Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0031036 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.8e-30 135.2 66 100.0
CSS0006550 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 5.5e-27 123.6 66 92.4
CSS0019709 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.6e-26 122.1 65 92.3
CSS0049632 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 2.7e-26 121.3 66 90.9
CSS0029746 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-26 120.6 66 90.9
CSS0047172 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 4.7e-26 120.6 66 90.9
CSS0047764 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.0e-25 119.4 66 90.9
CSS0022095 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 6.8e-25 116.7 66 86.4
Lj7A464G38 Lonicera japonica HOM05D006038 ORTHO05D007547 2.6e-24 114.8 65 84.6
GSVIVG01023690001 Vitis vinifera HOM05D006038 ORTHO05D007547 4.4e-24 114.0 64 82.8
SGA_v2.0_scaffold265G46074 Striga asiatica HOM05D006038 ORTHO05D007547 5.7e-24 113.6 65 81.5
Dinv42816 Davidia involucrata HOM05D006038 ORTHO05D007547 7.5e-24 113.2 64 82.8
Dinv43284 Davidia involucrata HOM05D006038 ORTHO05D007547 7.5e-24 113.2 64 82.8
Nitab4.5_0002809g0020 Nicotiana tabacum HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 77.3
Solyc07g006010.3 Solanum lycopersicum HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 77.3
Sopen07g002150 Solanum pennellii HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 77.3
PGSC0003DMG400011212 Solanum tuberosum HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 77.3
Thecc.09G154200 Theobroma cacao HOM05D006038 ORTHO05D007547 1.7e-23 112.1 66 77.3
Manes.14G113700 Manihot esculenta HOM05D006038 ORTHO05D007547 2.2e-23 111.7 64 78.1
CAN.G1190.21 Capsicum annuum HOM05D006038 ORTHO05D007547 4.8e-23 110.5 66 77.3
Gohir.A05G007900 Gossypium hirsutum HOM05D006038 ORTHO05D007547 4.8e-23 110.5 66 75.8
Peaxi162Scf00563g00418 Petunia axillaris HOM05D006038 ORTHO05D007547 4.8e-23 110.5 66 75.8
vmacro06051 Vaccinium macrocarpon HOM05D006038 ORTHO05D007547 4.8e-23 110.5 64 82.8
CANSAT11G1787 Cannabis sativa HOM05D006038 ORTHO05D007547 6.3e-23 110.2 65 75.4
Potri.006G180300 Populus trichocarpa HOM05D006038 ORTHO05D007547 1.1e-22 109.4 64 78.1
MSTRG.6162 Avicennia marina HOM05D006038 ORTHO05D007547 1.4e-22 109.0 63 76.2
DCAR_020091 Daucus carota HOM05D006038 ORTHO05D007547 1.4e-22 109.0 66 77.3
Gohir.D05G008700 Gossypium hirsutum HOM05D006038 ORTHO05D007547 1.4e-22 109.0 66 74.2
Gorai.009G008900 Gossypium raimondii HOM05D006038 ORTHO05D007547 1.4e-22 109.0 66 74.2
Oeu027617.1 Olea europaea HOM05D006038 ORTHO05D007547 1.4e-22 109.0 64 76.6
Prupe.1G102000 Prunus persica HOM05D006038 ORTHO05D007547 1.4e-22 109.0 64 79.7
Glyma.02G206900 Glycine max HOM05D006038 ORTHO05D007547 2.4e-22 108.2 63 77.8
Glyma.17G071100 Glycine max HOM05D006038 ORTHO05D007547 2.4e-22 108.2 63 77.8
Lj4g0023904 Lotus japonicus HOM05D006038 ORTHO05D007547 2.4e-22 108.2 63 77.8
PGR114G0005 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-22 108.2 63 77.8
PGR142G2424 Punica granatum HOM05D006038 ORTHO05D007547 2.4e-22 108.2 63 77.8
Cc06_g14480 Coffea canephora HOM05D006038 ORTHO05D007547 3.1e-22 107.8 66 75.8
Migut.J01393 Erythranthe guttata HOM05D006038 ORTHO05D007547 3.1e-22 107.8 63 76.2
Actinidia38659 Actinidia chinensis HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 79.7
AL7G21280 Arabidopsis lyrata HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 75.0
BcaNung02736 Brassica carinata HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 75.0
Carub.0007s0972 Capsella rubella HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 75.0
CARHR238700 Cardamine hirsuta HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 75.0
THA.LOC104803556 Tarenaya hassleriana HOM05D006038 ORTHO05D007547 4.1e-22 107.5 64 71.9
AT4G30840 Arabidopsis thaliana HOM05D006038 ORTHO05D007547 5.4e-22 107.1 64 73.4
Cpa.g.sc199.14 Carica papaya HOM05D006038 ORTHO05D007547 5.4e-22 107.1 64 76.6
Lalb_Chr13g0300671 Lupinus albus HOM05D006038 ORTHO05D007547 5.4e-22 107.1 63 76.2
Ciclev10008825m.g Citrus clementina HOM05D006038 ORTHO05D007547 7.0e-22 106.7 64 78.1
MD10G1281400 Malus domestica HOM05D006038 ORTHO05D007547 7.0e-22 106.7 62 80.6
Cfa020781 Carpinus fangiana HOM05D006038 ORTHO05D007547 9.1e-22 106.3 64 76.6
Phvul.003G153400 Phaseolus vulgaris HOM05D006038 ORTHO05D007547 9.1e-22 106.3 63 76.2
VMungo1215G1375 Vigna mungo HOM05D006038 ORTHO05D007547 9.1e-22 106.3 63 76.2
Aa31LG2G19530 Aethionema arabicum HOM05D006038 ORTHO05D007547 1.2e-21 105.9 64 70.3
BraA03t15077Z Brassica rapa HOM05D006038 ORTHO05D007547 1.2e-21 105.9 64 73.4
Haze_19138 Corylus avellana HOM05D006038 ORTHO05D007547 1.2e-21 105.9 64 75.0
ECA236G4218 Erigeron canadensis HOM05D006038 ORTHO05D007547 1.2e-21 105.9 66 77.3
Sp7g28720 Schrenkiella parvula HOM05D006038 ORTHO05D007547 1.2e-21 105.9 64 73.4
TAR625G0922 Trochodendron aralioides HOM05D006038 ORTHO05D007547 1.2e-21 105.9 64 78.1
Medtr4g130280 Medicago truncatula HOM05D006038 ORTHO05D007547 1.6e-21 105.5 63 74.6
Psat4g010160 Pisum sativum HOM05D006038 ORTHO05D007547 1.6e-21 105.5 63 74.6
TWI63G0196 Tripterygium wilfordii HOM05D006038 ORTHO05D007547 1.6e-21 105.5 65 73.8
CiPaw.15G164200 Carya illinoinensis HOM05D006038 ORTHO05D007547 2.0e-21 105.1 64 76.6
TPR.G22112 Trifolium pratense HOM05D006038 ORTHO05D007547 4.5e-21 104.0 63 73.0
Sabra06G0137300 Salix brachista HOM05D006038 ORTHO05D007547 5.9e-21 103.6 64 75.0
Ca_21155_v3 Cicer arietinum L. HOM05D006038 ORTHO05D007547 1.0e-20 102.8 63 74.6
EL10Ac8g18905 Beta vulgaris HOM05D006038 ORTHO05D007547 1.7e-20 102.1 66 72.7
FAN17G0258 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.3e-20 101.7 62 77.4
MELO3C004111.2 Cucumis melo HOM05D006038 ORTHO05D007547 2.9e-20 101.3 66 66.7
FvH4_4g09770 Fragaria vesca HOM05D006038 ORTHO05D007547 2.9e-20 101.3 62 77.4
FAN07G2585 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.9e-20 101.3 62 77.4
FAN22G1283 Fragaria x ananassa HOM05D006038 ORTHO05D007547 2.9e-20 101.3 62 77.4
Nn8g40105 Nelumbo nucifera HOM05D006038 ORTHO05D007547 3.8e-20 100.9 64 65.6
QL02p094222 Quercus lobata HOM05D006038 ORTHO05D007547 5.0e-20 100.5 64 71.9
RcHm_v2.0_Chr4g0405491 Rosa chinensis HOM05D006038 ORTHO05D007547 6.6e-20 100.1 62 77.4
CSS0034156 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 8.6e-20 99.8 66 78.8
Atru.chr7.352 Acer truncatum HOM05D006038 ORTHO05D007547 1.1e-19 99.4 64 73.4
CsaV3_2G007740 Cucumis sativus L. HOM05D006038 ORTHO05D007547 1.9e-19 98.6 64 65.6
HanXRQChr06g0179781 Helianthus annuus HOM05D006038 ORTHO05D007547 1.9e-19 98.6 66 71.2
Os08g0266600 Oryza sativa ssp. japonica HOM05D006038 ORTHO05D007547 1.9e-19 98.6 63 66.7
ClCG02G014260 Citrullus lanatus HOM05D006038 ORTHO05D007547 2.5e-19 98.2 64 65.6
Aqoxy7G02400 Aquilegia oxysepala HOM05D006038 ORTHO05D007547 3.3e-19 97.8 63 66.7
Sed0013580 Sechium edule HOM05D006038 ORTHO05D007547 7.2e-19 96.7 64 64.1
Hund08960 Selenicereus undatus HOM05D006038 ORTHO05D007547 7.2e-19 96.7 66 66.7
AUR62028377 Chenopodium quinoa HOM05D006038 ORTHO05D007547 9.5e-19 96.3 64 68.8
AUR62025374 Chenopodium quinoa HOM05D006038 ORTHO05D007547 1.2e-18 95.9 64 67.2
Sc14g0000990 Simmondsia chinensis HOM05D006038 ORTHO05D007547 1.6e-18 95.5 65 61.5
HPP92_020613 Vanilla planifolia HOM05D006038 ORTHO05D007547 2.1e-18 95.1 62 67.7
ATR0580G061 Amborella trichopoda HOM05D006038 ORTHO05D007547 2.8e-18 94.7 57 78.9
Zm00001eb177980 Zea mays HOM05D006038 ORTHO05D007547 2.8e-18 94.7 63 63.5
CDE04G0171 Ceratophyllum demersum HOM05D006038 ORTHO05D007547 1.4e-17 92.4 65 69.2
SEGI_08614 Sequoiadendron giganteum HOM05D006038 ORTHO05D007547 6.8e-17 90.1 65 63.1
CSS0009428 Camellia sinensis var. sinensis HOM05D006038 ORTHO05D007547 1.2e-16 89.4 51 88.2
Rhsim03G0259500 Rhododendron simsii HOM05D006038 ORTHO05D007547 1.2e-16 89.4 55 80.0
Nitab4.5_0001036g0170 Nicotiana tabacum HOM05D006038 ORTHO05D007547 3.7e-15 84.3 48 81.2
PSO017G0013 Papaver somniferum HOM05D006038 ORTHO05D007547 4.9e-15 84.0 63 57.1
PSO170G4900 Papaver somniferum HOM05D006038 ORTHO05D007547 4.9e-15 84.0 63 57.1
BcaNung01557 Brassica carinata HOM05D006038 ORTHO05D007547 2.4e-14 81.6 47 78.7
C07p58240 Brassica napus HOM05D006038 ORTHO05D007547 2.4e-14 81.6 47 78.7
BolC7t46282H Brassica oleracea HOM05D006038 ORTHO05D007547 2.4e-14 81.6 47 78.7
A03p60370 Brassica napus HOM05D006038 ORTHO05D007547 7.0e-14 80.1 47 76.6
Eucgr.K03188 Eucalyptus grandis HOM05D006038 ORTHO05D007547 1.3e-12 75.9 45 77.8
MBI15_g26068_MAGBIO Magnolia biondii HOM05D006038 ORTHO05D007547 1.3e-12 75.9 47 70.2
Lsat_1_v5_gn_8_64821 Lactuca sativa HOM05D006038 ORTHO05D007547 3.9e-12 74.3 48 72.9
Zm00001eb124580 Zea mays HOM05D006038 ORTHO05D007547 1.9e-11 72.0 52 57.7
SMO367G0193 Selaginella moellendorffii HOM05D006038 ORTHO05D007547 4.3e-11 70.9 63 50.8
Ah.14g084370 Amaranthus hybridus HOM05D001135 ORTHO05D001005 9.5e-11 69.7 47 70.2
Zm00001eb038770 Zea mays HOM05D006038 ORTHO05D007547 9.5e-11 69.7 53 58.5
Zm00001eb046820 Zea mays HOM05D006038 ORTHO05D007547 9.5e-11 69.7 53 58.5
Zm00001eb051760 Zea mays HOM05D006038 ORTHO05D007547 9.5e-11 69.7 53 58.5
Zm00001eb253640 Zea mays HOM05D006038 ORTHO05D007547 2.1e-10 68.6 56 55.4
Zm00001eb369920 Zea mays HOM05D006038 ORTHO05D007547 2.8e-10 68.2 57 52.6
Zm00001eb021100 Zea mays HOM05D002913 ORTHO05D026003 2.9e-07 58.2 49 55.1
Zm00001eb156390 Zea mays HOM05D009386 ORTHO05D011419 2.9e-07 58.2 49 55.1
Zm00001eb343430 Zea mays HOM05D002913 ORTHO05D020952 2.9e-07 58.2 49 55.1
Zm00001eb354900 Zea mays HOM05D002913 ORTHO05D026003 2.9e-07 58.2 49 55.1
Pp3c6_28770 Physcomitrium patens HOM05D006038 ORTHO05D007547 3.7e-07 57.8 57 43.9
CBR_g22430 Chara braunii HOM05D006038 ORTHO05D007547 1.9e-06 55.5 57 47.4


User provided reference genes

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