Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031188 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 1.1e-88 330.1 194 100.0
CSS0007798 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 2.3e-65 252.7 196 73.5
Dinv16345 Davidia involucrata HOM05D005910 ORTHO05D007088 1.6e-61 240.0 196 69.4
Hma1.2p1_0124F.1_g058350 Hydrangea macrophylla HOM05D005910 ORTHO05D007088 4.7e-58 228.4 197 68.5
DCAR_019862 Daucus carota HOM05D005910 ORTHO05D007088 1.2e-56 223.8 196 64.8
Actinidia38597 Actinidia chinensis HOM05D005910 ORTHO05D007088 2.0e-56 223.0 192 65.6
Duzib106G1486 Durio zibethinus HOM05D005910 ORTHO05D007088 2.6e-56 222.6 192 66.7
Actinidia17287 Actinidia chinensis HOM05D005910 ORTHO05D007088 3.4e-56 222.2 195 66.7
Rhsim04G0093900 Rhododendron simsii HOM05D005910 ORTHO05D007088 3.4e-56 222.2 199 65.3
Rhsim04G0095300 Rhododendron simsii HOM05D005910 ORTHO05D007088 3.4e-56 222.2 199 65.3
Gohir.D09G124900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 5.7e-56 221.5 192 66.1
Gorai.006G143800 Gossypium raimondii HOM05D005910 ORTHO05D007088 5.7e-56 221.5 192 66.1
Thecc.05G175100 Theobroma cacao HOM05D005910 ORTHO05D007088 7.5e-56 221.1 192 65.6
COL.COLO4_29362 Corchorus olitorius HOM05D005910 ORTHO05D007088 1.7e-55 219.9 192 65.1
Cc06_g15530 Coffea canephora HOM05D005910 ORTHO05D007088 2.8e-55 219.2 193 63.7
Gohir.A09G128900 Gossypium hirsutum HOM05D005910 ORTHO05D007088 2.8e-55 219.2 192 65.6
Manes.09G037701 Manihot esculenta HOM05D005910 ORTHO05D007088 4.1e-54 215.3 192 64.6
Oeu057587.1 Olea europaea HOM05D005910 ORTHO05D007088 5.4e-54 214.9 196 62.8
Lsat_1_v5_gn_2_56160 Lactuca sativa HOM05D005910 ORTHO05D007088 7.0e-54 214.5 191 63.4
BcaC09g48209 Brassica carinata HOM05D005910 ORTHO05D007088 1.2e-53 213.8 198 62.6
BolC1t05270H Brassica oleracea HOM05D005910 ORTHO05D007088 1.2e-53 213.8 198 62.6
Thhalv10022159m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 1.6e-53 213.4 195 62.6
AL3G23640 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 3.5e-53 212.2 199 62.8
AL6G16750 Arabidopsis lyrata HOM05D005910 ORTHO05D007088 3.5e-53 212.2 196 63.8
CARHR206550 Cardamine hirsuta HOM05D005910 ORTHO05D007088 3.5e-53 212.2 196 63.8
Ca_08246_v3 Cicer arietinum L. HOM05D005910 ORTHO05D007088 3.5e-53 212.2 188 64.9
ClCG10G017690 Citrullus lanatus HOM05D005910 ORTHO05D007088 3.5e-53 212.2 191 64.9
MELO3C009607.2 Cucumis melo HOM05D005910 ORTHO05D007088 3.5e-53 212.2 191 64.9
Glyma.16G043900 Glycine max HOM05D005910 ORTHO05D007088 3.5e-53 212.2 189 64.0
Medtr7g085050 Medicago truncatula HOM05D005910 ORTHO05D007088 3.5e-53 212.2 188 64.9
VMungo1383G3424 Vigna mungo HOM05D005910 ORTHO05D007088 3.5e-53 212.2 188 64.4
Thhalv10016091m.g Eutrema salsugineum HOM05D005910 ORTHO05D007088 4.5e-53 211.8 192 64.1
Lalb_Chr22g0359441 Lupinus albus HOM05D005910 ORTHO05D007088 4.5e-53 211.8 188 64.9
Phvul.001G097100 Phaseolus vulgaris HOM05D005910 ORTHO05D007088 4.5e-53 211.8 188 63.8
Psat3g091080 Pisum sativum HOM05D005910 ORTHO05D007088 4.5e-53 211.8 188 64.4
TPR.G5912 Trifolium pratense HOM05D005910 ORTHO05D007088 4.5e-53 211.8 188 64.9
Carub.0006s0554 Capsella rubella HOM05D005910 ORTHO05D007088 5.9e-53 211.5 196 63.3
AT3G12030 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.0e-52 210.7 199 62.8
BraA01t04144Z Brassica rapa HOM05D005910 ORTHO05D007088 1.0e-52 210.7 198 62.1
FAN02G0902 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.0e-52 210.7 193 63.7
Glyma.19G108300 Glycine max HOM05D005910 ORTHO05D007088 1.0e-52 210.7 188 63.8
Sp3g10260 Schrenkiella parvula HOM05D005910 ORTHO05D007088 1.0e-52 210.7 198 62.1
AT5G06660 Arabidopsis thaliana HOM05D005910 ORTHO05D007088 1.3e-52 210.3 196 63.8
Cpa.g.sc85.46 Carica papaya HOM05D005910 ORTHO05D007088 1.3e-52 210.3 196 63.8
FvH4_6g21840 Fragaria vesca HOM05D005910 ORTHO05D007088 1.7e-52 209.9 190 63.2
FAN05G0623 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.7e-52 209.9 193 63.7
FAN14G5103 Fragaria x ananassa HOM05D005910 ORTHO05D007088 1.7e-52 209.9 193 63.7
Lj1g0011929 Lotus japonicus HOM05D005910 ORTHO05D007088 1.7e-52 209.9 188 64.4
MD12G1054500 Malus domestica HOM05D005910 ORTHO05D007088 1.7e-52 209.9 194 63.4
PGR142G2565 Punica granatum HOM05D005910 ORTHO05D007088 1.7e-52 209.9 192 63.5
Solyc10g079000.1 Solanum lycopersicum HOM05D005910 ORTHO05D007088 2.3e-52 209.5 192 62.5
Sopen10g029620 Solanum pennellii HOM05D005910 ORTHO05D007088 2.3e-52 209.5 192 62.5
PGSC0003DMG400011451 Solanum tuberosum HOM05D005910 ORTHO05D007088 2.3e-52 209.5 192 62.5
CARHR086590 Cardamine hirsuta HOM05D005910 ORTHO05D007088 2.9e-52 209.1 199 61.8
Lalb_Chr14g0364291 Lupinus albus HOM05D005910 ORTHO05D007088 2.9e-52 209.1 188 63.8
SGA_v2.0_scaffold69G23042 Striga asiatica HOM05D005910 ORTHO05D007088 3.8e-52 208.8 199 61.3
BcaB04g21099 Brassica carinata HOM05D005910 ORTHO05D007088 5.0e-52 208.4 200 61.5
CAN.G960.19 Capsicum annuum HOM05D005910 ORTHO05D007088 6.6e-52 208.0 192 62.5
Sp6g36210 Schrenkiella parvula HOM05D005910 ORTHO05D007088 8.6e-52 207.6 201 62.7
Atru.chr8.1156 Acer truncatum HOM05D005910 ORTHO05D007088 1.1e-51 207.2 198 63.6
Carub.0003s1137 Capsella rubella HOM05D005910 ORTHO05D007088 1.1e-51 207.2 199 62.3
CiPaw.09G028200 Carya illinoinensis HOM05D005910 ORTHO05D007088 1.1e-51 207.2 191 64.4
TWI77G0716 Tripterygium wilfordii HOM05D005910 ORTHO05D007088 1.5e-51 206.8 195 62.1
GSVIVG01033465001 Vitis vinifera HOM05D005910 ORTHO05D007088 1.9e-51 206.5 194 61.3
Aa31LG3G5420 Aethionema arabicum HOM05D005910 ORTHO05D007088 2.5e-51 206.1 199 61.8
CANSAT64G0849 Cannabis sativa HOM05D005910 ORTHO05D007088 2.5e-51 206.1 193 62.7
THA.LOC104799285 Tarenaya hassleriana HOM05D005910 ORTHO05D007088 2.5e-51 206.1 196 61.7
CiPaw.10G025100 Carya illinoinensis HOM05D005910 ORTHO05D007088 4.3e-51 205.3 191 64.4
RcHm_v2.0_Chr3g0479191 Rosa chinensis HOM05D005910 ORTHO05D007088 5.6e-51 204.9 193 63.7
CsaV3_3G038630 Cucumis sativus L. HOM05D005910 ORTHO05D007088 9.5e-51 204.1 180 65.6
Migut.J01866 Erythranthe guttata HOM05D005910 ORTHO05D007088 2.1e-50 203.0 199 61.3
Nitab4.5_0009361g0020 Nicotiana tabacum HOM05D005910 ORTHO05D007088 2.8e-50 202.6 193 60.1
Peaxi162Scf00463g00044 Petunia axillaris HOM05D005910 ORTHO05D007088 3.6e-50 202.2 195 60.5
Sed0016712 Sechium edule HOM05D005910 ORTHO05D007088 3.6e-50 202.2 192 60.9
Prupe.7G082200 Prunus persica HOM05D005910 ORTHO05D007088 1.0e-49 200.7 197 62.9
Nitab4.5_0000009g0230 Nicotiana tabacum HOM05D005910 ORTHO05D007088 3.0e-49 199.1 193 59.6
Aqoxy7G00427 Aquilegia oxysepala HOM05D005910 ORTHO05D007088 1.2e-48 197.2 190 60.5
MSTRG.19925 Avicennia marina HOM05D005910 ORTHO05D007088 1.5e-48 196.8 191 61.3
QL07p024560 Quercus lobata HOM05D005910 ORTHO05D007088 1.5e-48 196.8 199 60.8
TAR623G1561 Trochodendron aralioides HOM05D005910 ORTHO05D007088 2.6e-48 196.1 194 60.3
PSO478G2464 Papaver somniferum HOM05D005910 ORTHO05D007088 4.4e-48 195.3 194 58.2
Lsat_1_v5_gn_6_36581 Lactuca sativa HOM05D005910 ORTHO05D007088 5.7e-48 194.9 196 59.7
Manes.08G042400 Manihot esculenta HOM05D005910 ORTHO05D007088 7.5e-48 194.5 192 60.9
TAR369G0766 Trochodendron aralioides HOM05D005910 ORTHO05D007088 1.7e-47 193.4 194 59.3
Sc13g0002410 Simmondsia chinensis HOM05D005910 ORTHO05D007088 4.9e-47 191.8 201 57.2
unitig_26.g10040 Utricularia gibba HOM05D005910 ORTHO05D007088 4.9e-47 191.8 200 57.5
AUR62012008 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.3e-47 191.0 201 56.2
AUR62015329 Chenopodium quinoa HOM05D005910 ORTHO05D007088 8.3e-47 191.0 198 55.1
Cfa020141 Carpinus fangiana HOM05D005910 ORTHO05D007088 7.0e-46 188.0 195 60.0
vmacro22120 Vaccinium macrocarpon HOM05D005910 ORTHO05D007088 7.0e-46 188.0 173 62.4
Haze_20022 Corylus avellana HOM05D005910 ORTHO05D007088 1.2e-45 187.2 191 60.7
Haze_20025 Corylus avellana HOM05D005910 ORTHO05D007088 1.2e-45 187.2 191 60.7
ECA238G3575 Erigeron canadensis HOM05D005910 ORTHO05D007088 1.2e-45 187.2 197 56.3
EL10Ac3g06882 Beta vulgaris HOM05D005910 ORTHO05D007088 2.7e-45 186.0 201 55.7
Sed0026900 Sechium edule HOM05D005910 ORTHO05D007088 1.0e-44 184.1 202 57.4
HPP92_021275 Vanilla planifolia HOM05D005910 ORTHO05D007088 1.0e-44 184.1 196 52.6
Potri.016G060300 Populus trichocarpa HOM05D005910 ORTHO05D007088 1.3e-44 183.7 193 59.1
HanXRQChr03g0075461 Helianthus annuus HOM05D005910 ORTHO05D007088 2.5e-43 179.5 193 56.5
HanXRQChr14g0438251 Helianthus annuus HOM05D005910 ORTHO05D007088 3.3e-43 179.1 193 56.5
ATR0598G129 Amborella trichopoda HOM05D005910 ORTHO05D007088 5.6e-43 178.3 183 54.1
SHI31753 Sapria himalayana HOM05D005910 ORTHO05D007088 7.3e-43 177.9 191 57.1
Pp3c21_11350 Physcomitrium patens HOM05D005910 ORTHO05D007088 1.2e-42 177.2 191 56.0
Mapoly0107s0023 Marchantia polymorpha HOM05D005910 ORTHO05D007088 2.8e-42 176.0 183 53.6
AagrBONN_evm.TU.Sc2ySwM_117.1513 Anthoceros agrestis HOM05D005910 ORTHO05D007088 3.6e-42 175.6 189 51.3
CSS0042896 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 6.2e-42 174.9 193 57.0
Zm00001eb055560 Zea mays HOM05D005910 ORTHO05D007088 1.1e-38 164.1 200 49.0
Zm00001eb215980 Zea mays HOM05D005910 ORTHO05D007088 2.7e-37 159.5 202 47.5
CBR_g49549 Chara braunii HOM05D005910 ORTHO05D007088 3.5e-37 159.1 182 50.5
SMO367G0437 Selaginella moellendorffii HOM05D005910 ORTHO05D007088 3.5e-37 159.1 174 51.1
Os03g0721400 Oryza sativa ssp. japonica HOM05D005910 ORTHO05D007088 3.0e-36 156.0 210 45.2
Lj1P1133T16 Lonicera japonica HOM05D005910 ORTHO05D007088 6.6e-36 154.8 138 63.8
Dinv24042 Davidia involucrata HOM05D005910 ORTHO05D007088 2.3e-33 146.4 194 51.5
CSS0024230 Camellia sinensis var. sinensis HOM05D005910 ORTHO05D007088 9.8e-32 141.0 197 50.3
Ciclev10013918m.g Citrus clementina HOM05D005910 ORTHO05D007088 9.8e-32 141.0 134 61.9
Sabra16G0063200 Salix brachista HOM05D005910 ORTHO05D007088 2.4e-30 136.3 139 60.4
SEGI_08450 Sequoiadendron giganteum HOM05D005910 ORTHO05D007088 5.1e-28 128.6 166 48.8
MD11G1118600 Malus domestica HOM05D005910 ORTHO05D007088 4.3e-27 125.6 126 58.7
DCAR_009688 Daucus carota HOM05D005910 ORTHO05D007088 1.6e-26 123.6 86 69.8
MD14G1053500 Malus domestica HOM05D005910 ORTHO05D007088 2.0e-24 116.7 122 59.0
Actinidia38594 Actinidia chinensis HOM05D005910 ORTHO05D007088 3.2e-22 109.4 129 57.4
Haze_26182 Corylus avellana HOM05D005910 ORTHO05D007088 1.2e-18 97.4 171 35.7
MD03G1239200 Malus domestica HOM05D005910 ORTHO05D007088 1.1e-14 84.3 147 47.6
Sabra08G0162900 Salix brachista HOM05D003359 ORTHO05D007088 7.1e-14 81.6 45 82.2
MD00G1019800 Malus domestica HOM05D005910 ORTHO05D007088 3.0e-12 76.3 104 49.0
QL03p020127 Quercus lobata HOM05D005910 ORTHO05D007088 1.5e-11 73.9 118 49.2
QL07p006238 Quercus lobata HOM05D005910 ORTHO05D007088 1.6e-10 70.5 110 44.5
PRCOL_00005630 Prasinoderma coloniale HOM05D005910 ORTHO05D007088 1.1e-09 67.8 161 25.5
Cre03.g182900 Chlamydomonas reinhardtii HOM05D005910 ORTHO05D007088 3.4e-08 62.8 177 27.1
CDE06G1328 Ceratophyllum demersum HOM05D005910 ORTHO05D007088 7.6e-08 61.6 88 46.6
HanXRQChr13g0398341 Helianthus annuus HOM05D005910 ORTHO05D007088 1.3e-07 60.8 55 56.4


User provided reference genes

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