Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031169 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 8.5e-103 377.1 203 100.0
Rhsim08G0034500 Rhododendron simsii HOM05D005734 ORTHO05D006990 2.3e-76 289.3 196 81.6
Actinidia31004 Actinidia chinensis HOM05D005734 ORTHO05D006990 6.4e-74 281.2 195 80.5
Dinv33615 Davidia involucrata HOM05D005734 ORTHO05D006990 3.9e-71 271.9 190 78.4
QL06p033653 Quercus lobata HOM05D005734 ORTHO05D006990 5.6e-70 268.1 198 74.7
TAR376G0390 Trochodendron aralioides HOM05D005734 ORTHO05D006990 4.7e-69 265.0 205 71.2
Cc07_g10570 Coffea canephora HOM05D005734 ORTHO05D006990 1.4e-68 263.5 194 74.2
SalBow3G4629 Salvia bowleyana HOM05D005734 ORTHO05D006990 8.9e-68 260.8 198 71.7
Eucgr.K02152 Eucalyptus grandis HOM05D005734 ORTHO05D006990 1.5e-67 260.0 194 72.7
Solyc02g084220.3 Solanum lycopersicum HOM05D005734 ORTHO05D006990 1.5e-67 260.0 196 71.9
Lj2C466G2 Lonicera japonica HOM05D005734 ORTHO05D006990 5.8e-67 258.1 198 73.7
TAR628G0339 Trochodendron aralioides HOM05D005734 ORTHO05D006990 5.8e-67 258.1 197 70.6
Sopen02g028960 Solanum pennellii HOM05D005734 ORTHO05D006990 9.9e-67 257.3 196 71.4
Gorai.003G010600 Gossypium raimondii HOM05D005734 ORTHO05D006990 2.2e-66 256.1 196 71.4
Manes.02G102700 Manihot esculenta HOM05D005734 ORTHO05D006990 2.2e-66 256.1 186 76.9
VMungo1215G0268 Vigna mungo HOM05D005734 ORTHO05D006990 2.9e-66 255.8 198 70.7
COL.COLO4_21933 Corchorus olitorius HOM05D005734 ORTHO05D006990 3.7e-66 255.4 185 75.1
Glyma.11G075600 Glycine max HOM05D005734 ORTHO05D006990 4.9e-66 255.0 193 72.5
Gohir.D03G010200 Gossypium hirsutum HOM05D005734 ORTHO05D006990 6.4e-66 254.6 196 70.9
Peaxi162Scf00083g00086 Petunia axillaris HOM05D005734 ORTHO05D006990 8.4e-66 254.2 184 73.9
CiPaw.08G133400 Carya illinoinensis HOM05D005734 ORTHO05D006990 1.1e-65 253.8 210 69.5
Nitab4.5_0004254g0030 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.9e-65 253.1 210 68.1
Thecc.01G021200 Theobroma cacao HOM05D005734 ORTHO05D006990 1.9e-65 253.1 185 74.6
Lalb_Chr16g0391171 Lupinus albus HOM05D005734 ORTHO05D006990 2.4e-65 252.7 184 72.3
MD15G1247200 Malus domestica HOM05D005734 ORTHO05D006990 2.4e-65 252.7 194 70.6
Phvul.002G110400 Phaseolus vulgaris HOM05D005734 ORTHO05D006990 2.4e-65 252.7 193 71.0
MSTRG.2698 Avicennia marina HOM05D005734 ORTHO05D006990 3.2e-65 252.3 195 71.3
PGSC0003DMG400003554 Solanum tuberosum HOM05D005734 ORTHO05D006990 4.1e-65 251.9 221 64.3
Nn6g32291 Nelumbo nucifera HOM05D005734 ORTHO05D006990 7.1e-65 251.1 184 70.7
Gohir.A02G169800 Gossypium hirsutum HOM05D005734 ORTHO05D006990 1.6e-64 250.0 185 72.4
Nitab4.5_0005721g0110 Nicotiana tabacum HOM05D005734 ORTHO05D006990 1.6e-64 250.0 204 69.1
TWI09G0878 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 1.6e-64 250.0 193 72.5
Sabra07G0011400 Salix brachista HOM05D005734 ORTHO05D006990 2.1e-64 249.6 195 70.8
Lj2g0025294 Lotus japonicus HOM05D005734 ORTHO05D006990 2.7e-64 249.2 194 71.1
TWI73G0895 Tripterygium wilfordii HOM05D005734 ORTHO05D006990 4.6e-64 248.4 197 70.6
GSVIVG01018804001 Vitis vinifera HOM05D005734 ORTHO05D006990 4.6e-64 248.4 191 71.2
Migut.H01144 Erythranthe guttata HOM05D005734 ORTHO05D006990 6.0e-64 248.1 198 67.7
Glyma.01G167600 Glycine max HOM05D005734 ORTHO05D006990 7.8e-64 247.7 193 70.5
EL10Ac3g07303 Beta vulgaris HOM05D005734 ORTHO05D006990 1.0e-63 247.3 194 70.6
Ca_24908_v3 Cicer arietinum L. HOM05D005734 ORTHO05D006990 3.0e-63 245.7 193 69.4
PSO210G7806 Papaver somniferum HOM05D005734 ORTHO05D006990 3.9e-63 245.4 185 71.4
Ciclev10026469m.g Citrus clementina HOM05D005734 ORTHO05D006990 8.6e-63 244.2 196 70.4
MD02G1134200 Malus domestica HOM05D005734 ORTHO05D006990 8.6e-63 244.2 202 67.3
Ah.03g141620 Amaranthus hybridus HOM05D005734 ORTHO05D006990 1.9e-62 243.0 184 72.3
Potri.005G116300 Populus trichocarpa HOM05D005734 ORTHO05D006990 1.9e-62 243.0 194 71.6
Duzib147G0754 Durio zibethinus HOM05D005734 ORTHO05D006990 2.5e-62 242.7 182 73.1
Medtr5g021750 Medicago truncatula HOM05D005734 ORTHO05D006990 2.5e-62 242.7 193 67.9
DCAR_017347 Daucus carota HOM05D005734 ORTHO05D006990 3.3e-62 242.3 193 69.9
RcHm_v2.0_Chr2g0099641 Rosa chinensis HOM05D005734 ORTHO05D006990 3.6e-61 238.8 194 69.1
TPR.G2344 Trifolium pratense HOM05D005734 ORTHO05D006990 3.6e-61 238.8 193 66.8
Sed0005630 Sechium edule HOM05D005734 ORTHO05D006990 8.1e-61 237.7 195 68.7
ClCG07G008420 Citrullus lanatus HOM05D005734 ORTHO05D006990 1.1e-60 237.3 186 70.4
CsaV3_4G005730 Cucumis sativus L. HOM05D005734 ORTHO05D006990 1.4e-60 236.9 186 70.4
Sabra05G0095300 Salix brachista HOM05D005734 ORTHO05D006990 1.8e-60 236.5 185 70.8
Psat2g155360 Pisum sativum HOM05D005734 ORTHO05D006990 2.4e-60 236.1 197 65.0
Hund14038 Selenicereus undatus HOM05D005734 ORTHO05D006990 3.1e-60 235.7 225 60.4
arahy.Tifrunner.gnm1.ann1.GC558H Arachis hypogaea HOM05D005734 ORTHO05D006990 5.2e-60 235.0 198 65.2
FvH4_1g12000 Fragaria vesca HOM05D005734 ORTHO05D006990 5.2e-60 235.0 194 66.5
THA.LOC104819182 Tarenaya hassleriana HOM05D005734 ORTHO05D006990 5.2e-60 235.0 186 68.3
A07p17570 Brassica napus HOM05D005734 ORTHO05D006990 6.8e-60 234.6 197 62.9
FAN19G0086 Fragaria x ananassa HOM05D005734 ORTHO05D006990 6.8e-60 234.6 194 66.5
Carub.0008s2820 Capsella rubella HOM05D005734 ORTHO05D006990 8.9e-60 234.2 195 63.6
Thhalv10004735m.g Eutrema salsugineum HOM05D005734 ORTHO05D006990 8.9e-60 234.2 191 64.9
Sp2g30330 Schrenkiella parvula HOM05D005734 ORTHO05D006990 5.8e-59 231.5 196 62.8
Lsat_1_v5_gn_3_73980 Lactuca sativa HOM05D005734 ORTHO05D006990 7.6e-59 231.1 193 66.3
AL8G45230 Arabidopsis lyrata HOM05D005734 ORTHO05D006990 2.2e-58 229.6 195 63.1
AT5G66290 Arabidopsis thaliana HOM05D005734 ORTHO05D006990 2.9e-58 229.2 186 65.6
HanXRQChr16g0531031 Helianthus annuus HOM05D005734 ORTHO05D006990 6.4e-58 228.0 211 62.6
BcaB02g10036 Brassica carinata HOM05D005734 ORTHO05D006990 8.4e-58 227.6 198 60.1
Aqoxy4G02678 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 1.1e-57 227.3 194 67.0
ECA246G4348 Erigeron canadensis HOM05D000013 ORTHO05D000011 1.4e-57 226.9 197 64.5
BcaC06g34694 Brassica carinata HOM05D005734 ORTHO05D006990 2.4e-57 226.1 195 61.0
C07p25530 Brassica napus HOM05D005734 ORTHO05D006990 2.4e-57 226.1 195 61.0
BolC7t43073H Brassica oleracea HOM05D005734 ORTHO05D006990 2.4e-57 226.1 195 61.0
Aqoxy4G02673 Aquilegia oxysepala HOM05D005734 ORTHO05D006990 5.4e-57 224.9 231 59.7
MBI05_g26512_MAGBIO Magnolia biondii HOM05D005734 ORTHO05D006990 5.4e-57 224.9 204 64.2
Cpa.g.sc6.229 Carica papaya HOM05D005734 ORTHO05D006990 9.3e-57 224.2 185 67.6
CSS0012385 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 1.2e-56 223.8 152 82.2
unitig_699.g19712 Utricularia gibba HOM05D005734 ORTHO05D006990 1.6e-56 223.4 197 62.9
CSS0021905 Camellia sinensis var. sinensis HOM05D005734 ORTHO05D006990 3.5e-56 222.2 152 81.6
vmacro18422 Vaccinium macrocarpon HOM05D005734 ORTHO05D006990 3.5e-56 222.2 240 58.3
ATR0147G004 Amborella trichopoda HOM05D005734 ORTHO05D006990 7.8e-56 221.1 182 64.8
HPP92_018404 Vanilla planifolia HOM05D005734 ORTHO05D006990 1.3e-55 220.3 186 64.5
Aa31LG1G14770 Aethionema arabicum HOM05D005734 ORTHO05D006990 3.0e-55 219.2 196 59.7
Os03g0727100 Oryza sativa ssp. japonica HOM05D005734 ORTHO05D006990 1.5e-54 216.9 205 61.0
BcaC04g23124 Brassica carinata HOM05D005734 ORTHO05D006990 2.5e-54 216.1 197 58.4
BcaNung05273 Brassica carinata HOM05D005734 ORTHO05D006990 2.5e-54 216.1 197 58.4
BcaC04g23120 Brassica carinata HOM05D005734 ORTHO05D006990 3.3e-54 215.7 189 60.8
Gohir.A12G060300 Gossypium hirsutum HOM05D005734 ORTHO05D006990 7.3e-54 214.5 198 62.1
C09p11890 Brassica napus HOM05D005734 ORTHO05D006990 9.6e-54 214.2 186 59.1
BolC9t54077H Brassica oleracea HOM05D005734 ORTHO05D006990 9.6e-54 214.2 186 59.1
BcaNung04509 Brassica carinata HOM05D005734 ORTHO05D006990 1.3e-53 213.8 190 61.1
Nn5g29268 Nelumbo nucifera HOM05D005734 ORTHO05D006990 2.8e-53 212.6 186 63.4
HanXRQChr15g0482851 Helianthus annuus HOM05D005734 ORTHO05D006990 6.2e-53 211.5 199 62.3
Prupe.7G166600 Prunus persica HOM05D005734 ORTHO05D006990 1.4e-52 210.3 193 63.7
Zm00001eb055930 Zea mays HOM05D005734 ORTHO05D006990 3.1e-52 209.1 206 58.7
Sc16g0002040 Simmondsia chinensis HOM05D005734 ORTHO05D006990 6.4e-50 201.4 155 72.3
RcHm_v2.0_Chr1g0353231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.9e-49 199.9 162 67.3
RcHm_v2.0_Chr5g0080231 Rosa chinensis HOM05D005734 ORTHO05D006990 1.6e-48 196.8 150 70.7
CARHR281420 Cardamine hirsuta HOM05D005734 ORTHO05D006990 2.7e-48 196.1 143 69.9
FAN26G0019 Fragaria x ananassa HOM05D005734 ORTHO05D006990 4.6e-48 195.3 194 58.8
RcHm_v2.0_Chr0c39g0503221 Rosa chinensis HOM05D005734 ORTHO05D006990 7.9e-48 194.5 140 72.9
A09p10030 Brassica napus HOM05D005734 ORTHO05D006990 2.3e-47 193.0 196 51.0
Lsat_1_v5_gn_4_152781 Lactuca sativa HOM05D005734 ORTHO05D006990 1.3e-45 187.2 180 56.1
Cfa006957 Carpinus fangiana HOM05D005734 ORTHO05D006990 2.8e-45 186.0 128 77.3
QL06p033647 Quercus lobata HOM05D005734 ORTHO05D006990 3.6e-45 185.7 128 76.6
SGA_v2.0_scaffold137G35098 Striga asiatica HOM05D005734 ORTHO05D006990 2.0e-43 179.9 114 79.8
AUR62018084 Chenopodium quinoa HOM05D005734 ORTHO05D006990 1.3e-42 177.2 126 74.6
arahy.Tifrunner.gnm1.ann1.DFQ3ES Arachis hypogaea HOM05D005734 ORTHO05D006990 6.4e-42 174.9 127 70.9
Atru.chr3.782 Acer truncatum HOM05D005734 ORTHO05D006990 4.2e-41 172.2 156 58.3
Potri.007G014000 Populus trichocarpa HOM05D005734 ORTHO05D006990 6.0e-40 168.3 137 70.1
ATR0876G001 Amborella trichopoda HOM05D005734 ORTHO05D006990 4.3e-38 162.2 112 67.9
FAN23G1819 Fragaria x ananassa HOM05D005734 ORTHO05D006990 9.6e-38 161.0 204 52.5
MELO3C016376.2 Cucumis melo HOM05D005734 ORTHO05D006990 3.7e-37 159.1 139 66.9
PSO170G3799 Papaver somniferum HOM05D005734 ORTHO05D006990 2.6e-35 152.9 123 70.7
CDE11G0627 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.5e-30 136.3 109 66.1
Pp3c14_25740 Physcomitrium patens HOM05D005734 ORTHO05D006990 3.1e-28 129.4 202 38.6
Sc16g0006390 Simmondsia chinensis HOM05D005734 ORTHO05D006990 2.0e-27 126.7 96 71.9
Gorai.008G063500 Gossypium raimondii HOM05D005734 ORTHO05D006990 2.6e-27 126.3 113 62.8
Sc18g0002570 Simmondsia chinensis HOM05D005734 ORTHO05D006990 4.5e-27 125.6 96 70.8
CDE05G1720 Ceratophyllum demersum HOM05D005734 ORTHO05D006990 2.2e-26 123.2 149 52.3
Sc09g0006730 Simmondsia chinensis HOM05D005734 ORTHO05D006990 5.0e-26 122.1 96 69.8
Pp3c1_42750 Physcomitrium patens HOM05D005734 ORTHO05D006990 1.9e-25 120.2 191 39.3
Mapoly0166s0009 Marchantia polymorpha HOM05D005734 ORTHO05D006990 9.3e-25 117.9 158 41.8
FAN28G1963 Fragaria x ananassa HOM05D005734 ORTHO05D006990 3.0e-23 112.8 100 64.0
Lj2A474G36 Lonicera japonica HOM05D005734 ORTHO05D006990 3.9e-23 112.5 151 47.7
BraA09t36646Z Brassica rapa HOM05D005734 ORTHO05D006990 3.3e-22 109.4 104 54.8
Lsat_1_v5_gn_4_38760 Lactuca sativa HOM05D005734 ORTHO05D006990 5.7e-22 108.6 122 50.0
Haze_03794 Corylus avellana HOM05D005734 ORTHO05D006990 2.8e-21 106.3 68 80.9
Medtr5g021780 Medicago truncatula HOM05D005734 ORTHO05D006990 1.2e-19 100.9 83 63.9
AagrBONN_evm.TU.Sc2ySwM_117.481 Anthoceros agrestis HOM05D005734 ORTHO05D006990 7.2e-17 91.7 140 37.1
RcHm_v2.0_Chr2g0126361 Rosa chinensis HOM05D005734 ORTHO05D006990 2.7e-16 89.7 56 75.0
Gohir.D12G060400 Gossypium hirsutum HOM05D005734 ORTHO05D006990 4.6e-16 89.0 78 65.4
SMO228G0004 Selaginella moellendorffii HOM05D005734 ORTHO05D006990 6.7e-15 85.1 104 38.5
Lj2C474G2 Lonicera japonica HOM05D005734 ORTHO05D006990 1.7e-13 80.5 62 71.0
Eucgr.L03507 Eucalyptus grandis HOM05D005734 ORTHO05D006990 4.2e-09 65.9 83 49.4


User provided reference genes

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