Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0023279 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 7.5e-118 427.2 212 100.0
CSS0031173 Camellia sinensis var. sinensis HOM05D008363 ORTHO05D010508 7.5e-118 427.2 212 100.0
Actinidia14803 Actinidia chinensis HOM05D008363 ORTHO05D010508 2.5e-73 279.3 241 62.7
Hma1.2p1_0303F.1_g119070 Hydrangea macrophylla HOM05D008363 ORTHO05D010508 4.8e-64 248.4 219 60.3
Dinv28961 Davidia involucrata HOM05D008363 ORTHO05D010508 1.3e-61 240.4 213 58.7
TAR636G2722 Trochodendron aralioides HOM05D008363 ORTHO05D010508 2.3e-50 203.0 235 47.7
Prupe.5G035100 Prunus persica HOM05D008363 ORTHO05D010508 1.5e-49 200.3 230 47.4
Cpa.g.sc227.8 Carica papaya HOM05D008363 ORTHO05D010508 4.8e-48 195.3 217 49.3
Thecc.03G227000 Theobroma cacao HOM05D008363 ORTHO05D010508 2.9e-45 186.0 217 47.0
Duzib084G1116 Durio zibethinus HOM05D008363 ORTHO05D010508 3.8e-45 185.7 222 46.8
Oeu006320.1 Olea europaea HOM05D008363 ORTHO05D010508 5.0e-45 185.3 221 44.3
Duzib205G1194 Durio zibethinus HOM05D008363 ORTHO05D010508 1.9e-44 183.3 203 48.8
RcHm_v2.0_Chr7g0209801 Rosa chinensis HOM05D008363 ORTHO05D010508 3.2e-44 182.6 215 45.1
FAN13G1991 Fragaria x ananassa HOM05D008363 ORTHO05D010508 1.2e-43 180.6 220 44.1
TWI60G0018 Tripterygium wilfordii HOM05D008363 ORTHO05D010508 2.1e-43 179.9 204 47.5
FAN18G1001 Fragaria x ananassa HOM05D008363 ORTHO05D010508 2.7e-43 179.5 204 46.1
TAR633G2165 Trochodendron aralioides HOM05D008363 ORTHO05D010508 3.6e-43 179.1 196 50.5
Aqoxy5G00023 Aquilegia oxysepala HOM05D008363 ORTHO05D010508 4.7e-43 178.7 202 47.5
FAN08G0799 Fragaria x ananassa HOM05D008363 ORTHO05D010508 4.7e-43 178.7 220 43.6
FvH4_5g22141 Fragaria vesca HOM05D008363 ORTHO05D010508 6.1e-43 178.3 204 45.6
FAN04G2847 Fragaria x ananassa HOM05D008363 ORTHO05D010508 2.3e-42 176.4 220 43.2
Cc08_g02830 Coffea canephora HOM05D008363 ORTHO05D010508 8.8e-42 174.5 219 45.2
Migut.A01011 Erythranthe guttata HOM05D008363 ORTHO05D010508 1.1e-41 174.1 228 43.4
Gohir.A03G000300 Gossypium hirsutum HOM05D008363 ORTHO05D010508 2.6e-41 172.9 217 45.6
Gohir.D03G171900 Gossypium hirsutum HOM05D008363 ORTHO05D010508 3.3e-41 172.6 220 46.4
DCAR_024961 Daucus carota HOM05D008363 ORTHO05D010508 9.7e-41 171.0 219 45.2
Manes.05G195161 Manihot esculenta HOM05D008363 ORTHO05D010508 1.4e-39 167.2 226 39.8
COL.COLO4_17025 Corchorus olitorius HOM05D008363 ORTHO05D010508 5.3e-39 165.2 203 45.8
PGR031G1477 Punica granatum HOM05D008363 ORTHO05D010508 3.8e-37 159.1 223 42.6
ECA240G1797 Erigeron canadensis HOM05D002571 ORTHO05D002868 1.4e-34 150.6 180 42.8
Psat2g136320 Pisum sativum HOM05D008363 ORTHO05D010508 1.8e-34 150.2 217 41.0
Manes.15G182300 Manihot esculenta HOM05D008363 ORTHO05D010508 4.0e-34 149.1 214 40.7
Ciclev10013884m.g Citrus clementina HOM05D008363 ORTHO05D010508 5.2e-34 148.7 185 44.9
Lsat_1_v5_gn_6_79301 Lactuca sativa HOM05D008363 ORTHO05D010508 1.3e-32 144.1 187 42.2
Ca_06083_v3 Cicer arietinum L. HOM05D008363 ORTHO05D010508 1.7e-32 143.7 192 42.7
MD16G1273800 Malus domestica HOM05D008363 ORTHO05D010508 3.1e-31 139.4 115 59.1
MD06G1034800 Malus domestica HOM05D008363 ORTHO05D010508 7.0e-31 138.3 115 56.5
Glyma.09G204700 Glycine max HOM05D008363 ORTHO05D010508 2.7e-30 136.3 207 39.6
CANSAT21G1194 Cannabis sativa HOM05D008363 ORTHO05D010508 5.9e-30 135.2 169 42.6
PGR042G3791 Punica granatum HOM05D008363 ORTHO05D010508 7.7e-30 134.8 164 47.6
Solyc08g076887.1 Solanum lycopersicum HOM05D008363 ORTHO05D010508 1.3e-29 134.0 114 55.3
Potri.001G141900 Populus trichocarpa HOM05D008363 ORTHO05D010508 1.7e-29 133.7 196 39.8
Dinv25219 Davidia involucrata HOM05D008363 ORTHO05D010508 2.9e-29 132.9 209 42.6
Potri.014G146500 Populus trichocarpa HOM05D008363 ORTHO05D010508 5.0e-29 132.1 230 36.5
DCAR_005636 Daucus carota HOM05D008363 ORTHO05D010508 1.8e-26 123.6 215 35.8
CsaV3_3G001670 Cucumis sativus L. HOM05D008363 ORTHO05D010508 3.0e-26 122.9 183 38.3
Haze_08219 Corylus avellana HOM05D008363 ORTHO05D010508 2.6e-25 119.8 182 39.6
Cfa012447 Carpinus fangiana HOM05D000816 ORTHO05D010508 4.4e-25 119.0 183 39.3
MBI18_g13989_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 3.8e-21 105.9 157 36.3
Duzib084G0653 Durio zibethinus HOM05D008363 ORTHO05D010508 2.3e-18 96.7 193 36.8
DCAR_008265 Daucus carota HOM05D008363 ORTHO05D010508 3.4e-17 92.8 141 36.9
Ciclev10023626m.g Citrus clementina HOM05D008363 ORTHO05D010508 7.7e-14 81.6 209 31.1
MELO3C013848.2 Cucumis melo HOM05D008363 ORTHO05D010508 4.9e-08 62.4 53 54.7
Glyma.01G018200 Glycine max HOM05D008363 ORTHO05D010508 4.9e-08 62.4 69 50.7


User provided reference genes

Program Settings