Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030940 Camellia sinensis var. sinensis HOM05D006257 ORTHO05D007708 2.8e-113 412.1 236 100.0
Actinidia21972 Actinidia chinensis HOM05D006257 ORTHO05D007708 4.8e-81 305.1 237 73.4
Actinidia40485 Actinidia chinensis HOM05D006257 ORTHO05D007708 3.8e-78 295.4 238 71.4
vmacro20574 Vaccinium macrocarpon HOM05D006257 ORTHO05D007708 9.4e-77 290.8 237 73.4
CiPaw.03G245900 Carya illinoinensis HOM05D006257 ORTHO05D007708 8.8e-75 284.3 236 69.9
QL02p088998 Quercus lobata HOM05D006257 ORTHO05D007708 2.5e-74 282.7 235 67.7
TAR636G3495 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.8e-73 279.3 237 71.3
GSVIVG01015564001 Vitis vinifera HOM05D006257 ORTHO05D007708 2.4e-72 276.2 237 72.2
CiPaw.04G172800 Carya illinoinensis HOM05D006257 ORTHO05D007708 3.1e-72 275.8 236 66.9
Prupe.7G245400 Prunus persica HOM05D006257 ORTHO05D007708 1.7e-70 270.0 236 64.8
Potri.006G067600 Populus trichocarpa HOM05D006257 ORTHO05D007708 2.2e-70 269.6 247 66.4
Haze_25555 Corylus avellana HOM05D006257 ORTHO05D007708 3.8e-70 268.9 235 66.8
Duzib187G1365 Durio zibethinus HOM05D006257 ORTHO05D007708 3.8e-70 268.9 236 68.2
Hma1.2p1_0931F.1_g238140 Hydrangea macrophylla HOM05D006257 ORTHO05D007708 6.5e-70 268.1 236 71.2
Potri.018G129600 Populus trichocarpa HOM05D006257 ORTHO05D007708 8.5e-70 267.7 246 66.3
Manes.06G057000 Manihot esculenta HOM05D006257 ORTHO05D007708 1.9e-69 266.5 237 69.6
MD15G1170900 Malus domestica HOM05D006257 ORTHO05D007708 4.2e-69 265.4 237 69.6
MD02G1029500 Malus domestica HOM05D006257 ORTHO05D007708 1.2e-68 263.8 236 64.8
COL.COLO4_35097 Corchorus olitorius HOM05D006257 ORTHO05D007708 2.1e-68 263.1 237 67.5
Thecc.09G128900 Theobroma cacao HOM05D006257 ORTHO05D007708 2.7e-68 262.7 237 68.4
Lj7A424T23 Lonicera japonica HOM05D006257 ORTHO05D007708 3.6e-68 262.3 236 66.9
Duzib168G0222 Durio zibethinus HOM05D006257 ORTHO05D007708 1.4e-67 260.4 239 67.4
Gorai.001G043000 Gossypium raimondii HOM05D006257 ORTHO05D007708 3.0e-67 259.2 236 66.5
Ciclev10009322m.g Citrus clementina HOM05D006257 ORTHO05D007708 3.9e-67 258.8 242 66.9
Gohir.A07G036500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 5.1e-67 258.5 237 64.1
CsaV3_2G002980 Cucumis sativus L. HOM05D006257 ORTHO05D007708 6.7e-67 258.1 241 68.0
Lj4g0014254 Lotus japonicus HOM05D006257 ORTHO05D007708 6.7e-67 258.1 236 66.5
Gohir.D07G040500 Gossypium hirsutum HOM05D006257 ORTHO05D007708 2.6e-66 256.1 239 66.5
Sabra06G0050300 Salix brachista HOM05D006257 ORTHO05D007708 4.4e-66 255.4 264 61.7
Glyma.06G224200 Glycine max HOM05D006257 ORTHO05D007708 7.4e-66 254.6 239 64.9
MELO3C004491.2 Cucumis melo HOM05D006257 ORTHO05D007708 4.8e-65 251.9 242 66.9
Glyma.04G142800 Glycine max HOM05D006257 ORTHO05D007708 6.3e-65 251.5 197 73.1
TPR.G26482 Trifolium pratense HOM05D006257 ORTHO05D007708 1.4e-64 250.4 236 63.1
VMungo1215G0813 Vigna mungo HOM05D006257 ORTHO05D007708 1.8e-64 250.0 195 70.3
PGR102G0698 Punica granatum HOM05D006257 ORTHO05D007708 3.1e-64 249.2 239 62.3
Ca_06925_v3 Cicer arietinum L. HOM05D006257 ORTHO05D007708 5.3e-64 248.4 236 64.0
Phvul.003G166300 Phaseolus vulgaris HOM05D006257 ORTHO05D007708 5.3e-64 248.4 195 71.3
Lalb_Chr13g0301741 Lupinus albus HOM05D006257 ORTHO05D007708 9.1e-64 247.7 236 63.1
Lalb_Chr07g0179081 Lupinus albus HOM05D006257 ORTHO05D007708 1.2e-63 247.3 236 61.4
Cpa.g.sc46.16 Carica papaya HOM05D006257 ORTHO05D007708 1.3e-62 243.8 241 65.1
Atru.chr7.1126 Acer truncatum HOM05D006257 ORTHO05D007708 2.2e-62 243.0 240 61.2
Aqoxy7G02265 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 2.9e-62 242.7 236 62.3
Medtr0339s0030 Medicago truncatula HOM05D006257 ORTHO05D007708 2.9e-62 242.7 236 61.9
PSO210G1954 Papaver somniferum HOM05D006257 ORTHO05D007708 2.9e-62 242.7 242 60.7
Oeu052179.2 Olea europaea HOM05D006257 ORTHO05D007708 6.5e-62 241.5 236 61.4
Sed0025440 Sechium edule HOM05D006257 ORTHO05D007708 8.5e-62 241.1 237 63.3
ClCG11G003160 Citrullus lanatus HOM05D006257 ORTHO05D007708 1.9e-61 240.0 196 68.4
Cc06_g08290 Coffea canephora HOM05D006257 ORTHO05D007708 1.9e-61 240.0 238 59.7
PSO210G1348 Papaver somniferum HOM05D006257 ORTHO05D007708 2.5e-61 239.6 237 59.9
RcHm_v2.0_Chr2g0088141 Rosa chinensis HOM05D006257 ORTHO05D007708 2.5e-61 239.6 237 62.0
Sabra18G0110100 Salix brachista HOM05D006257 ORTHO05D007708 7.2e-61 238.0 219 64.8
Eucgr.C04235 Eucalyptus grandis HOM05D006257 ORTHO05D007708 9.4e-61 237.7 239 60.7
arahy.Tifrunner.gnm1.ann1.BX3F9W Arachis hypogaea HOM05D006257 ORTHO05D007708 1.6e-60 236.9 238 60.9
TWI63G0502 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 3.6e-60 235.7 238 63.9
DCAR_020916 Daucus carota HOM05D006257 ORTHO05D007708 4.7e-60 235.3 238 60.1
Peaxi162Scf00313g00815 Petunia axillaris HOM05D006257 ORTHO05D007708 4.7e-60 235.3 237 59.1
TWI34G0058 Tripterygium wilfordii HOM05D006257 ORTHO05D007708 4.7e-60 235.3 238 65.1
arahy.Tifrunner.gnm1.ann1.FTT948 Arachis hypogaea HOM05D006257 ORTHO05D007708 6.1e-60 235.0 238 60.9
Nitab4.5_0001349g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.0e-59 232.6 237 57.4
Nitab4.5_0006319g0030 Nicotiana tabacum HOM05D006257 ORTHO05D007708 3.0e-59 232.6 237 57.0
Hund09262 Selenicereus undatus HOM05D006257 ORTHO05D007708 5.2e-59 231.9 241 58.9
Lalb_Chr08g0234691 Lupinus albus HOM05D006257 ORTHO05D007708 2.6e-58 229.6 236 59.7
Solyc12g009600.2 Solanum lycopersicum HOM05D006257 ORTHO05D007708 4.4e-58 228.8 235 55.7
Sopen12g004590 Solanum pennellii HOM05D006257 ORTHO05D007708 4.4e-58 228.8 236 55.5
AUR62011151 Chenopodium quinoa HOM05D006257 ORTHO05D007708 7.5e-58 228.0 236 56.4
FvH4_1g03010 Fragaria vesca HOM05D006257 ORTHO05D007708 1.3e-57 227.3 212 62.7
HanXRQChr10g0315681 Helianthus annuus HOM05D006257 ORTHO05D007708 1.3e-57 227.3 236 57.2
FAN23G1258 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-57 226.9 212 62.3
FAN26G0886 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.7e-57 226.9 212 62.7
FAN28G1785 Fragaria x ananassa HOM05D006257 ORTHO05D007708 4.8e-57 225.3 206 63.6
CAN.G551.82 Capsicum annuum HOM05D006257 ORTHO05D007708 6.3e-57 224.9 236 55.9
ECA234G3820 Erigeron canadensis HOM05D006257 ORTHO05D007708 1.4e-56 223.8 236 58.1
MBI04_g29340_MAGBIO Magnolia biondii HOM05D006257 ORTHO05D007708 1.8e-56 223.4 239 59.0
TAR625G1128 Trochodendron aralioides HOM05D006257 ORTHO05D007708 2.4e-56 223.0 149 82.6
EL10Ac8g18684 Beta vulgaris HOM05D006257 ORTHO05D007708 5.3e-56 221.9 234 60.3
AUR62013336 Chenopodium quinoa HOM05D006257 ORTHO05D007708 2.0e-55 219.9 254 52.8
Glyma.17G113300 Glycine max HOM05D006257 ORTHO05D007708 2.6e-55 219.5 197 67.5
Dinv36505 Davidia involucrata HOM05D006257 ORTHO05D007708 3.5e-55 219.2 179 72.6
MSTRG.26415 Avicennia marina HOM05D006257 ORTHO05D007708 5.9e-55 218.4 181 70.7
Oeu038255.2 Olea europaea HOM05D006257 ORTHO05D007708 1.7e-54 216.9 247 54.3
SGA_v2.0_scaffold63G21838 Striga asiatica HOM05D006257 ORTHO05D007708 1.1e-53 214.2 195 62.1
FAN19G0162 Fragaria x ananassa HOM05D006257 ORTHO05D007708 1.9e-53 213.4 175 69.1
THA.LOC104808977 Tarenaya hassleriana HOM05D006257 ORTHO05D007708 3.2e-53 212.6 205 61.5
Ah.09g225230 Amaranthus hybridus HOM05D006257 ORTHO05D007708 4.2e-53 212.2 172 65.1
Migut.K00442 Erythranthe guttata HOM05D006257 ORTHO05D007708 1.2e-52 210.7 260 53.1
Thhalv10028953m.g Eutrema salsugineum HOM05D006257 ORTHO05D007708 2.3e-51 206.5 176 65.9
Sp6g02450 Schrenkiella parvula HOM05D006257 ORTHO05D007708 4.0e-51 205.7 173 66.5
HPP92_024119 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.2e-51 205.3 170 66.5
CARHR250830 Cardamine hirsuta HOM05D006257 ORTHO05D007708 1.2e-50 204.1 170 65.9
CDE07G0641 Ceratophyllum demersum HOM05D006257 ORTHO05D007708 2.0e-50 203.4 183 63.4
Os06g0705100 Oryza sativa ssp. japonica HOM05D006257 ORTHO05D007708 2.0e-50 203.4 154 71.4
BcaC04g23996 Brassica carinata HOM05D006257 ORTHO05D007708 2.6e-50 203.0 204 55.9
BolC9t53138H Brassica oleracea HOM05D006257 ORTHO05D007708 2.6e-50 203.0 174 63.8
A09p01980 Brassica napus HOM05D006257 ORTHO05D007708 4.4e-50 202.2 174 63.2
C09p02090 Brassica napus HOM05D006257 ORTHO05D007708 5.7e-50 201.8 174 63.2
HPP92_024114 Vanilla planifolia HOM05D006257 ORTHO05D007708 5.7e-50 201.8 163 66.9
BraA09t35849Z Brassica rapa HOM05D006257 ORTHO05D007708 7.5e-50 201.4 174 63.2
Lsat_1_v5_gn_5_95081 Lactuca sativa HOM05D006257 ORTHO05D007708 7.5e-50 201.4 229 53.7
ATR0598G180 Amborella trichopoda HOM05D006257 ORTHO05D007708 1.7e-49 200.3 147 73.5
CANSAT11G2152 Cannabis sativa HOM05D006257 ORTHO05D007708 2.8e-49 199.5 134 78.4
Nn8g39488 Nelumbo nucifera HOM05D006257 ORTHO05D007708 2.8e-49 199.5 205 62.4
Zm00001eb227340 Zea mays HOM05D006257 ORTHO05D007708 2.8e-49 199.5 168 64.3
Carub.0006s3460 Capsella rubella HOM05D006257 ORTHO05D007708 4.8e-49 198.7 173 65.3
AL6G50510 Arabidopsis lyrata HOM05D006257 ORTHO05D007708 1.4e-48 197.2 176 64.2
AT4G02530 Arabidopsis thaliana HOM05D006257 ORTHO05D007708 1.4e-48 197.2 173 65.3
unitig_37.g12643 Utricularia gibba HOM05D006257 ORTHO05D007708 1.8e-48 196.8 166 65.1
Aa31LG5G2160 Aethionema arabicum HOM05D006257 ORTHO05D007708 4.1e-48 195.7 205 57.1
Sc14g0000190 Simmondsia chinensis HOM05D006257 ORTHO05D007708 2.2e-46 189.9 175 62.9
Manes.14G133800 Manihot esculenta HOM05D006257 ORTHO05D007708 1.0e-43 181.0 176 64.8
Aqoxy7G03671 Aquilegia oxysepala HOM05D006257 ORTHO05D007708 1.8e-40 170.2 199 52.3
Sed0003979 Sechium edule HOM05D006257 ORTHO05D007708 5.6e-37 158.7 160 63.8
Psat4g037320 Pisum sativum HOM05D006257 ORTHO05D007708 2.6e-34 149.8 182 53.3
BcaC03g16142 Brassica carinata HOM05D006257 ORTHO05D007708 1.7e-33 147.1 140 61.4
A02p24830 Brassica napus HOM05D006257 ORTHO05D007708 8.3e-33 144.8 128 61.7
BraA02t07471Z Brassica rapa HOM05D007780 ORTHO05D000140 9.2e-32 141.4 128 60.2
SMO111G0154 Selaginella moellendorffii HOM05D006257 ORTHO05D007708 9.2e-32 141.4 145 53.1
Mapoly0099s0035 Marchantia polymorpha HOM05D006257 ORTHO05D007708 1.7e-30 137.1 152 52.6
AagrBONN_evm.TU.Sc2ySwM_344.2604 Anthoceros agrestis HOM05D006257 ORTHO05D007708 2.2e-25 120.2 144 47.9
Pp3c8_15020 Physcomitrium patens HOM05D006257 ORTHO05D007708 2.4e-24 116.7 189 39.7
SEGI_32211 Sequoiadendron giganteum HOM05D006257 ORTHO05D007708 3.5e-23 112.8 104 56.7
C02p39320 Brassica napus HOM05D006257 ORTHO05D007708 1.2e-18 97.8 75 68.0
Pp3c24_6770 Physcomitrium patens HOM05D006257 ORTHO05D007708 6.4e-17 92.0 105 50.5
Mapoly0522s0001 Marchantia polymorpha HOM05D006257 ORTHO05D007708 8.3e-17 91.7 106 47.2
FAN19G1291 Fragaria x ananassa HOM05D006257 ORTHO05D007708 3.2e-16 89.7 100 53.0
BcaB05g23639 Brassica carinata HOM05D006257 ORTHO05D007708 1.3e-06 57.8 64 57.8
MCO01G764 Micromonas commoda HOM05D006257 ORTHO05D007708 3.0e-06 56.6 193 30.1
Cre06.g256250 Chlamydomonas reinhardtii HOM05D006257 ORTHO05D007708 3.9e-06 56.2 156 30.8


User provided reference genes

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