina HOM05D008801 ORTHO05D010819 9.8e-11 71.6 74 54.1
Glyma.11G051300 Glycine max HOM05D008801 ORTHO05D010819 4.8e-10 69.3 75 52.0
Carub.0007s0283 Capsella rubella HOM05D010159 ORTHO05D012416 1.8e-09 67.4 71 52.1
Ca_24714_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 2.4e-09 67.0 77 57.1
Ca_24729_v3 Cicer arietinum L. HOM05D008801 ORTHO05D010819 2.4e-09 67.0 77 57.1
Phvul.002G014100 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 7.0e-09 65.5 75 48.0
VMungo1215G0318 Vigna mungo HOM05D008801 ORTHO05D010819 2.0e-08 63.9 75 48.0
arahy.Tifrunner.gnm1.ann1.N2JMJ4 Arachis hypogaea HOM05D008801 ORTHO05D010819 4.5e-08 62.8 76 48.7
Glyma.05G102100 Glycine max HOM05D008801 ORTHO05D010819 4.5e-08 62.8 75 56.0
TPR.G26876 Trifolium pratense HOM05D008801 ORTHO05D010819 4.5e-08 62.8 76 50.0
AT4G37450 Arabidopsis thaliana HOM05D010159 ORTHO05D012416 5.9e-08 62.4 77 48.1
Phvul.003G238200 Phaseolus vulgaris HOM05D008801 ORTHO05D010819 1.3e-07 61.2 58 55.2
THA.LOC104807612 Tarenaya hassleriana HOM05D008801 ORTHO05D010819 1.3e-07 61.2 77 49.4
TWI53G1246 Tripterygium wilfordii HOM05D013097 ORTHO05D010819 1.7e-07 60.8 75 57.3
MELO3C007601.2 Cucumis melo HOM05D022074 ORTHO05D028887 2.2e-07 60.5 67 59.7
Gohir.A11G218200 Gossypium hirsutum HOM05D008801 ORTHO05D010819 2.2e-07 60.5 69 53.6
Aa31LG6G14310 Aethionema arabicum HOM05D010159 ORTHO05D012416 8.5e-07 58.5 70 50.0
AT2G23130 Arabidopsis thaliana HOM05D010159 ORTHO05D016615 8.5e-07 58.5 75 52.0
arahy.Tifrunner.gnm1.ann1.EBVI20 Arachis hypogaea HOM05D008801 ORTHO05D010819 8.5e-07 58.5 79 45.6
Cc07_g06680 Coffea canephora HOM05D013097 ORTHO05D023795 8.5e-07 58.5 277 47.3
Dinv30057 Davidia involucrata HOM05D013097 ORTHO05D026344 2.5e-06 57.0 73 52.1
CiPaw.02G005000 Carya illinoinensis HOM05D013097 ORTHO05D010819 3.2e-06 56.6 51 52.9
Duzib187G0657 Durio zibethinus HOM05D008801 ORTHO05D010819 3.2e-06 56.6 58 51.7
Gohir.D12G072500 Gossypium hirsutum HOM05D008801 ORTHO05D010819 3.2e-06 56.6 61 54.1
Gorai.008G079800 Gossypium raimondii HOM05D008801 ORTHO05D010819 3.2e-06 56.6 61 54.1
Manes.12G113000 Manihot esculenta HOM05D008801 ORTHO05D010819 9.4e-06 55.1 58 51.7
Hund13925 Selenicereus undatus HOM05D017711 ORTHO05D021203 9.4e-06 55.1 52 51.9


User provided reference genes

Program Settings