Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031191 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 5.3e-245 850.5 409 100.0
Actinidia04269 Actinidia chinensis HOM05D007151 ORTHO05D009056 4.4e-199 698.0 401 82.3
Actinidia04263 Actinidia chinensis HOM05D007151 ORTHO05D009056 1.6e-196 689.5 404 81.2
vmacro21874 Vaccinium macrocarpon HOM05D007151 ORTHO05D009056 8.6e-195 683.7 404 80.7
GSVIVG01001047001 Vitis vinifera HOM05D007151 ORTHO05D009056 3.6e-185 651.7 400 77.8
TAR626G0740 Trochodendron aralioides HOM05D007151 ORTHO05D009056 4.6e-180 634.8 401 73.1
Cfa020867 Carpinus fangiana HOM05D007151 ORTHO05D009056 4.3e-178 628.2 401 74.3
CSS0035136 Camellia sinensis var. sinensis HOM05D007151 ORTHO05D009056 1.1e-176 623.6 300 100.0
QL02p091761 Quercus lobata HOM05D007151 ORTHO05D009056 1.1e-176 623.6 401 73.1
Dinv41414 Davidia involucrata HOM05D007151 ORTHO05D009056 9.9e-175 617.1 369 78.3
Peaxi162Scf00347g00330 Petunia axillaris HOM05D007151 ORTHO05D009056 1.4e-173 613.2 398 72.6
Haze_19293 Corylus avellana HOM05D007151 ORTHO05D009056 2.4e-173 612.5 401 73.8
Atru.chr7.189 Acer truncatum HOM05D007151 ORTHO05D009056 5.4e-173 611.3 399 71.9
Cpa.g.sc46.106 Carica papaya HOM05D007151 ORTHO05D009056 1.6e-172 609.8 399 71.9
TWI34G1895 Tripterygium wilfordii HOM05D007151 ORTHO05D009056 3.0e-171 605.5 398 72.4
CiPaw.15G171100 Carya illinoinensis HOM05D007151 ORTHO05D009056 5.1e-171 604.7 401 71.8
Nn8g39757 Nelumbo nucifera HOM05D007151 ORTHO05D009056 6.6e-171 604.4 401 70.6
Nitab4.5_0000416g0100 Nicotiana tabacum HOM05D007151 ORTHO05D009056 1.5e-170 603.2 404 71.3
PGSC0003DMG400011834 Solanum tuberosum HOM05D007151 ORTHO05D009056 5.6e-170 601.3 404 70.5
Manes.06G039800 Manihot esculenta HOM05D007151 ORTHO05D009056 7.3e-170 600.9 399 71.7
Nitab4.5_0010178g0030 Nicotiana tabacum HOM05D007151 ORTHO05D009056 7.3e-170 600.9 404 71.5
Sabra18G0095800 Salix brachista HOM05D007151 ORTHO05D009056 9.6e-170 600.5 400 71.8
Thecc.09G036700 Theobroma cacao HOM05D007151 ORTHO05D009056 2.8e-169 599.0 401 71.1
CANSAT11G1483 Cannabis sativa HOM05D007151 ORTHO05D009056 4.7e-169 598.2 401 68.3
CAN.G520.35 Capsicum annuum HOM05D007151 ORTHO05D009056 1.1e-168 597.0 404 69.6
Sed0008117 Sechium edule HOM05D007151 ORTHO05D009056 1.4e-168 596.7 398 70.6
Solyc07g005240.4 Solanum lycopersicum HOM05D007151 ORTHO05D009056 1.8e-168 596.3 404 69.8
MD02G1011800 Malus domestica HOM05D007151 ORTHO05D009056 2.4e-168 595.9 405 70.4
Duzib168G1221 Durio zibethinus HOM05D007151 ORTHO05D009056 3.1e-168 595.5 401 71.1
Lj9A711T48 Lonicera japonica HOM05D007151 ORTHO05D009056 9.0e-168 594.0 407 70.5
ClCG06G012110 Citrullus lanatus HOM05D007151 ORTHO05D009056 1.5e-167 593.2 400 72.0
Prupe.7G252600 Prunus persica HOM05D007151 ORTHO05D009056 1.5e-167 593.2 403 68.7
ECA234G3390 Erigeron canadensis HOM05D000399 ORTHO05D000304 9.9e-167 590.5 398 69.3
DCAR_019364 Daucus carota HOM05D007151 ORTHO05D009056 1.7e-166 589.7 400 69.5
Ciclev10008285m.g Citrus clementina HOM05D007151 ORTHO05D009056 1.9e-165 586.3 400 69.2
CsaV3_1G028600 Cucumis sativus L. HOM05D007151 ORTHO05D009056 2.4e-165 585.9 398 69.8
Gorai.013G218000 Gossypium raimondii HOM05D007151 ORTHO05D009056 5.4e-165 584.7 404 69.8
Gohir.A13G185600 Gossypium hirsutum HOM05D007151 ORTHO05D009056 9.3e-165 583.9 404 69.6
Potri.018G112600 Populus trichocarpa HOM05D007151 ORTHO05D009056 1.2e-164 583.6 401 70.6
Gohir.D13G192100 Gossypium hirsutum HOM05D007151 ORTHO05D009056 2.1e-164 582.8 404 69.6
COL.COLO4_18747 Corchorus olitorius HOM05D007151 ORTHO05D009056 4.6e-164 581.6 413 67.6
Aqoxy7G03505 Aquilegia oxysepala HOM05D007151 ORTHO05D009056 6.0e-164 581.3 398 67.3
RcHm_v2.0_Chr2g0086401 Rosa chinensis HOM05D007151 ORTHO05D009056 1.0e-163 580.5 401 68.6
Cc06_g23440 Coffea canephora HOM05D007151 ORTHO05D009056 1.7e-163 579.7 404 67.6
FAN26G2518 Fragaria x ananassa HOM05D007151 ORTHO05D009056 8.7e-163 577.4 401 68.8
HanXRQChr10g0314511 Helianthus annuus HOM05D007151 ORTHO05D009056 1.5e-162 576.6 400 68.2
FvH4_1g01491 Fragaria vesca HOM05D007151 ORTHO05D009056 3.3e-162 575.5 401 68.3
Lsat_1_v5_gn_0_44621 Lactuca sativa HOM05D007151 ORTHO05D009056 9.6e-162 573.9 400 68.0
Lsat_1_v5_gn_5_90740 Lactuca sativa HOM05D007151 ORTHO05D009056 9.6e-162 573.9 400 68.0
Eucgr.C00404 Eucalyptus grandis HOM05D007151 ORTHO05D009056 1.3e-161 573.5 398 68.6
Oeu052172.1 Olea europaea HOM05D007151 ORTHO05D009056 4.8e-161 571.6 405 65.7
PGR142G3459 Punica granatum HOM05D007151 ORTHO05D009056 8.1e-161 570.9 402 68.2
A03p51030 Brassica napus HOM05D007151 ORTHO05D009056 4.5e-159 565.1 400 67.2
AT2G22650 Arabidopsis thaliana HOM05D007151 ORTHO05D009056 5.8e-159 564.7 401 65.8
Migut.K00359 Erythranthe guttata HOM05D007151 ORTHO05D009056 1.9e-157 559.7 400 65.2
THA.LOC104826576 Tarenaya hassleriana HOM05D007151 ORTHO05D009056 2.4e-157 559.3 403 65.3
Lj6g0019652 Lotus japonicus HOM05D007151 ORTHO05D009056 4.2e-157 558.5 401 65.1
BraA03t14189Z Brassica rapa HOM05D007151 ORTHO05D009056 9.3e-157 557.4 400 67.0
Thhalv10025257m.g Eutrema salsugineum HOM05D007151 ORTHO05D009056 2.7e-156 555.8 408 65.7
Hund21618 Selenicereus undatus HOM05D007151 ORTHO05D009056 3.0e-155 552.4 404 63.4
AL3G44210 Arabidopsis lyrata HOM05D007151 ORTHO05D009056 3.9e-155 552.0 402 65.4
C07p49460 Brassica napus HOM05D007151 ORTHO05D009056 1.9e-154 549.7 400 65.8
FAN23G0937 Fragaria x ananassa HOM05D007151 ORTHO05D009056 3.3e-154 548.9 425 63.5
MELO3C010253.2 Cucumis melo HOM05D007151 ORTHO05D009056 1.3e-153 547.0 398 66.6
BolC7t45451H Brassica oleracea HOM05D007151 ORTHO05D009056 4.8e-153 545.0 400 65.2
Glyma.15G208200 Glycine max HOM05D007151 ORTHO05D009056 8.1e-153 544.3 398 63.8
Psat1g022920 Pisum sativum HOM05D007151 ORTHO05D009056 1.2e-151 540.4 399 63.4
PSO063G2965 Papaver somniferum HOM05D007151 ORTHO05D009056 1.5e-151 540.0 412 63.1
CARHR104080 Cardamine hirsuta HOM05D007151 ORTHO05D009056 2.6e-151 539.3 398 64.8
Aa31sc130G90 Aethionema arabicum HOM05D007151 ORTHO05D009056 4.5e-151 538.5 400 64.2
EL10Ac8g18840 Beta vulgaris HOM05D007151 ORTHO05D009056 2.2e-150 536.2 407 63.6
VMungo1309G1509 Vigna mungo HOM05D007151 ORTHO05D009056 3.8e-150 535.4 398 63.8
TPR.G31930 Trifolium pratense HOM05D007151 ORTHO05D009056 9.3e-149 530.8 417 61.2
Rhsim01G0049000 Rhododendron simsii HOM05D007151 ORTHO05D008498 1.6e-148 530.0 356 73.9
arahy.Tifrunner.gnm1.ann1.BVF972 Arachis hypogaea HOM05D007151 ORTHO05D009056 2.7e-148 529.3 399 62.9
Medtr2g449830 Medicago truncatula HOM05D007151 ORTHO05D009056 3.5e-148 528.9 401 61.3
Sp7g16040 Schrenkiella parvula HOM05D007151 ORTHO05D009056 2.5e-146 522.7 400 63.5
Sopen07g001150 Solanum pennellii HOM05D007151 ORTHO05D009056 5.6e-146 521.5 360 68.6
Sc08g0005090 Simmondsia chinensis HOM05D007151 ORTHO05D009056 7.4e-146 521.2 400 65.2
SGA_v2.0_scaffold336G49159 Striga asiatica HOM05D007151 ORTHO05D009056 2.0e-143 513.1 398 61.1
AUR62042027 Chenopodium quinoa HOM05D007151 ORTHO05D009056 2.6e-143 512.7 404 61.4
arahy.Tifrunner.gnm1.ann1.36BD1U Arachis hypogaea HOM05D007151 ORTHO05D009056 3.5e-140 502.3 375 63.2
Phvul.009G208100 Phaseolus vulgaris HOM05D007151 ORTHO05D009056 4.6e-140 501.9 398 62.1
Ah.14g078500 Amaranthus hybridus HOM05D007151 ORTHO05D009056 2.6e-135 486.1 405 60.5
Os06g0181400 Oryza sativa ssp. japonica HOM05D007151 ORTHO05D009056 2.9e-134 482.6 398 57.5
SGA_v2.0_scaffold206G41840 Striga asiatica HOM05D007151 ORTHO05D009056 5.0e-134 481.9 398 59.8
Zm00001eb268060 Zea mays HOM05D007151 ORTHO05D009056 2.5e-133 479.6 397 57.4
CDE05G1962 Ceratophyllum demersum HOM05D007151 ORTHO05D009056 4.2e-133 478.8 398 57.3
SEGI_09059 Sequoiadendron giganteum HOM05D007151 ORTHO05D009056 4.8e-129 465.3 420 56.0
Ca_25731_v3 Cicer arietinum L. HOM05D007151 ORTHO05D009056 2.6e-127 459.5 355 60.3
unitig_899.g15451 Utricularia gibba HOM05D007151 ORTHO05D009056 1.7e-121 440.3 378 57.1
ATR0629G078 Amborella trichopoda HOM05D007151 ORTHO05D009056 7.0e-120 434.9 367 55.3
FvH4_5g35120 Fragaria vesca HOM05D007151 ORTHO05D009056 1.1e-117 427.6 288 67.4
Lalb_Chr08g0233881 Lupinus albus HOM05D007151 ORTHO05D009056 1.6e-116 423.7 297 65.7
Carub.0013s0015 Capsella rubella HOM05D007151 ORTHO05D009056 1.8e-112 410.2 302 65.9
Mapoly0072s0110 Marchantia polymorpha HOM05D007151 ORTHO05D009056 2.1e-108 396.7 415 48.9
Pp3c21_4180 Physcomitrium patens HOM05D007151 ORTHO05D009056 3.3e-93 346.3 409 46.9
Cc06_g23410 Coffea canephora HOM05D007151 ORTHO05D009056 7.3e-69 265.4 271 52.4
AagrBONN_evm.TU.Sc2ySwM_117.1501 Anthoceros agrestis HOM05D007151 ORTHO05D009056 3.7e-65 253.1 307 42.7
PRCOL_00000450 Prasinoderma coloniale HOM05D007151 ORTHO05D009056 7.6e-50 202.2 409 35.2
CANSAT11G0850 Cannabis sativa HOM05D007151 ORTHO05D009056 3.2e-48 196.8 122 71.3
SMO364G0487 Selaginella moellendorffii HOM05D007151 ORTHO05D009056 2.9e-41 173.7 199 46.2
Cre02.g109800 Chlamydomonas reinhardtii HOM05D007151 ORTHO05D009056 4.9e-41 172.9 511 28.8
Lalb_Chr08g0233871 Lupinus albus HOM05D007151 ORTHO05D009056 1.1e-32 145.2 105 66.7
MCO12G285 Micromonas commoda HOM05D007151 ORTHO05D009056 2.1e-28 131.0 495 25.9
HPP92_018514 Vanilla planifolia HOM05D007151 ORTHO05D009056 1.1e-21 108.6 91 57.1
CBR_g19142 Chara braunii HOM05D007151 ORTHO05D009056 1.8e-19 101.3 263 28.5
TPR.G31928 Trifolium pratense HOM05D007151 ORTHO05D009056 1.2e-18 98.6 101 48.5
FAN11G2323 Fragaria x ananassa HOM05D007151 ORTHO05D009056 1.0e-14 85.5 81 51.9
Hma1.2p1_0182F.1_g080700 Hydrangea macrophylla HOM05D007151 ORTHO05D009056 4.8e-12 76.6 44 77.3
FAN07G0026 Fragaria x ananassa HOM05D000007 ORTHO05D005026 9.4e-08 62.4 41 61.0


User provided reference genes

Program Settings