Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030950 Camellia sinensis var. sinensis HOM05D006293 ORTHO05D007971 1.2e-167 593.2 322 100.0
Dinv04963 Davidia involucrata HOM05D006293 ORTHO05D007971 1.2e-122 443.7 323 76.8
Rhsim11G0188600 Rhododendron simsii HOM05D006293 ORTHO05D007971 4.6e-119 431.8 342 69.0
Haze_02189 Corylus avellana HOM05D006293 ORTHO05D007971 4.1e-115 418.7 326 72.4
QL11p047722 Quercus lobata HOM05D006293 ORTHO05D007971 5.3e-115 418.3 329 71.4
Rhsim11G0188500 Rhododendron simsii HOM05D006293 ORTHO05D007971 2.0e-114 416.4 385 61.3
vmacro02255 Vaccinium macrocarpon HOM05D006293 ORTHO05D007971 2.0e-114 416.4 330 72.1
Cfa005191 Carpinus fangiana HOM05D006293 ORTHO05D007971 8.5e-113 411.0 329 69.0
Peaxi162Scf00362g00956 Petunia axillaris HOM05D001375 ORTHO05D001222 2.5e-112 409.5 320 68.1
Potri.004G169200 Populus trichocarpa HOM05D006293 ORTHO05D007971 2.7e-111 406.0 323 72.4
GSVIVG01024071001 Vitis vinifera HOM05D006293 ORTHO05D007971 1.4e-110 403.7 322 69.9
Oeu060421.1 Olea europaea HOM05D006293 ORTHO05D007971 3.9e-110 402.1 326 72.7
Cc02_g16450 Coffea canephora HOM05D006293 ORTHO05D007971 3.3e-109 399.1 321 67.9
Nn5g29105 Nelumbo nucifera HOM05D006293 ORTHO05D007971 3.3e-109 399.1 314 63.1
TAR376G0811 Trochodendron aralioides HOM05D006293 ORTHO05D007971 3.3e-109 399.1 318 64.8
COL.COLO4_17266 Corchorus olitorius HOM05D006293 ORTHO05D007971 2.2e-108 396.4 325 66.2
Prupe.8G161400 Prunus persica HOM05D006293 ORTHO05D007971 2.4e-107 392.9 335 65.4
CAN.G588.32 Capsicum annuum HOM05D006293 ORTHO05D007971 4.1e-107 392.1 326 66.3
PGSC0003DMG400001627 Solanum tuberosum HOM05D006293 ORTHO05D007971 5.3e-107 391.7 322 65.5
Solyc01g111210.3 Solanum lycopersicum HOM05D001375 ORTHO05D001222 7.7e-106 387.9 323 58.8
CiPaw.05G077900 Carya illinoinensis HOM05D006293 ORTHO05D007971 1.3e-105 387.1 295 70.2
Oeu014457.2 Olea europaea HOM05D006293 ORTHO05D007971 1.7e-105 386.7 328 65.5
Manes.11G090800 Manihot esculenta HOM05D006293 ORTHO05D007971 2.2e-105 386.3 321 69.2
FAN15G0431 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.9e-105 386.0 336 61.9
MD05G1116900 Malus domestica HOM05D006293 ORTHO05D007971 3.8e-105 385.6 349 65.6
Sopen01g053260 Solanum pennellii HOM05D006293 ORTHO05D007971 8.5e-105 384.4 324 58.3
Duzib132G0283 Durio zibethinus HOM05D006293 ORTHO05D007971 1.9e-104 383.3 328 66.8
Ciclev10028711m.g Citrus clementina HOM05D006293 ORTHO05D007971 4.2e-104 382.1 364 62.6
RcHm_v2.0_Chr6g0244771 Rosa chinensis HOM05D006293 ORTHO05D007971 1.2e-103 380.6 337 65.3
SGA_v2.0_scaffold32G13265 Striga asiatica HOM05D006293 ORTHO05D007971 2.7e-103 379.4 320 61.6
FAN24G1019 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.6e-103 379.0 360 63.3
Gohir.A01G164300 Gossypium hirsutum HOM05D006293 ORTHO05D007971 7.9e-103 377.9 319 63.0
Glyma.04G005100 Glycine max HOM05D006293 ORTHO05D007971 1.4e-102 377.1 337 64.1
Gohir.D01G156200 Gossypium hirsutum HOM05D006293 ORTHO05D007971 1.8e-102 376.7 315 63.2
FAN27G2989 Fragaria x ananassa HOM05D006293 ORTHO05D007971 2.3e-102 376.3 350 64.0
FAN20G1949 Fragaria x ananassa HOM05D006293 ORTHO05D007971 3.0e-102 375.9 351 63.5
Glyma.06G004900 Glycine max HOM05D006293 ORTHO05D007971 5.1e-102 375.2 315 64.8
Nitab4.5_0000980g0060 Nicotiana tabacum HOM05D001375 ORTHO05D001222 5.1e-102 375.2 322 66.8
Thecc.02G066200 Theobroma cacao HOM05D006293 ORTHO05D007971 5.1e-102 375.2 319 68.0
FvH4_2g01740 Fragaria vesca HOM05D006293 ORTHO05D007971 6.7e-102 374.8 357 63.0
Gorai.002G193700 Gossypium raimondii HOM05D006293 ORTHO05D007971 6.7e-102 374.8 315 62.9
VMungo1309G1166 Vigna mungo HOM05D006293 ORTHO05D007971 3.3e-101 372.5 314 63.7
Phvul.009G025500 Phaseolus vulgaris HOM05D006293 ORTHO05D007971 2.2e-100 369.8 314 65.3
TWI31G0553 Tripterygium wilfordii HOM05D006293 ORTHO05D007971 3.7e-100 369.0 314 64.0
TAR628G0693 Trochodendron aralioides HOM05D006293 ORTHO05D007971 3.7e-100 369.0 322 59.3
Migut.B00115 Erythranthe guttata HOM05D006293 ORTHO05D007971 1.1e-99 367.5 321 64.5
Lj1g0023631 Lotus japonicus HOM05D006293 ORTHO05D007971 1.1e-99 367.5 316 65.5
Ca_15314_v3 Cicer arietinum L. HOM05D006293 ORTHO05D007971 1.8e-99 366.7 322 61.2
CANSAT25G1913 Cannabis sativa HOM05D006293 ORTHO05D007971 2.4e-99 366.3 342 64.3
Medtr3g117760 Medicago truncatula HOM05D006293 ORTHO05D007971 3.1e-99 365.9 316 61.1
Eucgr.G01761 Eucalyptus grandis HOM05D006293 ORTHO05D007971 2.0e-98 363.2 323 64.4
TPR.G38570 Trifolium pratense HOM05D006293 ORTHO05D007971 4.5e-98 362.1 319 63.9
MSTRG.16884 Avicennia marina HOM05D006293 ORTHO05D007971 7.7e-98 361.3 350 58.0
Cpa.g.sc37.182 Carica papaya HOM05D006293 ORTHO05D007971 6.5e-97 358.2 319 66.5
Psat5g003040 Pisum sativum HOM05D006293 ORTHO05D007971 5.5e-96 355.1 333 65.8
ClCG02G011620 Citrullus lanatus HOM05D006293 ORTHO05D007971 9.4e-96 354.4 320 61.2
Nn1g05912 Nelumbo nucifera HOM05D006293 ORTHO05D007971 2.7e-95 352.8 317 61.8
Lsat_1_v5_gn_8_126000 Lactuca sativa HOM05D006293 ORTHO05D007971 3.3e-93 345.9 312 59.9
Lalb_Chr23g0265081 Lupinus albus HOM05D006293 ORTHO05D007971 7.5e-93 344.7 322 63.4
Dinv41970 Davidia involucrata HOM05D006293 ORTHO05D007971 9.7e-93 344.4 274 63.9
Lj5C183T16 Lonicera japonica HOM05D006293 ORTHO05D007971 1.3e-92 344.0 337 61.1
TAR536G0014 Trochodendron aralioides HOM05D006293 ORTHO05D007971 2.2e-92 343.2 318 56.3
HanXRQChr17g0557851 Helianthus annuus HOM05D006293 ORTHO05D007971 4.8e-92 342.0 317 61.2
THA.LOC104804336 Tarenaya hassleriana HOM05D006293 ORTHO05D007971 8.5e-89 331.3 315 56.5
Hund06410 Selenicereus undatus HOM05D006293 ORTHO05D007971 1.1e-88 330.9 324 54.0
Sed0004865 Sechium edule HOM05D006293 ORTHO05D007971 1.5e-88 330.5 324 56.5
EL10Ac9g21428 Beta vulgaris HOM05D006293 ORTHO05D007971 8.0e-87 324.7 356 53.1
ECA233G0605 Erigeron canadensis HOM05D001375 ORTHO05D001222 2.3e-86 323.2 322 56.2
MELO3C020791.2 Cucumis melo HOM05D006293 ORTHO05D007971 5.2e-86 322.0 312 61.9
CARHR106850 Cardamine hirsuta HOM05D006293 ORTHO05D007971 9.1e-83 311.2 333 54.7
DCAR_003705 Daucus carota HOM05D006293 ORTHO05D007971 1.2e-82 310.8 316 59.5
Carub.0003s3038 Capsella rubella HOM05D006293 ORTHO05D007971 1.0e-81 307.8 343 56.0
BcaC04g23011 Brassica carinata HOM05D006293 ORTHO05D007971 2.2e-81 306.6 330 56.7
AL3G49260 Arabidopsis lyrata HOM05D006293 ORTHO05D007971 2.9e-81 306.2 326 55.8
AUR62010081 Chenopodium quinoa HOM05D006293 ORTHO05D007971 6.5e-81 305.1 325 52.9
C09p13060 Brassica napus HOM05D006293 ORTHO05D007971 8.5e-81 304.7 330 56.4
BolC9t54199H Brassica oleracea HOM05D006293 ORTHO05D007971 1.9e-80 303.5 329 56.5
BraA07t28238Z Brassica rapa HOM05D006293 ORTHO05D007971 1.9e-80 303.5 341 56.3
AUR62013075 Chenopodium quinoa HOM05D006293 ORTHO05D007971 4.2e-80 302.4 326 53.4
PSO170G2363 Papaver somniferum HOM05D006293 ORTHO05D007971 4.2e-80 302.4 348 54.9
BcaC06g36161 Brassica carinata HOM05D006293 ORTHO05D007971 5.5e-80 302.0 341 56.3
C07p07090 Brassica napus HOM05D006293 ORTHO05D007971 5.5e-80 302.0 341 56.3
BolC7t41128H Brassica oleracea HOM05D006293 ORTHO05D007971 5.5e-80 302.0 341 56.3
Sc14g0002130 Simmondsia chinensis HOM05D006293 ORTHO05D007971 5.5e-80 302.0 318 52.2
A09p11050 Brassica napus HOM05D006293 ORTHO05D007971 7.2e-80 301.6 341 55.1
MBI05_g30117_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 7.2e-80 301.6 316 50.6
BraA09t36749Z Brassica rapa HOM05D006293 ORTHO05D007971 9.4e-80 301.2 340 55.3
A07p04460 Brassica napus HOM05D006293 ORTHO05D007971 1.2e-79 300.8 341 56.3
ATR0810G191 Amborella trichopoda HOM05D006293 ORTHO05D007971 3.6e-79 299.3 314 52.5
BcaB07g31757 Brassica carinata HOM05D006293 ORTHO05D007971 6.1e-79 298.5 347 55.3
MBI05_g07501_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.8e-78 297.0 316 50.0
MBI05_g47219_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 5.2e-78 295.4 316 50.3
Ah.01g022670 Amaranthus hybridus HOM05D006293 ORTHO05D007971 1.2e-77 294.3 316 53.8
Aa31LG8G13900 Aethionema arabicum HOM05D006293 ORTHO05D007971 1.5e-77 293.9 324 57.4
CsaV3_2G015780 Cucumis sativus L. HOM05D006293 ORTHO05D007971 5.7e-77 292.0 332 57.8
PSO700G0292 Papaver somniferum HOM05D006293 ORTHO05D007971 1.7e-76 290.4 321 49.2
Aqoxy5G00988 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 8.3e-76 288.1 305 54.8
Thhalv10022734m.g Eutrema salsugineum HOM05D006293 ORTHO05D007971 8.3e-76 288.1 379 51.2
AT2G16630 Arabidopsis thaliana HOM05D006293 ORTHO05D007971 2.4e-75 286.6 360 48.1
Sp3g30120 Schrenkiella parvula HOM05D006293 ORTHO05D007971 2.0e-74 283.5 370 51.6
Ah.01g009070 Amaranthus hybridus HOM05D006293 ORTHO05D007971 5.0e-73 278.9 317 50.2
MBI05_g48109_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 1.9e-72 276.9 316 48.7
HanXRQChr10g0298941 Helianthus annuus HOM05D006293 ORTHO05D007971 9.5e-72 274.6 338 49.1
unitig_0.g827 Utricularia gibba HOM05D006293 ORTHO05D007971 2.9e-68 263.1 345 50.4
Aqoxy1G01171 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.1e-64 251.1 259 61.4
unitig_0.g43 Utricularia gibba HOM05D006293 ORTHO05D007971 7.5e-61 238.4 318 43.4
CDE05G1002 Ceratophyllum demersum HOM05D006293 ORTHO05D007971 2.2e-60 236.9 312 43.6
HPP92_013009 Vanilla planifolia HOM05D006293 ORTHO05D007971 1.4e-59 234.2 308 42.5
Nitab4.5_0000283g0050 Nicotiana tabacum HOM05D001375 ORTHO05D001222 1.9e-56 223.8 323 40.9
SEGI_19356 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 1.9e-56 223.8 334 45.5
BcaB03g16385 Brassica carinata HOM05D006293 ORTHO05D007971 3.4e-53 213.0 351 46.4
MD10G1120000 Malus domestica HOM05D006293 ORTHO05D007971 2.1e-50 203.8 131 72.5
MSTRG.20014 Avicennia marina HOM05D006293 ORTHO05D007971 4.6e-50 202.6 164 62.8
MD10G1120100 Malus domestica HOM05D006293 ORTHO05D007971 6.2e-47 192.2 126 66.7
PGR042G0330 Punica granatum HOM05D006293 ORTHO05D007971 6.2e-47 192.2 385 40.8
MBI05_g21530_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.3e-46 190.3 229 45.9
SEGI_14996 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 2.9e-44 183.3 320 41.6
Gohir.1Z049391 Gossypium hirsutum HOM05D006293 ORTHO05D007971 7.6e-37 158.7 156 57.1
ECA234G1535 Erigeron canadensis HOM05D001991 ORTHO05D007971 1.1e-30 138.3 152 46.1
Mapoly0014s0128 Marchantia polymorpha HOM05D006293 ORTHO05D007971 1.1e-30 138.3 319 34.8
Pp3c1_27500 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.1e-30 138.3 296 29.7
Zm00001eb210030 Zea mays HOM05D006293 ORTHO05D007971 5.4e-27 125.9 142 43.0
Pp3c14_8250 Physcomitrium patens HOM05D006293 ORTHO05D007971 1.2e-26 124.8 296 29.4
MBI05_g31848_MAGBIO Magnolia biondii HOM05D006293 ORTHO05D007971 2.3e-25 120.6 97 57.7
SMO223G0025 Selaginella moellendorffii HOM05D006293 ORTHO05D007971 8.7e-25 118.6 325 29.2
Aqoxy6G00177 Aquilegia oxysepala HOM05D006293 ORTHO05D007971 1.1e-24 118.2 114 49.1
SEGI_23181 Sequoiadendron giganteum HOM05D006293 ORTHO05D007971 7.1e-19 99.0 152 40.8
Actinidia00600 Actinidia chinensis HOM05D006293 ORTHO05D007971 1.3e-17 94.7 65 72.3
SGA_v2.0_scaffold9G04828 Striga asiatica HOM05D006293 ORTHO05D007971 4.2e-11 73.2 66 51.5
SMO367G0707 Selaginella moellendorffii HOM05D007363 ORTHO05D009018 3.0e-09 67.0 88 43.2
AagrBONN_evm.TU.Sc2ySwM_368.1639 Anthoceros agrestis HOM05D006293 ORTHO05D009176 1.1e-08 65.1 158 33.5
Lj1g0022592 Lotus japonicus HOM05D007363 ORTHO05D009018 9.0e-06 55.5 67 44.8


User provided reference genes

Program Settings