Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030936 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 2.7e-81 305.4 172 100.0
CSS0010041 Camellia sinensis var. sinensis HOM05D007514 ORTHO05D009469 7.8e-81 303.9 172 99.4
Sc16g0002120 Simmondsia chinensis HOM05D007514 ORTHO05D009469 7.6e-36 154.5 158 55.1
MSTRG.883 Avicennia marina HOM05D007514 ORTHO05D009469 8.4e-35 151.0 162 53.1
Nn6g32368 Nelumbo nucifera HOM05D007514 ORTHO05D009469 8.4e-35 151.0 103 69.9
Oeu059507.1 Olea europaea HOM05D007514 ORTHO05D009469 4.2e-34 148.7 106 68.9
Potri.005G115000 Populus trichocarpa HOM05D007514 ORTHO05D009469 5.5e-34 148.3 162 53.7
TWI09G1362 Tripterygium wilfordii HOM05D007514 ORTHO05D009469 9.3e-34 147.5 170 52.4
Migut.L00252 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.6e-33 146.7 163 49.1
Migut.L00394 Erythranthe guttata HOM05D007514 ORTHO05D009469 1.6e-33 146.7 163 49.1
Cc07_g10640 Coffea canephora HOM05D007514 ORTHO05D009469 3.5e-33 145.6 167 53.3
COL.COLO4_21918 Corchorus olitorius HOM05D007514 ORTHO05D009469 7.9e-33 144.4 109 67.9
Hma1.2p1_0743F.1_g211610 Hydrangea macrophylla HOM05D007514 ORTHO05D009469 1.0e-32 144.1 172 58.7
PGR119G2084 Punica granatum HOM05D007514 ORTHO05D009469 1.3e-32 143.7 113 66.4
Sabra05G0094100 Salix brachista HOM05D007514 ORTHO05D009469 1.3e-32 143.7 111 67.6
Duzib264G0291 Durio zibethinus HOM05D007514 ORTHO05D009469 1.8e-32 143.3 108 69.4
Ah.01g021120 Amaranthus hybridus HOM05D007514 ORTHO05D009469 3.0e-32 142.5 106 67.0
Thecc.01G019700 Theobroma cacao HOM05D007514 ORTHO05D009469 3.0e-32 142.5 112 65.2
Rhsim08G0034000 Rhododendron simsii HOM05D007514 ORTHO05D009469 2.5e-31 139.4 180 54.4
Lsat_1_v5_gn_3_74241 Lactuca sativa HOM05D007514 ORTHO05D009469 3.3e-31 139.0 105 66.7
AUR62011597 Chenopodium quinoa HOM05D007514 ORTHO05D009469 7.4e-31 137.9 108 63.0
Carub.0003s3210 Capsella rubella HOM05D007514 ORTHO05D009469 9.7e-31 137.5 105 63.8
AL3G51000 Arabidopsis lyrata HOM05D007514 ORTHO05D009469 1.6e-30 136.7 108 64.8
Thhalv10022884m.g Eutrema salsugineum HOM05D007514 ORTHO05D009469 2.2e-30 136.3 108 63.0
DCAR_016611 Daucus carota HOM05D007514 ORTHO05D009469 2.8e-30 136.0 165 47.9
Ciclev10026620m.g Citrus clementina HOM05D007514 ORTHO05D009469 3.7e-30 135.6 172 51.2
AT2G17972 Arabidopsis thaliana HOM05D007514 ORTHO05D009469 4.8e-30 135.2 108 63.9
A07p02710 Brassica napus HOM05D007514 ORTHO05D009469 4.8e-30 135.2 109 64.2
BraA07t28071Z Brassica rapa HOM05D007514 ORTHO05D009469 4.8e-30 135.2 109 64.2
Cpa.g.sc6.242 Carica papaya HOM05D007514 ORTHO05D009469 4.8e-30 135.2 109 60.6
Sp3g31390 Schrenkiella parvula HOM05D007514 ORTHO05D009469 4.8e-30 135.2 109 63.3
SGA_v2.0_scaffold234G43648 Striga asiatica HOM05D007514 ORTHO05D009469 4.8e-30 135.2 104 66.3
unitig_26.g10012 Utricularia gibba HOM05D007514 ORTHO05D009469 8.2e-30 134.4 157 56.7
BcaB03g16581 Brassica carinata HOM05D007514 ORTHO05D009469 1.1e-29 134.0 106 63.2
CARHR108460 Cardamine hirsuta HOM05D007514 ORTHO05D009469 1.1e-29 134.0 106 64.2
Gohir.A02G170200 Gossypium hirsutum HOM05D007514 ORTHO05D009469 1.1e-29 134.0 109 64.2
BcaC06g36349 Brassica carinata HOM05D007514 ORTHO05D009469 1.4e-29 133.7 109 63.3
C07p05010 Brassica napus HOM05D007514 ORTHO05D009469 1.4e-29 133.7 109 63.3
BolC7t40902H Brassica oleracea HOM05D007514 ORTHO05D009469 1.4e-29 133.7 109 63.3
Dinv33625 Davidia involucrata HOM05D007514 ORTHO05D009469 1.4e-29 133.7 152 56.6
Gohir.D03G009800 Gossypium hirsutum HOM05D007514 ORTHO05D009469 2.4e-29 132.9 185 53.0
PSO541G1849 Papaver somniferum HOM05D007514 ORTHO05D009469 2.4e-29 132.9 102 64.7
Aqoxy5G01772 Aquilegia oxysepala HOM05D007514 ORTHO05D009469 3.1e-29 132.5 167 47.9
PSO675G8043 Papaver somniferum HOM05D007514 ORTHO05D009469 5.3e-29 131.7 170 48.8
CiPaw.07G058000 Carya illinoinensis HOM05D007514 ORTHO05D009469 9.0e-29 131.0 152 52.6
TAR365G1204 Trochodendron aralioides HOM05D007514 ORTHO05D009469 1.2e-28 130.6 152 51.3
MBI05_g15346_MAGBIO Magnolia biondii HOM05D007514 ORTHO05D009469 2.0e-28 129.8 103 61.2
Aa31LG8G15140 Aethionema arabicum HOM05D007514 ORTHO05D009469 3.4e-28 129.0 105 61.0
MD02G1133200 Malus domestica HOM05D007514 ORTHO05D009469 3.4e-28 129.0 180 46.7
Manes.02G103801 Manihot esculenta HOM05D007514 ORTHO05D009469 3.4e-28 129.0 106 62.3
TAR365G0263 Trochodendron aralioides HOM05D007514 ORTHO05D009469 3.4e-28 129.0 152 50.7
Gorai.003G010100 Gossypium raimondii HOM05D007514 ORTHO05D009469 5.9e-28 128.3 188 52.1
Prupe.7G167500 Prunus persica HOM05D007514 ORTHO05D009469 5.9e-28 128.3 112 61.6
Sed0026037 Sechium edule HOM05D007514 ORTHO05D009469 1.3e-27 127.1 106 60.4
VMungo0251G0111 Vigna mungo HOM05D007514 ORTHO05D009469 1.7e-27 126.7 107 57.0
PGSC0003DMG401003636 Solanum tuberosum HOM05D007514 ORTHO05D009469 2.2e-27 126.3 108 61.1
THA.LOC104819752 Tarenaya hassleriana HOM05D007514 ORTHO05D009469 6.5e-27 124.8 170 45.9
Phvul.003G262200 Phaseolus vulgaris HOM05D007514 ORTHO05D009469 8.5e-27 124.4 106 56.6
Glyma.16G128900 Glycine max HOM05D007514 ORTHO05D009469 1.4e-26 123.6 109 60.6
Lj2P467T19 Lonicera japonica HOM05D007514 ORTHO05D009469 2.5e-26 122.9 90 64.4
Cfa006967 Carpinus fangiana HOM05D007514 ORTHO05D009469 5.5e-26 121.7 83 71.1
QL06p032616 Quercus lobata HOM05D007514 ORTHO05D009469 7.2e-26 121.3 105 61.0
CsaV3_6G047030 Cucumis sativus L. HOM05D007514 ORTHO05D009469 9.3e-26 120.9 84 67.9
Atru.chr3.793 Acer truncatum HOM05D007514 ORTHO05D009469 1.2e-25 120.6 69 81.2
Haze_03771 Corylus avellana HOM05D007514 ORTHO05D009469 2.1e-25 119.8 83 69.9
ClCG01G020240 Citrullus lanatus HOM05D007514 ORTHO05D009469 3.6e-25 119.0 86 67.4
MELO3C007896.2 Cucumis melo HOM05D007514 ORTHO05D009469 3.6e-25 119.0 84 67.9
FAN23G2896 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.1e-25 118.2 68 80.9
FAN26G2491 Fragaria x ananassa HOM05D007514 ORTHO05D009469 6.1e-25 118.2 68 80.9
Glyma.02G048800 Glycine max HOM05D007514 ORTHO05D009469 1.0e-24 117.5 100 60.0
Ca_22373_v3 Cicer arietinum L. HOM05D007514 ORTHO05D009469 1.3e-24 117.1 162 45.7
FvH4_1g11940 Fragaria vesca HOM05D007514 ORTHO05D009469 1.3e-24 117.1 82 68.3
FAN19G0235 Fragaria x ananassa HOM05D007514 ORTHO05D009469 1.3e-24 117.1 82 68.3
arahy.Tifrunner.gnm1.ann1.EYR4CZ Arachis hypogaea HOM05D007514 ORTHO05D009469 1.8e-24 116.7 68 76.5
arahy.Tifrunner.gnm1.ann1.JXSY0Y Arachis hypogaea HOM05D007514 ORTHO05D009469 1.8e-24 116.7 68 76.5
Lj4g0013490 Lotus japonicus HOM05D007514 ORTHO05D009469 2.3e-24 116.3 68 77.9
Lalb_Chr05g0229901 Lupinus albus HOM05D007514 ORTHO05D009469 3.9e-24 115.5 93 61.3
EL10Ac9g21968 Beta vulgaris HOM05D007514 ORTHO05D009469 6.7e-24 114.8 68 75.0
Nitab4.5_0006286g0070 Nicotiana tabacum HOM05D007514 ORTHO05D009469 6.7e-24 114.8 68 77.9
Duzib147G0981 Durio zibethinus HOM05D007514 ORTHO05D009469 8.7e-24 114.4 99 58.6
Sopen02g028770 Solanum pennellii HOM05D007514 ORTHO05D009469 1.1e-23 114.0 69 76.8
CANSAT01G2848 Cannabis sativa HOM05D007514 ORTHO05D009469 1.5e-23 113.6 85 64.7
AagrBONN_evm.TU.Sc2ySwM_344.4071 Anthoceros agrestis HOM05D007514 ORTHO05D009469 1.9e-23 113.2 100 56.0
Os06g0715200 Oryza sativa ssp. japonica HOM05D007514 ORTHO05D009469 5.7e-23 111.7 67 73.1
Zm00001eb228020 Zea mays HOM05D007514 ORTHO05D009469 5.7e-23 111.7 73 67.1
HPP92_025365 Vanilla planifolia HOM05D007514 ORTHO05D009469 9.7e-23 110.9 103 56.3
Nitab4.5_0001959g0010 Nicotiana tabacum HOM05D007514 ORTHO05D009469 1.7e-22 110.2 175 42.9
TPR.G30050 Trifolium pratense HOM05D007514 ORTHO05D009469 2.2e-22 109.8 97 58.8
Peaxi162Scf00083g00065 Petunia axillaris HOM05D007514 ORTHO05D009469 3.7e-22 109.0 153 47.7
Medtr8g075960 Medicago truncatula HOM05D007514 ORTHO05D009469 3.1e-21 105.9 90 60.0
Psat4g099040 Pisum sativum HOM05D007514 ORTHO05D009469 2.0e-20 103.2 111 50.5
FAN28G1094 Fragaria x ananassa HOM05D007514 ORTHO05D009469 5.9e-20 101.7 93 55.9
SMO353G0320 Selaginella moellendorffii HOM05D007514 ORTHO05D009469 2.2e-19 99.8 102 50.0
arahy.Tifrunner.gnm1.ann1.KXHU4R Arachis hypogaea HOM05D007514 ORTHO05D009469 2.9e-19 99.4 103 55.3
CAN.G66.6 Capsicum annuum HOM05D007514 ORTHO05D009469 8.5e-19 97.8 81 64.2
Pp3c15_14110 Physcomitrium patens HOM05D007514 ORTHO05D009469 1.4e-18 97.1 98 51.0
SEGI_16775 Sequoiadendron giganteum HOM05D007514 ORTHO05D009469 3.2e-18 95.9 87 55.2
Mapoly0011s0103 Marchantia polymorpha HOM05D007514 ORTHO05D009469 3.9e-16 89.0 66 62.1
Cre05.g245102 Chlamydomonas reinhardtii HOM05D007514 ORTHO05D009469 1.2e-12 77.4 65 52.3
PRCOL_00005620 Prasinoderma coloniale HOM05D007514 ORTHO05D009469 8.2e-06 54.7 55 45.5


User provided reference genes

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