Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031203 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 1.1e-40 169.5 85 100.0
CSS0012709 Camellia sinensis var. sinensis HOM05D003845 ORTHO05D004161 4.0e-30 134.4 69 98.6
Actinidia36313 Actinidia chinensis HOM05D003845 ORTHO05D004161 2.9e-28 128.3 69 92.8
vmacro05567 Vaccinium macrocarpon HOM05D003845 ORTHO05D004161 1.1e-27 126.3 67 94.0
Dinv33933 Davidia involucrata HOM05D003845 ORTHO05D004161 1.9e-27 125.6 69 92.8
Hma1.2p1_0136F.1_g062170 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 3.2e-27 124.8 69 92.8
Hma1.2p1_0136F.1_g062180 Hydrangea macrophylla HOM05D003845 ORTHO05D004161 3.2e-27 124.8 69 92.8
Lsat_1_v5_gn_4_153700 Lactuca sativa HOM05D003845 ORTHO05D004161 4.2e-27 124.4 69 92.8
TAR629G0674 Trochodendron aralioides HOM05D003845 ORTHO05D004161 7.1e-27 123.6 69 89.9
ECA232G1957 Erigeron canadensis HOM05D003845 ORTHO05D004161 9.3e-27 123.2 69 91.3
QL02p051715 Quercus lobata HOM05D003845 ORTHO05D004161 9.3e-27 123.2 69 91.3
GSVIVG01031064001 Vitis vinifera HOM05D003845 ORTHO05D004161 1.6e-26 122.5 69 89.9
Eucgr.F02484 Eucalyptus grandis HOM05D003845 ORTHO05D004161 2.7e-26 121.7 69 89.9
RcHm_v2.0_Chr2g0162941 Rosa chinensis HOM05D003845 ORTHO05D004161 3.5e-26 121.3 69 89.9
CiPaw.04G040900 Carya illinoinensis HOM05D003845 ORTHO05D004161 6.0e-26 120.6 69 87.0
MD12G1002400 Malus domestica HOM05D003845 ORTHO05D004161 6.0e-26 120.6 69 88.4
Atru.chr8.887 Acer truncatum HOM05D003845 ORTHO05D004161 7.9e-26 120.2 69 92.8
FvH4_6g45230 Fragaria vesca HOM05D003845 ORTHO05D004161 7.9e-26 120.2 69 88.4
FAN02G2813 Fragaria x ananassa HOM05D003845 ORTHO05D004161 1.0e-25 119.8 67 89.6
Lalb_Chr21g0317871 Lupinus albus HOM05D003845 ORTHO05D004161 1.0e-25 119.8 67 88.1
Potri.004G101250 Populus trichocarpa HOM05D003845 ORTHO05D004161 1.0e-25 119.8 69 89.9
Prupe.7G002300 Prunus persica HOM05D003845 ORTHO05D004161 1.0e-25 119.8 69 88.4
Gohir.A07G071701 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.3e-25 119.4 69 89.9
Gorai.001G080300 Gossypium raimondii HOM05D003845 ORTHO05D004161 1.3e-25 119.4 69 89.9
SGA_v2.0_scaffold33G13453 Striga asiatica HOM05D003845 ORTHO05D004161 1.3e-25 119.4 69 85.5
Lj2C445G6 Lonicera japonica HOM05D003845 ORTHO05D004161 1.8e-25 119.0 69 89.9
TWI53G0876 Tripterygium wilfordii HOM05D003845 ORTHO05D004161 1.8e-25 119.0 69 87.0
MD14G1001900 Malus domestica HOM05D003845 ORTHO05D004161 2.3e-25 118.6 69 87.0
SalBow3G0178 Salvia bowleyana HOM05D003845 ORTHO05D004161 2.3e-25 118.6 69 87.0
CANSAT64G2814 Cannabis sativa HOM05D003845 ORTHO05D004161 3.0e-25 118.2 69 87.0
HanXRQChr14g0438731 Helianthus annuus HOM05D003845 ORTHO05D004161 3.0e-25 118.2 69 88.4
Manes.02G067500 Manihot esculenta HOM05D003845 ORTHO05D004161 5.1e-25 117.5 69 89.9
Nn4g23790 Nelumbo nucifera HOM05D003845 ORTHO05D004161 5.1e-25 117.5 69 87.0
AUR62014525 Chenopodium quinoa HOM05D003845 ORTHO05D004161 6.7e-25 117.1 69 84.1
Duzib133G1200 Durio zibethinus HOM05D003845 ORTHO05D004161 6.7e-25 117.1 69 88.4
Sc23g0006880 Simmondsia chinensis HOM05D003845 ORTHO05D004161 6.7e-25 117.1 69 84.1
THA.LOC104805559 Tarenaya hassleriana HOM05D003845 ORTHO05D004161 8.7e-25 116.7 70 81.4
Gohir.D07G076100 Gossypium hirsutum HOM05D003845 ORTHO05D004161 1.1e-24 116.3 69 88.4
Oeu052985.1 Olea europaea HOM05D003845 ORTHO05D004161 1.1e-24 116.3 69 87.0
EL10Ac2g04592 Beta vulgaris HOM05D003845 ORTHO05D004161 1.9e-24 115.5 69 84.1
Dinv34837 Davidia involucrata HOM05D003845 ORTHO05D004161 1.9e-24 115.5 68 86.8
Sp5g22090 Schrenkiella parvula HOM05D003845 ORTHO05D004161 1.9e-24 115.5 70 80.0
Aa31LG2G3530 Aethionema arabicum HOM05D003845 ORTHO05D004161 4.3e-24 114.4 70 78.6
Aqoxy3G03940 Aquilegia oxysepala HOM05D003845 ORTHO05D004161 4.3e-24 114.4 69 84.1
AL2G25520 Arabidopsis lyrata HOM05D003845 ORTHO05D004161 4.3e-24 114.4 70 78.6
AT1G67140 Arabidopsis thaliana HOM05D003845 ORTHO05D004161 4.3e-24 114.4 70 78.6
CARHR059600 Cardamine hirsuta HOM05D003845 ORTHO05D004161 4.3e-24 114.4 70 78.6
ClCG11G005440 Citrullus lanatus HOM05D003845 ORTHO05D004161 4.3e-24 114.4 69 85.5
CsaV3_5G039200 Cucumis sativus L. HOM05D003845 ORTHO05D004161 5.6e-24 114.0 69 85.5
arahy.Tifrunner.gnm1.ann1.4V7WUF Arachis hypogaea HOM05D003845 ORTHO05D004161 9.6e-24 113.2 67 85.1
arahy.Tifrunner.gnm1.ann1.UJVA95 Arachis hypogaea HOM05D003845 ORTHO05D004161 9.6e-24 113.2 67 85.1
Ah.10g037590 Amaranthus hybridus HOM05D003845 ORTHO05D004161 1.3e-23 112.8 69 81.2
Cc07_g08900 Coffea canephora HOM05D003845 ORTHO05D004161 1.3e-23 112.8 69 85.5
Carub.0002s1343 Capsella rubella HOM05D003845 ORTHO05D004161 1.6e-23 112.5 68 79.4
Thecc.04G136100 Theobroma cacao HOM05D003845 ORTHO05D004161 1.6e-23 112.5 69 85.5
Thhalv10017993m.g Eutrema salsugineum HOM05D003845 ORTHO05D004161 2.1e-23 112.1 70 77.1
Sed0012635 Sechium edule HOM05D003845 ORTHO05D004161 2.1e-23 112.1 69 84.1
A07p33800 Brassica napus HOM05D003845 ORTHO05D004161 2.8e-23 111.7 69 79.7
C06p43130 Brassica napus HOM05D003845 ORTHO05D004161 2.8e-23 111.7 69 79.7
BolC6t39126H Brassica oleracea HOM05D003845 ORTHO05D004161 2.8e-23 111.7 69 79.7
BraA07t31006Z Brassica rapa HOM05D003845 ORTHO05D004161 2.8e-23 111.7 69 79.7
Lj1g0009000 Lotus japonicus HOM05D003845 ORTHO05D004161 2.8e-23 111.7 67 83.6
MELO3C022095.2 Cucumis melo HOM05D003845 ORTHO05D004161 3.7e-23 111.3 69 84.1
ATR0564G046 Amborella trichopoda HOM05D003845 ORTHO05D004161 8.2e-23 110.2 65 83.1
PSO063G7466 Papaver somniferum HOM05D003845 ORTHO05D004161 1.1e-22 109.8 69 79.7
Psat3g206280 Pisum sativum HOM05D003845 ORTHO05D004161 1.1e-22 109.8 67 80.6
Medtr7g406950 Medicago truncatula HOM05D003845 ORTHO05D004161 1.4e-22 109.4 67 80.6
Glyma.18G297900 Glycine max HOM05D003845 ORTHO05D004161 1.8e-22 109.0 67 82.1
Migut.H00208 Erythranthe guttata HOM05D003845 ORTHO05D004161 2.4e-22 108.6 67 79.1
Ca_04077_v3 Cicer arietinum L. HOM05D003845 ORTHO05D004161 3.1e-22 108.2 67 79.1
Nitab4.5_0001569g0050 Nicotiana tabacum HOM05D003845 ORTHO05D004161 9.0e-22 106.7 69 81.2
CAN.G625.4 Capsicum annuum HOM05D003845 ORTHO05D004161 1.2e-21 106.3 69 79.7
Peaxi162Scf00814g00242 Petunia axillaris HOM05D003845 ORTHO05D004161 1.2e-21 106.3 69 79.7
Sopen02g030490 Solanum pennellii HOM05D003845 ORTHO05D004161 1.2e-21 106.3 69 79.7
VMungo1383G2489 Vigna mungo HOM05D003845 ORTHO05D004161 1.2e-21 106.3 67 79.1
Phvul.008G004700 Phaseolus vulgaris HOM05D003845 ORTHO05D004161 2.6e-21 105.1 67 79.1
Solyc02g085810.3 Solanum lycopersicum HOM05D003845 ORTHO05D004161 2.6e-21 105.1 69 78.3
Os06g0505302 Oryza sativa ssp. japonica HOM05D003845 ORTHO05D004161 7.6e-21 103.6 68 76.5
CDE02G0049 Ceratophyllum demersum HOM05D003845 ORTHO05D004161 1.3e-20 102.8 71 73.2
Zm00001eb382690 Zea mays HOM05D003845 ORTHO05D004161 1.7e-20 102.4 68 76.5
unitig_899.g14511 Utricularia gibba HOM05D003845 ORTHO05D004161 8.4e-20 100.1 69 69.6
PGR004G1392 Punica granatum HOM05D003845 ORTHO05D004161 2.5e-19 98.6 57 84.2
Actinidia20836 Actinidia chinensis HOM05D004442 ORTHO05D002066 9.3e-19 96.7 67 77.6
AUR62008978 Chenopodium quinoa HOM05D003845 ORTHO05D004161 3.5e-18 94.7 57 77.2
HPP92_003934 Vanilla planifolia HOM05D003845 ORTHO05D004161 2.3e-17 92.0 68 67.6
SHI17842 Sapria himalayana HOM05D003845 ORTHO05D004161 1.5e-16 89.4 68 70.6
SEGI_31548 Sequoiadendron giganteum HOM05D003845 ORTHO05D004161 1.5e-16 89.4 67 65.7
Mapoly0101s0033 Marchantia polymorpha HOM05D003845 ORTHO05D004161 5.7e-16 87.4 69 63.8
AagrBONN_evm.TU.Sc2ySwM_368.2329__2330 Anthoceros agrestis HOM05D003845 ORTHO05D004161 2.2e-15 85.5 68 60.3
Lsat_1_v5_gn_3_65920 Lactuca sativa HOM05D003845 ORTHO05D004161 4.8e-15 84.3 50 86.0
Lsat_1_v5_gn_4_179241 Lactuca sativa HOM05D003845 ORTHO05D004161 4.8e-15 84.3 50 86.0
Lsat_1_v5_gn_5_95120 Lactuca sativa HOM05D000020 ORTHO05D000543 4.8e-15 84.3 50 86.0
Lsat_1_v5_gn_8_163720 Lactuca sativa HOM05D003845 ORTHO05D004161 4.8e-15 84.3 50 86.0
Lsat_1_v5_gn_8_43240 Lactuca sativa HOM05D003845 ORTHO05D004161 4.8e-15 84.3 50 86.0
Nitab4.5_0002288g0020 Nicotiana tabacum HOM05D003845 ORTHO05D004161 1.1e-14 83.2 53 79.2
Pp3c15_3000 Physcomitrium patens HOM05D003845 ORTHO05D004161 1.8e-14 82.4 69 63.8
CBR_g31193 Chara braunii HOM05D003845 ORTHO05D004161 6.9e-14 80.5 69 60.9
FAN14G4373 Fragaria x ananassa HOM05D003845 ORTHO05D004161 6.9e-14 80.5 42 92.9
Actinidia20850 Actinidia chinensis HOM05D003845 ORTHO05D004161 6.5e-12 73.9 47 78.7
SMO239G0031 Selaginella moellendorffii HOM05D003845 ORTHO05D004161 6.7e-09 63.9 85 41.2
FAN09G0938 Fragaria x ananassa HOM05D003845 ORTHO05D004161 4.1e-06 54.7 28 92.9


User provided reference genes

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