Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031083 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 2.7e-129 465.3 231 100.0
CSS0010285 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.9e-119 432.6 292 78.1
Oeu001640.1 Olea europaea HOM05D006847 ORTHO05D008685 2.8e-86 322.4 294 57.5
Lj6C772T8 Lonicera japonica HOM05D006847 ORTHO05D008685 1.7e-83 313.2 293 56.0
Actinidia24040 Actinidia chinensis HOM05D006847 ORTHO05D008685 1.5e-82 310.1 291 57.0
SalBow2G2641 Salvia bowleyana HOM05D006847 ORTHO05D008685 1.9e-82 309.7 294 54.1
Dinv33999 Davidia involucrata HOM05D006847 ORTHO05D008685 9.5e-82 307.4 294 57.8
Thecc.02G320200 Theobroma cacao HOM05D006847 ORTHO05D008685 3.6e-81 305.4 294 56.1
COL.COLO4_27774 Corchorus olitorius HOM05D006847 ORTHO05D008685 4.7e-81 305.1 293 55.6
TAR622G1172 Trochodendron aralioides HOM05D006847 ORTHO05D008685 1.0e-80 303.9 294 55.1
DCAR_023729 Daucus carota HOM05D006847 ORTHO05D008685 2.3e-80 302.8 296 55.7
Atru.chr11.1527 Acer truncatum HOM05D006847 ORTHO05D008685 4.4e-79 298.5 291 56.7
Gohir.A03G107200 Gossypium hirsutum HOM05D006847 ORTHO05D008685 5.7e-79 298.1 294 54.1
Cc11_g11380 Coffea canephora HOM05D006847 ORTHO05D008685 7.5e-79 297.7 294 53.1
CANSAT64G2316 Cannabis sativa HOM05D006847 ORTHO05D008685 2.2e-78 296.2 294 54.8
Gorai.005G148200 Gossypium raimondii HOM05D006847 ORTHO05D008685 2.8e-78 295.8 294 53.7
Potri.008G113000 Populus trichocarpa HOM05D006847 ORTHO05D008685 4.9e-78 295.0 297 55.2
Duzib268G0361 Durio zibethinus HOM05D006847 ORTHO05D008685 6.3e-78 294.7 294 53.4
Ciclev10031661m.g Citrus clementina HOM05D006847 ORTHO05D008685 1.8e-77 293.1 295 55.9
GSVIVG01010124001 Vitis vinifera HOM05D006847 ORTHO05D008685 2.4e-77 292.7 294 54.8
Nitab4.5_0000259g0050 Nicotiana tabacum HOM05D006847 ORTHO05D008685 5.4e-77 291.6 292 52.4
Nitab4.5_0002309g0040 Nicotiana tabacum HOM05D006847 ORTHO05D008685 5.4e-77 291.6 292 53.4
Oeu021813.1 Olea europaea HOM05D006847 ORTHO05D008685 5.4e-77 291.6 294 53.4
TAR374G0132 Trochodendron aralioides HOM05D006847 ORTHO05D008685 5.4e-77 291.6 294 54.8
Lj3C1026T6 Lonicera japonica HOM05D006847 ORTHO05D008685 7.0e-77 291.2 295 54.6
MSTRG.7721 Avicennia marina HOM05D006847 ORTHO05D008685 2.0e-76 289.7 294 54.1
PGSC0003DMG400001803 Solanum tuberosum HOM05D006847 ORTHO05D008685 1.0e-75 287.3 291 53.3
Gohir.D02G132300 Gossypium hirsutum HOM05D006847 ORTHO05D008685 1.7e-75 286.6 276 55.4
Sopen01g032850 Solanum pennellii HOM05D006847 ORTHO05D008685 3.8e-75 285.4 292 53.1
Haze_11844 Corylus avellana HOM05D006847 ORTHO05D008685 5.0e-75 285.0 294 54.4
Lsat_1_v5_gn_8_36700 Lactuca sativa HOM05D006847 ORTHO05D008685 8.6e-75 284.3 295 51.9
Migut.L01151 Erythranthe guttata HOM05D006847 ORTHO05D008685 1.5e-74 283.5 292 52.4
Migut.N00803 Erythranthe guttata HOM05D006847 ORTHO05D008685 3.3e-74 282.3 292 51.7
Eucgr.G02408 Eucalyptus grandis HOM05D006847 ORTHO05D008685 1.6e-73 280.0 296 51.7
ECA233G1196 Erigeron canadensis HOM05D006847 ORTHO05D008685 2.1e-73 279.6 294 50.3
Actinidia31921 Actinidia chinensis HOM05D006847 ORTHO05D008685 8.0e-73 277.7 197 70.1
Hma1.2p1_1348F.1_g277280 Hydrangea macrophylla HOM05D006847 ORTHO05D008685 3.0e-72 275.8 286 53.5
Aqoxy3G03766 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 4.0e-72 275.4 295 50.5
Potri.010G136300 Populus trichocarpa HOM05D006847 ORTHO05D008685 4.0e-72 275.4 295 51.9
HanXRQChr08g0215061 Helianthus annuus HOM05D006847 ORTHO05D008685 2.0e-71 273.1 294 50.3
Manes.14G092000 Manihot esculenta HOM05D006847 ORTHO05D008685 4.4e-71 271.9 294 51.0
ClCG05G023430 Citrullus lanatus HOM05D006847 ORTHO05D008685 6.4e-70 268.1 291 52.2
PGR119G0337 Punica granatum HOM05D006847 ORTHO05D008685 6.4e-70 268.1 302 49.0
RcHm_v2.0_Chr4g0437071 Rosa chinensis HOM05D006847 ORTHO05D008685 8.3e-70 267.7 298 51.0
Cfa008830 Carpinus fangiana HOM05D006847 ORTHO05D008685 1.1e-69 267.3 294 52.7
MD13G1054900 Malus domestica HOM05D006847 ORTHO05D008685 1.1e-69 267.3 295 49.8
CiPaw.06G095800 Carya illinoinensis HOM05D006847 ORTHO05D008685 2.4e-69 266.2 294 52.0
FvH4_4g28930 Fragaria vesca HOM05D006847 ORTHO05D008685 3.5e-68 262.3 295 49.8
MBI14_g08222_MAGBIO Magnolia biondii HOM05D006847 ORTHO05D008685 6.0e-68 261.5 292 47.6
Sed0007808 Sechium edule HOM05D006847 ORTHO05D008685 1.3e-67 260.4 291 50.9
CAN.G869.31 Capsicum annuum HOM05D006847 ORTHO05D008685 1.7e-67 260.0 293 49.1
Psat4g123400 Pisum sativum HOM05D006847 ORTHO05D008685 1.7e-67 260.0 291 47.4
TWI75G1304 Tripterygium wilfordii HOM05D006847 ORTHO05D008685 1.7e-67 260.0 295 51.5
PGSC0003DMG400019650 Solanum tuberosum HOM05D006847 ORTHO05D008685 2.3e-67 259.6 293 48.8
Ca_22680_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 1.9e-66 256.5 291 47.1
Lj2g0006896 Lotus japonicus HOM05D006847 ORTHO05D008685 3.3e-66 255.8 291 47.4
MELO3C012175.2 Cucumis melo HOM05D006847 ORTHO05D008685 1.2e-65 253.8 291 48.8
Sed0008138 Sechium edule HOM05D006847 ORTHO05D008685 1.6e-65 253.4 291 48.5
Sopen05g006440 Solanum pennellii HOM05D006847 ORTHO05D008685 2.8e-65 252.7 292 47.9
arahy.Tifrunner.gnm1.ann1.9XA9EY Arachis hypogaea HOM05D006847 ORTHO05D008685 4.7e-65 251.9 291 48.5
arahy.Tifrunner.gnm1.ann1.B51XMH Arachis hypogaea HOM05D006847 ORTHO05D008685 4.7e-65 251.9 291 48.1
Glyma.02G124600 Glycine max HOM05D006847 ORTHO05D008685 4.7e-65 251.9 292 48.6
LjContig00408g0014580 Lotus japonicus HOM05D006847 ORTHO05D008685 4.7e-65 251.9 293 47.8
Ca_05192_v3 Cicer arietinum L. HOM05D006847 ORTHO05D008685 8.0e-65 251.1 291 48.5
FAN17G2474 Fragaria x ananassa HOM05D006847 ORTHO05D008685 8.0e-65 251.1 314 46.2
FAN12G2539 Fragaria x ananassa HOM05D006847 ORTHO05D008685 1.4e-64 250.4 315 46.7
MD16G1053800 Malus domestica HOM05D006847 ORTHO05D008685 1.4e-64 250.4 298 49.0
CsaV3_5G033580 Cucumis sativus L. HOM05D006847 ORTHO05D008685 2.3e-64 249.6 291 49.8
Medtr8g065720 Medicago truncatula HOM05D006847 ORTHO05D008685 3.1e-64 249.2 291 46.7
TPR.G29773 Trifolium pratense HOM05D006847 ORTHO05D008685 1.5e-63 246.9 308 44.5
Actinidia19898 Actinidia chinensis HOM05D006847 ORTHO05D008685 4.4e-63 245.4 166 71.1
Aqoxy3G00572 Aquilegia oxysepala HOM05D006847 ORTHO05D008685 1.7e-62 243.4 295 47.1
TPR.G20006 Trifolium pratense HOM05D006847 ORTHO05D008685 1.9e-61 240.0 293 45.4
Peaxi162Scf00188g00923 Petunia axillaris HOM05D006847 ORTHO05D008685 1.3e-59 233.8 255 50.2
Medtr0328s0040 Medicago truncatula HOM05D006847 ORTHO05D008685 1.9e-58 229.9 292 44.5
HPP92_020537 Vanilla planifolia HOM05D006847 ORTHO05D008685 1.5e-55 220.3 291 42.6
ATR0691G250 Amborella trichopoda HOM05D006847 ORTHO05D008685 2.4e-53 213.0 294 43.5
FAN22G0943 Fragaria x ananassa HOM05D006847 ORTHO05D008685 7.8e-52 208.0 318 41.2
ATR0691G163 Amborella trichopoda HOM05D006847 ORTHO05D008685 4.0e-48 195.7 220 50.9
HPP92_020469 Vanilla planifolia HOM05D006847 ORTHO05D008685 6.2e-41 171.8 250 43.2
CSS0029748 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D008685 1.4e-37 160.6 251 41.0
HPP92_026164 Vanilla planifolia HOM05D006847 ORTHO05D008685 4.2e-37 159.1 236 44.5
Pp3c6_17060 Physcomitrium patens HOM05D006847 ORTHO05D008685 9.3e-37 157.9 314 34.4
AagrBONN_evm.TU.Sc2ySwM_368.2780 Anthoceros agrestis HOM05D006847 ORTHO05D008685 2.7e-36 156.4 299 34.1
Pp3c5_12950 Physcomitrium patens HOM05D006847 ORTHO05D008685 7.8e-36 154.8 314 34.1
Mapoly0024s0128 Marchantia polymorpha HOM05D006847 ORTHO05D008685 5.1e-35 152.1 301 34.6
Psat2g097480 Pisum sativum HOM05D006847 ORTHO05D008685 4.8e-33 145.6 242 37.6
Pp3c27_4530 Physcomitrium patens HOM05D006847 ORTHO05D008685 2.7e-28 129.8 329 27.7
SEGI_24845 Sequoiadendron giganteum HOM05D006847 ORTHO05D008685 2.3e-27 126.7 260 35.0
Pp3c4_7760 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.1e-24 117.9 149 45.0
Pp3c3_23290 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.3e-22 110.9 340 28.5
Sabra10G0104800 Salix brachista HOM05D006847 ORTHO05D008685 2.9e-22 109.8 101 60.4
Nn4g23575 Nelumbo nucifera HOM05D006847 ORTHO05D008685 1.9e-21 107.1 58 81.0
Solyc05g010640.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 6.7e-19 98.6 193 34.2
SMO198G0052 Selaginella moellendorffii HOM05D006847 ORTHO05D008685 2.1e-17 93.6 60 66.7
CAN.G992.5 Capsicum annuum HOM05D006847 ORTHO05D008685 6.5e-14 82.0 55 70.9
arahy.Tifrunner.gnm1.ann1.JA47JZ Arachis hypogaea HOM05D006847 ORTHO05D008685 1.5e-10 70.9 37 83.8
Cpa.g.c44692 Carica papaya HOM05D006847 ORTHO05D008685 1.3e-09 67.8 35 85.7
Cre06.g263550 Chlamydomonas reinhardtii HOM05D006847 ORTHO05D008685 2.8e-09 66.6 81 39.5
Medtr8g069545 Medicago truncatula HOM05D006847 ORTHO05D008685 2.4e-08 63.5 35 74.3
Psat2g097440 Pisum sativum HOM05D006847 ORTHO05D008685 3.1e-08 63.2 35 77.1
Nn4g23574 Nelumbo nucifera HOM05D006847 ORTHO05D008685 9.0e-08 61.6 29 93.1
Actinidia31922 Actinidia chinensis HOM05D006847 ORTHO05D008685 3.4e-07 59.7 29 89.7
Pp3c16_11950 Physcomitrium patens HOM05D006847 ORTHO05D008685 1.0e-06 58.2 35 68.6
Solyc01g081280.3 Solanum lycopersicum HOM05D006847 ORTHO05D008685 2.2e-06 57.0 29 82.8
CSS0043445 Camellia sinensis var. sinensis HOM05D006847 ORTHO05D000152 5.0e-06 55.8 29 79.3
arahy.Tifrunner.gnm1.ann1.UQ0TL8 Arachis hypogaea HOM05D006847 ORTHO05D008685 6.5e-06 55.5 28 78.6


User provided reference genes

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