Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030910 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 1.9e-77 292.4 140 100.0
Dinv10948 Davidia involucrata HOM05D000159 ORTHO05D000148 6.0e-23 111.3 101 60.4
CSS0049510 Camellia sinensis var. sinensis HOM05D000159 ORTHO05D000148 5.1e-22 108.2 94 62.8
Dinv24868 Davidia involucrata HOM05D000159 ORTHO05D000148 2.5e-21 105.9 103 54.4
Actinidia30641 Actinidia chinensis HOM05D000159 ORTHO05D000148 6.2e-20 101.3 97 57.7
Rhsim12G0025200 Rhododendron simsii HOM05D000159 ORTHO05D000148 4.5e-18 95.1 98 55.1
vmacro01056 Vaccinium macrocarpon HOM05D000159 ORTHO05D000148 2.9e-17 92.4 111 51.4
Manes.13G011000 Manihot esculenta HOM05D000159 ORTHO05D000148 1.1e-16 90.5 100 47.0
Manes.12G010200 Manihot esculenta HOM05D000159 ORTHO05D000148 1.8e-14 83.2 104 44.2
Oeu006523.1 Olea europaea HOM05D000159 ORTHO05D000148 2.3e-14 82.8 115 46.1
GSVIVG01010496001 Vitis vinifera HOM05D000159 ORTHO05D000148 3.0e-14 82.4 104 47.1
Nitab4.5_0000861g0050 Nicotiana tabacum HOM05D000159 ORTHO05D000148 1.9e-13 79.7 104 46.2
Nn8g41238 Nelumbo nucifera HOM05D000159 ORTHO05D000148 1.3e-12 77.0 97 48.5
Nitab4.5_0003900g0020 Nicotiana tabacum HOM05D000159 ORTHO05D000148 2.1e-12 76.3 103 44.7
Potri.003G172600 Populus trichocarpa HOM05D000159 ORTHO05D000148 2.8e-12 75.9 115 39.1
TWI36G0394 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 6.3e-12 74.7 114 43.0
TAR383G0303 Trochodendron aralioides HOM05D000159 ORTHO05D000148 8.2e-12 74.3 118 43.2
TWI18G0107 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 2.4e-11 72.8 113 41.6
TAR626G0586 Trochodendron aralioides HOM05D000159 ORTHO05D000148 2.4e-11 72.8 104 45.2
ECA233G4062 Erigeron canadensis HOM05D000159 ORTHO05D000148 4.1e-11 72.0 94 48.9
Potri.001G055900 Populus trichocarpa HOM05D000159 ORTHO05D000148 4.1e-11 72.0 87 40.2
Sabra03G0126300 Salix brachista HOM05D000159 ORTHO05D000148 4.1e-11 72.0 100 42.0
Haze_12428 Corylus avellana HOM05D000159 ORTHO05D000148 5.3e-11 71.6 102 45.1
Nn5g26966 Nelumbo nucifera HOM05D000159 ORTHO05D000148 5.3e-11 71.6 105 46.7
QL03p052489 Quercus lobata HOM05D000159 ORTHO05D000148 5.3e-11 71.6 98 44.9
Cc11_g16990 Coffea canephora HOM05D000159 ORTHO05D000148 6.9e-11 71.2 97 48.5
CiPaw.05G108800 Carya illinoinensis HOM05D000159 ORTHO05D000148 9.0e-11 70.9 106 40.6
RcHm_v2.0_Chr4g0430121 Rosa chinensis HOM05D000159 ORTHO05D000148 1.5e-10 70.1 105 45.7
FAN07G1077 Fragaria x ananassa HOM05D000159 ORTHO05D000148 2.6e-10 69.3 105 44.8
PGSC0003DMG400034310 Solanum tuberosum HOM05D000159 ORTHO05D000148 7.6e-10 67.8 105 44.8
TWI75G1778 Tripterygium wilfordii HOM05D000159 ORTHO05D000148 7.6e-10 67.8 113 41.6
FAN17G2684 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.7e-09 66.6 105 43.8
MSTRG.8010 Avicennia marina HOM05D000159 ORTHO05D000148 2.9e-09 65.9 116 39.7
Dinv12626 Davidia involucrata HOM05D000159 ORTHO05D000148 2.9e-09 65.9 104 42.3
Peaxi162Scf00128g01331 Petunia axillaris HOM05D000159 ORTHO05D000148 2.9e-09 65.9 103 39.8
FvH4_4g23650 Fragaria vesca HOM05D000159 ORTHO05D000148 6.5e-09 64.7 105 43.8
FAN12G2716 Fragaria x ananassa HOM05D000159 ORTHO05D000148 6.5e-09 64.7 105 43.8
MD13G1120300 Malus domestica HOM05D000159 ORTHO05D000148 6.5e-09 64.7 100 42.0
Atru.chr11.2335 Acer truncatum HOM05D000159 ORTHO05D000148 8.5e-09 64.3 103 40.8
MD16G1120300 Malus domestica HOM05D000159 ORTHO05D000148 8.5e-09 64.3 104 41.3
FAN22G1786 Fragaria x ananassa HOM05D000159 ORTHO05D000148 1.1e-08 63.9 105 42.9
Oeu004449.3 Olea europaea HOM05D000159 ORTHO05D000148 1.1e-08 63.9 105 39.0
Aqoxy7G02608 Aquilegia oxysepala HOM05D000159 ORTHO05D000148 1.4e-08 63.5 97 41.2
Sabra01G0040300 Salix brachista HOM05D000159 ORTHO05D000148 1.9e-08 63.2 87 37.9
CAN.G163.8 Capsicum annuum HOM05D000159 ORTHO05D000148 3.2e-08 62.4 92 41.3
Cpa.g.sc43.63 Carica papaya HOM05D000159 ORTHO05D000148 4.2e-08 62.0 69 49.3
Hma1.2p1_0275F.1_g110710 Hydrangea macrophylla HOM05D000159 ORTHO05D000148 4.2e-08 62.0 108 43.5
MBI16_g00826_MAGBIO Magnolia biondii HOM05D000159 ORTHO05D000148 4.2e-08 62.0 100 42.0
CANSAT01G1239 Cannabis sativa HOM05D000159 ORTHO05D000148 1.2e-07 60.5 105 38.1
Solyc05g015510.3 Solanum lycopersicum HOM05D000159 ORTHO05D000148 1.2e-07 60.5 102 41.2
Sopen05g010900 Solanum pennellii HOM05D000159 ORTHO05D000148 1.2e-07 60.5 102 41.2
Duzib268G0026 Durio zibethinus HOM05D000159 ORTHO05D000148 1.6e-07 60.1 104 37.5
Prupe.1G224900 Prunus persica HOM05D000159 ORTHO05D000148 1.6e-07 60.1 106 41.5
Gorai.002G182700 Gossypium raimondii HOM05D000159 ORTHO05D000148 2.1e-07 59.7 103 35.0
HanXRQChr17g0569001 Helianthus annuus HOM05D000159 ORTHO05D000148 3.6e-07 58.9 102 41.2
Ciclev10031391m.g Citrus clementina HOM05D000159 ORTHO05D000148 4.6e-07 58.5 104 35.6
MSTRG.499 Avicennia marina HOM05D000159 ORTHO05D000148 7.9e-07 57.8 113 38.9
COL.COLO4_20413 Corchorus olitorius HOM05D000159 ORTHO05D000148 1.8e-06 56.6 104 37.5
Oeu003329.2 Olea europaea HOM05D000159 ORTHO05D000148 1.8e-06 56.6 104 35.6
Potri.018G149900 Populus trichocarpa HOM05D000159 ORTHO05D000148 1.8e-06 56.6 89 42.7
Actinidia02545 Actinidia chinensis HOM05D000159 ORTHO05D000148 3.0e-06 55.8 98 35.7
Lalb_Chr12g0206091 Lupinus albus HOM05D000159 ORTHO05D000148 3.0e-06 55.8 102 36.3
Cfa012885 Carpinus fangiana HOM05D000159 ORTHO05D000148 5.1e-06 55.1 98 39.8
Gohir.A01G154600 Gossypium hirsutum HOM05D000159 ORTHO05D000148 5.1e-06 55.1 103 34.0


User provided reference genes

Program Settings