Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0014017 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 9.6e-77 290.0 142 100.0
CSS0031140 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 9.6e-77 290.0 142 100.0
Dinv07945 Davidia involucrata HOM05D004542 ORTHO05D005380 4.1e-51 204.9 140 72.1
Actinidia31969 Actinidia chinensis HOM05D004542 ORTHO05D005380 3.4e-50 201.8 143 67.8
Actinidia17747 Actinidia chinensis HOM05D004542 ORTHO05D005380 5.9e-50 201.1 143 69.2
Prupe.1G009500 Prunus persica HOM05D004542 ORTHO05D005380 2.0e-45 186.0 142 66.2
Duzib248G0510 Durio zibethinus HOM05D004542 ORTHO05D005380 1.3e-44 183.3 144 67.4
Thecc.02G341300 Theobroma cacao HOM05D004542 ORTHO05D005380 1.7e-44 183.0 143 65.7
Manes.01G033600 Manihot esculenta HOM05D004542 ORTHO05D005380 4.1e-43 178.3 139 64.0
Potri.010G165100 Populus trichocarpa HOM05D004542 ORTHO05D005380 5.3e-43 177.9 138 62.3
Cpa.g.sc69.70 Carica papaya HOM05D004542 ORTHO05D005380 2.6e-42 175.6 137 62.8
Duzib251G0803 Durio zibethinus HOM05D004542 ORTHO05D005380 2.6e-42 175.6 143 65.7
RcHm_v2.0_Chr4g0415001 Rosa chinensis HOM05D004542 ORTHO05D005380 5.9e-42 174.5 137 62.8
FvH4_4g13880 Fragaria vesca HOM05D004542 ORTHO05D005380 7.7e-42 174.1 136 62.5
FAN12G3669 Fragaria x ananassa HOM05D004542 ORTHO05D005380 7.7e-42 174.1 136 62.5
Gohir.A07G047800 Gossypium hirsutum HOM05D004542 ORTHO05D005380 1.3e-41 173.3 146 64.4
Potri.008G090100 Populus trichocarpa HOM05D004542 ORTHO05D005380 2.2e-41 172.6 138 63.0
CANSAT21G2357 Cannabis sativa HOM05D004542 ORTHO05D005380 2.9e-41 172.2 142 63.4
FAN07G0300 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.9e-41 172.2 136 61.8
Gohir.D07G052100 Gossypium hirsutum HOM05D004542 ORTHO05D005380 6.5e-41 171.0 146 65.1
Gorai.001G055100 Gossypium raimondii HOM05D004542 ORTHO05D005380 1.1e-40 170.2 148 64.2
Cfa004898 Carpinus fangiana HOM05D004542 ORTHO05D005380 3.2e-40 168.7 137 61.3
Ciclev10033055m.g Citrus clementina HOM05D004542 ORTHO05D005380 3.2e-40 168.7 132 64.4
CiPaw.06G087700 Carya illinoinensis HOM05D004542 ORTHO05D005380 1.6e-39 166.4 126 62.7
MD04G1010200 Malus domestica HOM05D004542 ORTHO05D005380 2.1e-39 166.0 143 62.9
FAN22G1961 Fragaria x ananassa HOM05D004542 ORTHO05D005380 2.7e-39 165.6 136 60.3
THA.LOC104808670 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 3.6e-39 165.2 138 60.1
Oeu001710.1 Olea europaea HOM05D004542 ORTHO05D005380 4.7e-39 164.9 140 61.4
QL05p050003 Quercus lobata HOM05D004542 ORTHO05D005380 1.0e-38 163.7 120 69.2
Atru.chr11.1738 Acer truncatum HOM05D004542 ORTHO05D005380 1.4e-38 163.3 135 63.7
Peaxi162Scf00222g00329 Petunia axillaris HOM05D004542 ORTHO05D005380 1.8e-38 162.9 141 58.9
TWI73G0467 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 1.8e-38 162.9 137 59.9
Cpa.g.sc57.38 Carica papaya HOM05D004542 ORTHO05D005380 3.0e-38 162.2 119 64.7
TAR622G0172 Trochodendron aralioides HOM05D004542 ORTHO05D005380 3.0e-38 162.2 140 60.7
Aa31LG7G8390 Aethionema arabicum HOM05D004542 ORTHO05D005380 3.9e-38 161.8 136 59.6
RcHm_v2.0_Chr4g0414951 Rosa chinensis HOM05D004542 ORTHO05D005380 3.9e-38 161.8 138 59.4
Cc00_g16630 Coffea canephora HOM05D004542 ORTHO05D005380 6.7e-38 161.0 139 59.7
Peaxi162Scf00023g02531 Petunia axillaris HOM05D004542 ORTHO05D005380 8.8e-38 160.6 143 59.4
MSTRG.2336 Avicennia marina HOM05D004542 ORTHO05D005380 1.1e-37 160.2 139 59.7
Migut.L01259 Erythranthe guttata HOM05D004542 ORTHO05D005380 1.5e-37 159.8 140 57.9
PGR083G2602 Punica granatum HOM05D004542 ORTHO05D005380 2.0e-37 159.5 139 61.9
TWI09G1372 Tripterygium wilfordii HOM05D004542 ORTHO05D005380 3.3e-37 158.7 137 60.6
Hma1.2p1_0357F.1_g134240 Hydrangea macrophylla HOM05D004542 ORTHO05D005380 4.4e-37 158.3 103 75.7
Sabra08G0067500 Salix brachista HOM05D004542 ORTHO05D005380 9.7e-37 157.1 150 56.0
THA.LOC104822040 Tarenaya hassleriana HOM05D004542 ORTHO05D005380 1.3e-36 156.8 138 58.7
BcaB03g14086 Brassica carinata HOM05D004542 ORTHO05D005380 4.8e-36 154.8 136 55.9
RcHm_v2.0_Chr6g0251041 Rosa chinensis HOM05D004542 ORTHO05D005380 4.8e-36 154.8 143 59.4
Solyc04g005590.3 Solanum lycopersicum HOM05D004542 ORTHO05D005380 4.8e-36 154.8 143 58.7
Nitab4.5_0000391g0330 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.1e-35 153.7 136 60.3
Sopen05g007930 Solanum pennellii HOM05D004542 ORTHO05D005380 1.1e-35 153.7 143 62.2
PGSC0003DMG400002854 Solanum tuberosum HOM05D004542 ORTHO05D005380 1.1e-35 153.7 143 58.0
Sp5g24560 Schrenkiella parvula HOM05D004542 ORTHO05D005380 1.4e-35 153.3 136 58.8
C05p24230 Brassica napus HOM05D004542 ORTHO05D005380 4.1e-35 151.8 138 55.1
BolC5t31159H Brassica oleracea HOM05D004542 ORTHO05D005380 4.1e-35 151.8 138 55.1
Rhsim05G0092000 Rhododendron simsii HOM05D004542 ORTHO05D005380 4.1e-35 151.8 130 63.1
RhsimUnG0183400 Rhododendron simsii HOM05D004542 ORTHO05D005380 4.1e-35 151.8 130 63.1
A07p13070 Brassica napus HOM05D004542 ORTHO05D005380 7.0e-35 151.0 140 55.7
Lsat_1_v5_gn_8_48901 Lactuca sativa HOM05D004542 ORTHO05D005380 7.0e-35 151.0 142 55.6
BcaC06g35127 Brassica carinata HOM05D004542 ORTHO05D005380 1.2e-34 150.2 138 55.8
Carub.0001s2428 Capsella rubella HOM05D004542 ORTHO05D005380 1.2e-34 150.2 142 54.9
Sopen04g001630 Solanum pennellii HOM05D004542 ORTHO05D005380 1.2e-34 150.2 136 58.8
BraA07t29078Z Brassica rapa HOM05D004542 ORTHO05D005380 2.0e-34 149.4 140 55.0
ECA233G6069 Erigeron canadensis HOM05D004542 ORTHO05D005380 2.0e-34 149.4 145 57.2
Nitab4.5_0013306g0010 Nicotiana tabacum HOM05D004542 ORTHO05D005380 2.0e-34 149.4 137 58.4
HanXRQChr12g0361941 Helianthus annuus HOM05D004542 ORTHO05D005380 4.5e-34 148.3 128 60.9
BcaC05g26392 Brassica carinata HOM05D004542 ORTHO05D005380 5.9e-34 147.9 138 54.3
Psat0s1693g0080 Pisum sativum HOM05D004542 ORTHO05D005380 5.9e-34 147.9 142 55.6
Solyc05g013190.4 Solanum lycopersicum HOM05D004542 ORTHO05D005380 5.9e-34 147.9 143 60.8
C07p19550 Brassica napus HOM05D004542 ORTHO05D005380 7.7e-34 147.5 138 55.1
BolC7t42472H Brassica oleracea HOM05D004542 ORTHO05D005380 7.7e-34 147.5 138 55.1
Thhalv10009076m.g Eutrema salsugineum HOM05D004542 ORTHO05D005380 1.7e-33 146.4 136 54.4
AL2G28600 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 2.2e-33 146.0 143 55.9
DCAR_027429 Daucus carota HOM05D004542 ORTHO05D005380 2.2e-33 146.0 190 45.8
Sc03g0001820 Simmondsia chinensis HOM05D004542 ORTHO05D005380 3.8e-33 145.2 142 54.2
AT1G26740 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 8.5e-33 144.1 135 55.6
CARHR025220 Cardamine hirsuta HOM05D004542 ORTHO05D005380 8.5e-33 144.1 135 54.8
BraA09t39513Z Brassica rapa HOM05D004542 ORTHO05D005380 1.1e-32 143.7 138 52.9
AL1G38970 Arabidopsis lyrata HOM05D004542 ORTHO05D005380 1.5e-32 143.3 135 54.8
Ca_18347_v3 Cicer arietinum L. HOM05D004542 ORTHO05D005380 1.5e-32 143.3 141 53.9
Sc14g0007580 Simmondsia chinensis HOM05D004542 ORTHO05D005380 1.5e-32 143.3 137 56.9
A09p40150 Brassica napus HOM05D004542 ORTHO05D005380 3.2e-32 142.1 138 52.2
HanXRQChr15g0476941 Helianthus annuus HOM05D004542 ORTHO05D005380 4.2e-32 141.7 131 57.3
Eucgr.D00185 Eucalyptus grandis HOM05D004542 ORTHO05D005380 9.4e-32 140.6 122 59.8
SalBow1G8597 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.2e-31 140.2 133 57.1
TPR.G5742 Trifolium pratense HOM05D004542 ORTHO05D005380 1.2e-31 140.2 140 53.6
Glyma.05G118100 Glycine max HOM05D004542 ORTHO05D005380 1.6e-31 139.8 144 52.8
Glyma.08G073000 Glycine max HOM05D004542 ORTHO05D005380 8.0e-31 137.5 144 52.1
Nn3g17306 Nelumbo nucifera HOM05D004542 ORTHO05D005380 1.0e-30 137.1 128 57.0
Aqoxy3G03464 Aquilegia oxysepala HOM05D004542 ORTHO05D005380 1.4e-30 136.7 130 56.2
ECA246G0207 Erigeron canadensis HOM05D004542 ORTHO05D005380 1.4e-30 136.7 143 52.4
arahy.Tifrunner.gnm1.ann1.53F0XR Arachis hypogaea HOM05D004542 ORTHO05D005380 8.8e-30 134.0 134 52.2
arahy.Tifrunner.gnm1.ann1.H527P9 Arachis hypogaea HOM05D004542 ORTHO05D005380 8.8e-30 134.0 134 52.2
AUR62031723 Chenopodium quinoa HOM05D004542 ORTHO05D005380 1.2e-29 133.7 138 51.4
Medtr1g025320 Medicago truncatula HOM05D004542 ORTHO05D005380 1.2e-29 133.7 129 55.8
Phvul.002G208200 Phaseolus vulgaris HOM05D004542 ORTHO05D005380 1.2e-29 133.7 146 52.1
Nn3g18387 Nelumbo nucifera HOM05D004542 ORTHO05D005380 1.5e-29 133.3 142 52.1
SalBow1G7833 Salvia bowleyana HOM05D004542 ORTHO05D005380 2.6e-29 132.5 133 54.9
EL10Ac2g02750 Beta vulgaris HOM05D004542 ORTHO05D005380 5.7e-29 131.3 143 51.0
Sed0021036 Sechium edule HOM05D004542 ORTHO05D005380 5.7e-29 131.3 130 53.8
SGA_v2.0_scaffold455G51899 Striga asiatica HOM05D004542 ORTHO05D005380 5.7e-29 131.3 128 57.8
Nitab4.5_0001077g0020 Nicotiana tabacum HOM05D004542 ORTHO05D005380 7.5e-29 131.0 156 48.1
CsaV3_5G032980 Cucumis sativus L. HOM05D004542 ORTHO05D005380 9.7e-29 130.6 136 52.2
Lalb_Chr10g0097781 Lupinus albus HOM05D004542 ORTHO05D005380 9.7e-29 130.6 130 53.8
SalBow1G4390 Salvia bowleyana HOM05D004542 ORTHO05D005380 1.7e-28 129.8 133 54.1
Ah.08g212630 Amaranthus hybridus HOM05D004542 ORTHO05D005380 2.2e-28 129.4 126 54.0
MBI02_g20485_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.2e-28 129.4 120 57.5
PSO063G3361 Papaver somniferum HOM05D004542 ORTHO05D005380 2.2e-28 129.4 138 52.2
COL.COLO4_32021 Corchorus olitorius HOM05D004542 ORTHO05D005380 3.7e-28 128.6 112 62.5
Glyma.06G320500 Glycine max HOM05D004542 ORTHO05D005380 8.2e-28 127.5 143 50.3
CANSAT21G0056 Cannabis sativa HOM05D004542 ORTHO05D005380 1.1e-27 127.1 114 60.5
Oeu054854.1 Olea europaea HOM05D004542 ORTHO05D005380 1.8e-27 126.3 114 63.2
ClCG05G024060 Citrullus lanatus HOM05D004542 ORTHO05D005380 2.4e-27 125.9 144 50.0
MELO3C012119.2 Cucumis melo HOM05D004542 ORTHO05D005380 2.4e-27 125.9 151 53.0
VMungo0251G2924 Vigna mungo HOM05D004542 ORTHO05D005380 2.4e-27 125.9 143 48.3
CDE04G0708 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 9.1e-27 124.0 139 48.9
TPR.G8852 Trifolium pratense HOM05D004542 ORTHO05D005380 2.0e-26 122.9 141 48.9
Haze_11968 Corylus avellana HOM05D004542 ORTHO05D005380 4.5e-26 121.7 109 59.6
Manes.05G105400 Manihot esculenta HOM05D004542 ORTHO05D005380 2.2e-25 119.4 114 57.9
Lj4g0012875 Lotus japonicus HOM05D004542 ORTHO05D005380 3.8e-25 118.6 140 49.3
Hund04421 Selenicereus undatus HOM05D004542 ORTHO05D005380 5.0e-25 118.2 113 55.8
CDE07G0585 Ceratophyllum demersum HOM05D004542 ORTHO05D005380 8.5e-25 117.5 128 53.1
AUR62032610 Chenopodium quinoa HOM05D004542 ORTHO05D005380 3.2e-24 115.5 172 40.7
Lj4g0007672 Lotus japonicus HOM05D004542 ORTHO05D005380 6.1e-23 111.3 140 46.4
Os10g0407100 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 8.0e-23 110.9 60 78.3
Os03g0168900 Oryza sativa ssp. japonica HOM05D004542 ORTHO05D005380 1.8e-22 109.8 59 76.3
Zm00001eb402400 Zea mays HOM05D004542 ORTHO05D005380 2.3e-22 109.4 123 50.4
AT1G69485 Arabidopsis thaliana HOM05D004542 ORTHO05D005380 5.2e-22 108.2 64 75.0
Ciclev10013639m.g Citrus clementina HOM05D004542 ORTHO05D005380 5.2e-22 108.2 132 46.2
SalBow1G1756 Salvia bowleyana HOM05D004542 ORTHO05D005380 5.2e-22 108.2 59 81.4
MD13G1284400 Malus domestica HOM05D002269 ORTHO05D005380 1.2e-21 107.1 171 42.1
vmacro01351 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 7.5e-21 104.4 90 63.3
Sp1g22070 Schrenkiella parvula HOM05D004542 ORTHO05D005380 3.7e-20 102.1 115 47.8
Sopen03g017060 Solanum pennellii HOM05D004542 ORTHO05D005380 1.2e-18 97.1 65 67.7
CSS0040796 Camellia sinensis var. sinensis HOM05D004542 ORTHO05D005380 2.0e-18 96.3 56 80.4
COL.COLO4_27991 Corchorus olitorius HOM05D004542 ORTHO05D005380 2.0e-18 96.3 104 55.8
Carub.0002s1610 Capsella rubella HOM05D004542 ORTHO05D005380 7.2e-16 87.8 50 74.0
Mapoly0152s0024 Marchantia polymorpha HOM05D004542 ORTHO05D005380 1.6e-15 86.7 51 68.6
Nitab4.5_0000014g0150 Nicotiana tabacum HOM05D004542 ORTHO05D005380 1.6e-15 86.7 148 41.2
Pp3c1_32410 Physcomitrium patens HOM05D004542 ORTHO05D005380 2.1e-15 86.3 52 71.2
CBR_g23146 Chara braunii HOM05D004542 ORTHO05D005380 8.0e-15 84.3 50 68.0
PSO782G1969 Papaver somniferum HOM05D004542 ORTHO05D005380 5.2e-14 81.6 114 45.6
Sabra10G0125700 Salix brachista HOM05D004542 ORTHO05D005380 8.9e-14 80.9 98 46.9
Glyma.04G115800 Glycine max HOM05D004542 ORTHO05D005380 2.0e-13 79.7 111 45.0
COL.COLO4_27990 Corchorus olitorius HOM05D004542 ORTHO05D005380 4.4e-13 78.6 87 52.9
AagrBONN_evm.TU.Sc2ySwM_228.5417 Anthoceros agrestis HOM05D004542 ORTHO05D005380 9.8e-13 77.4 54 64.8
SMO358G0607 Selaginella moellendorffii HOM05D000228 ORTHO05D005112 8.3e-12 74.3 49 61.2
MCO02G272 Micromonas commoda HOM05D004542 ORTHO05D005380 5.4e-11 71.6 147 34.7
PGSC0003DMG400005564 Solanum tuberosum HOM05D004542 ORTHO05D005380 5.4e-11 71.6 89 48.3
MBI02_g44667_MAGBIO Magnolia biondii HOM05D004542 ORTHO05D005380 2.7e-10 69.3 86 46.5
Zm00001eb005320 Zea mays HOM05D004542 ORTHO05D005380 3.5e-10 68.9 86 45.3
SalBow1G4992 Salvia bowleyana HOM05D004542 ORTHO05D005380 7.3e-08 61.2 86 46.5
unitig_8.g3954 Utricularia gibba HOM05D006796 ORTHO05D008615 1.6e-07 60.1 37 73.0
SalBow1G0501 Salvia bowleyana HOM05D004542 ORTHO05D005380 8.0e-07 57.8 86 45.3
SEGI_34151 Sequoiadendron giganteum HOM05D004542 ORTHO05D005380 2.3e-06 56.2 36 69.4
vmacro01352 Vaccinium macrocarpon HOM05D004542 ORTHO05D005380 8.9e-06 54.3 25 92.0


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