Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031113 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 2.6e-120 436.0 341 100.0
CSS0004621 Camellia sinensis var. sinensis HOM05D006485 ORTHO05D006108 2.1e-69 266.9 340 79.1
FAN02G3096 Fragaria x ananassa HOM05D006485 ORTHO05D006108 5.1e-15 86.3 191 37.2
CiPaw.10G003000 Carya illinoinensis HOM05D006485 ORTHO05D006108 8.1e-13 79.0 108 50.9
Carub.0004s1846 Capsella rubella HOM05D006485 ORTHO05D006108 1.1e-12 78.6 175 35.4
Migut.C01359 Erythranthe guttata HOM05D011389 ORTHO05D006108 1.1e-12 78.6 137 44.5
FAN09G1969 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.1e-12 78.6 184 36.4
PSO063G6051 Papaver somniferum HOM05D006485 ORTHO05D006108 5.2e-12 76.3 134 39.6
Peaxi162Scf00078g00310 Petunia axillaris HOM05D011389 ORTHO05D006108 6.8e-12 75.9 111 44.1
PSO339G3752 Papaver somniferum HOM05D006485 ORTHO05D006108 8.9e-12 75.5 133 38.3
Aqoxy1G01006 Aquilegia oxysepala HOM05D006485 ORTHO05D006108 2.0e-11 74.3 165 37.0
FAN09G4412 Fragaria x ananassa HOM05D006485 ORTHO05D006108 2.6e-11 73.9 184 35.9
Lj3C1005T3 Lonicera japonica HOM05D011389 ORTHO05D006108 2.6e-11 73.9 125 44.8
TAR623G0376 Trochodendron aralioides HOM05D006485 ORTHO05D006108 5.8e-11 72.8 136 41.9
vmacro08809 Vaccinium macrocarpon HOM05D011389 ORTHO05D006108 7.6e-11 72.4 92 47.8
FAN14G0187 Fragaria x ananassa HOM05D006485 ORTHO05D006108 2.9e-10 70.5 184 34.8
SGA_v2.0_scaffold118G32589 Striga asiatica HOM05D011389 ORTHO05D006108 4.9e-10 69.7 138 37.7
Rhsim04G0137200 Rhododendron simsii HOM05D000023 ORTHO05D000014 6.4e-10 69.3 97 47.4
FAN05G3442 Fragaria x ananassa HOM05D006485 ORTHO05D006108 1.1e-09 68.6 118 41.5
Sp4g18920 Schrenkiella parvula HOM05D006485 ORTHO05D006108 1.9e-09 67.8 182 33.0
EL10Ac7g16753 Beta vulgaris HOM05D006485 ORTHO05D006108 3.2e-09 67.0 168 33.9
FAN05G4746 Fragaria x ananassa HOM05D006485 ORTHO05D006108 4.1e-09 66.6 101 44.6
TWI53G1251 Tripterygium wilfordii HOM05D006485 ORTHO05D006108 7.1e-09 65.9 167 34.1
Nn2g13931 Nelumbo nucifera HOM05D006485 ORTHO05D006108 1.6e-08 64.7 182 31.3
Peaxi162Scf00500g00067 Petunia axillaris HOM05D006485 ORTHO05D006108 2.1e-08 64.3 117 40.2
Sc02g0001270 Simmondsia chinensis HOM05D006485 ORTHO05D006108 2.1e-08 64.3 144 34.7
MD09G1267600 Malus domestica HOM05D006485 ORTHO05D006108 7.8e-08 62.4 89 43.8
RcHm_v2.0_Chr3g0471651 Rosa chinensis HOM05D006485 ORTHO05D006108 7.8e-08 62.4 124 37.1
Thhalv10017525m.g Eutrema salsugineum HOM05D006485 ORTHO05D006108 1.0e-07 62.0 179 31.3
Migut.L01738 Erythranthe guttata HOM05D013674 ORTHO05D006108 1.3e-07 61.6 127 39.4
CAN.G824.55 Capsicum annuum HOM05D006485 ORTHO05D006108 1.7e-07 61.2 75 49.3
Ciclev10013512m.g Citrus clementina HOM05D006485 ORTHO05D006108 1.7e-07 61.2 411 40.6
Actinidia32467 Actinidia chinensis HOM05D011389 ORTHO05D006108 6.6e-07 59.3 364 45.9
Hund12313 Selenicereus undatus HOM05D006485 ORTHO05D006108 6.6e-07 59.3 137 37.2
PGSC0003DMG400020976 Solanum tuberosum HOM05D011389 ORTHO05D006108 1.1e-06 58.5 86 43.0
Ah.15g091240 Amaranthus hybridus HOM05D011389 ORTHO05D006108 1.5e-06 58.2 142 36.6
QL07p041110 Quercus lobata HOM05D006485 ORTHO05D006108 1.9e-06 57.8 89 43.8
Sopen11g019160 Solanum pennellii HOM05D011389 ORTHO05D006108 1.9e-06 57.8 115 38.3
Solyc11g042800.2 Solanum lycopersicum HOM05D011389 ORTHO05D006108 3.3e-06 57.0 113 36.3
Nitab4.5_0011622g0020 Nicotiana tabacum HOM05D011389 ORTHO05D006108 4.3e-06 56.6 84 41.7
PGSC0003DMG400002731 Solanum tuberosum HOM05D006485 ORTHO05D006108 5.6e-06 56.2 96 45.8


User provided reference genes

Program Settings