Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030883 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.5e-208 728.0 364 100.0
CSS0003173 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 4.7e-184 647.9 390 87.2
CSS0031560 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 5.0e-154 548.1 405 74.6
CSS0025326 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 3.0e-138 495.7 374 74.1
CSS0008548 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.4e-135 486.9 411 67.9
CSS0020440 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 2.2e-133 479.6 364 73.4
CSS0037716 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.1e-127 460.7 403 66.5
CSS0043256 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.1e-127 460.7 372 70.2
CSS0034194 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 6.8e-127 458.0 403 66.3
Lj6A780T47 Lonicera japonica HOM05D004724 ORTHO05D005734 6.8e-127 458.0 405 61.2
Actinidia28645 Actinidia chinensis HOM05D004724 ORTHO05D005734 4.4e-126 455.3 405 62.7
CSS0040633 Camellia sinensis var. sinensis HOM05D004724 ORTHO05D005734 1.3e-122 443.7 381 66.4
Hma1.2p1_0354F.1_g133420 Hydrangea macrophylla HOM05D004724 ORTHO05D005734 2.9e-117 426.0 405 58.8
Nn3g17424 Nelumbo nucifera HOM05D004724 ORTHO05D005734 8.4e-117 424.5 403 58.6
GSVIVG01012211001 Vitis vinifera HOM05D004724 ORTHO05D005734 8.4e-117 424.5 405 57.5
Nn4g23396 Nelumbo nucifera HOM05D004724 ORTHO05D005734 7.1e-116 421.4 401 58.6
MSTRG.13448 Avicennia marina HOM05D004724 ORTHO05D005734 6.0e-115 418.3 405 57.8
QL03p072107 Quercus lobata HOM05D004724 ORTHO05D005734 7.8e-115 417.9 403 57.3
Migut.E00049 Erythranthe guttata HOM05D004724 ORTHO05D005734 1.5e-113 413.7 405 55.6
QL03p072513 Quercus lobata HOM05D004724 ORTHO05D005734 1.9e-113 413.3 403 56.6
HanXRQChr08g0211831 Helianthus annuus HOM05D004724 ORTHO05D005734 1.6e-112 410.2 405 55.6
CiPaw.05G125900 Carya illinoinensis HOM05D004724 ORTHO05D005734 3.6e-112 409.1 403 56.3
vmacro16381 Vaccinium macrocarpon HOM05D004724 ORTHO05D005734 5.3e-111 405.2 502 50.0
TAR622G0524 Trochodendron aralioides HOM05D004724 ORTHO05D005734 2.9e-109 399.4 377 58.6
Sc04g0007630 Simmondsia chinensis HOM05D004724 ORTHO05D005734 4.9e-109 398.7 405 55.1
TAR374G1337 Trochodendron aralioides HOM05D004724 ORTHO05D005734 4.9e-109 398.7 377 58.1
THA.LOC104822013 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 8.4e-109 397.9 403 54.6
Dinv34076 Davidia involucrata HOM05D004724 ORTHO05D005734 3.2e-108 396.0 357 61.1
MD13G1063400 Malus domestica HOM05D004724 ORTHO05D005734 5.4e-108 395.2 405 54.8
Dinv15029 Davidia involucrata HOM05D004724 ORTHO05D005734 2.1e-107 393.3 357 60.8
Thecc.02G332500 Theobroma cacao HOM05D004724 ORTHO05D005734 2.1e-107 393.3 403 55.3
Eucgr.B03160 Eucalyptus grandis HOM05D004724 ORTHO05D005734 4.6e-107 392.1 405 55.1
MD16G1061800 Malus domestica HOM05D004724 ORTHO05D005734 1.0e-106 391.0 405 55.6
Gorai.005G145100 Gossypium raimondii HOM05D004724 ORTHO05D005734 7.3e-105 384.8 403 54.1
Nitab4.5_0000231g0420 Nicotiana tabacum HOM05D004724 ORTHO05D005734 7.3e-105 384.8 403 52.1
TWI31G1115 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 9.6e-105 384.4 403 53.6
Nitab4.5_0004171g0040 Nicotiana tabacum HOM05D004724 ORTHO05D005734 1.3e-104 384.0 403 52.4
Gohir.D02G129300 Gossypium hirsutum HOM05D004724 ORTHO05D005734 1.6e-104 383.6 403 53.8
PGR102G0250 Punica granatum HOM05D004724 ORTHO05D005734 1.6e-104 383.6 403 53.1
Gohir.A03G104200 Gossypium hirsutum HOM05D004724 ORTHO05D005734 2.1e-104 383.3 403 53.6
TWI79G1393 Tripterygium wilfordii HOM05D004724 ORTHO05D005734 2.1e-104 383.3 403 54.6
Lsat_1_v5_gn_8_47681 Lactuca sativa HOM05D004724 ORTHO05D005734 6.2e-104 381.7 378 55.0
MBI16_g13587_MAGBIO Magnolia biondii HOM05D004724 ORTHO05D005734 1.1e-103 380.9 380 56.1
Oeu048146.1 Olea europaea HOM05D004724 ORTHO05D005734 2.4e-103 379.8 406 55.2
ECA233G5398 Erigeron canadensis HOM05D004724 ORTHO05D005734 5.3e-103 378.6 381 53.5
Sopen05g007210 Solanum pennellii HOM05D004724 ORTHO05D005734 1.2e-102 377.5 404 51.7
PGSC0003DMG400028320 Solanum tuberosum HOM05D004724 ORTHO05D005734 3.4e-102 375.9 404 51.5
SalBow2G3108 Salvia bowleyana HOM05D004724 ORTHO05D005734 4.5e-102 375.6 425 50.1
Lalb_Chr10g0098781 Lupinus albus HOM05D004724 ORTHO05D005734 2.2e-101 373.2 405 51.9
RcHm_v2.0_Chr4g0438491 Rosa chinensis HOM05D004724 ORTHO05D005734 2.2e-101 373.2 405 52.1
CAN.G616.33 Capsicum annuum HOM05D004724 ORTHO05D005734 2.9e-101 372.9 403 50.4
SGA_v2.0_scaffold16G07777 Striga asiatica HOM05D004724 ORTHO05D005734 6.4e-101 371.7 405 51.6
Aa31LG7G8630 Aethionema arabicum HOM05D004724 ORTHO05D005734 5.4e-100 368.6 400 51.2
Peaxi162Scf00175g00020 Petunia axillaris HOM05D004724 ORTHO05D005734 1.6e-99 367.1 403 51.1
Atru.chr11.1649 Acer truncatum HOM05D004724 ORTHO05D005734 2.1e-99 366.7 383 52.7
MELO3C011422.2 Cucumis melo HOM05D004724 ORTHO05D005734 3.5e-99 365.9 403 52.9
Cc11_g12080 Coffea canephora HOM05D004724 ORTHO05D005734 5.1e-98 362.1 384 52.1
CsaV3_6G033660 Cucumis sativus L. HOM05D004724 ORTHO05D005734 5.1e-98 362.1 403 52.1
Cfa008886 Carpinus fangiana HOM05D004724 ORTHO05D005734 1.1e-97 360.9 375 53.1
Manes.01G028400 Manihot esculenta HOM05D004724 ORTHO05D005734 2.5e-97 359.8 403 48.6
CARHR025500 Cardamine hirsuta HOM05D004724 ORTHO05D005734 3.3e-97 359.4 403 49.9
PSO017G2003 Papaver somniferum HOM05D004724 ORTHO05D005734 1.6e-96 357.1 402 50.0
PSO478G4140 Papaver somniferum HOM05D004724 ORTHO05D005734 1.6e-96 357.1 402 50.2
AT1G26460 Arabidopsis thaliana HOM05D004724 ORTHO05D005734 2.8e-96 356.3 400 49.5
Rhsim12G0135900 Rhododendron simsii HOM05D004724 ORTHO05D005734 2.8e-96 356.3 320 62.5
AUR62007926 Chenopodium quinoa HOM05D004724 ORTHO05D005734 3.7e-96 355.9 403 51.4
ClCG08G010390 Citrullus lanatus HOM05D004724 ORTHO05D005734 3.7e-96 355.9 380 52.4
THA.LOC104805036 Tarenaya hassleriana HOM05D004724 ORTHO05D005734 6.2e-96 355.1 380 51.1
TPR.G24471 Trifolium pratense HOM05D004724 ORTHO05D005734 6.2e-96 355.1 400 51.0
AUR62003111 Chenopodium quinoa HOM05D004724 ORTHO05D005734 8.1e-96 354.8 403 50.9
Sed0014019 Sechium edule HOM05D004724 ORTHO05D005734 8.1e-96 354.8 377 52.3
Ciclev10031249m.g Citrus clementina HOM05D004724 ORTHO05D005734 1.1e-95 354.4 380 52.4
Haze_11916 Corylus avellana HOM05D004724 ORTHO05D005734 1.4e-95 354.0 389 51.4
Glyma.01G058200 Glycine max HOM05D004724 ORTHO05D005734 1.8e-95 353.6 405 49.6
SalBow8G1172 Salvia bowleyana HOM05D004724 ORTHO05D005734 1.8e-95 353.6 443 47.6
EL10Ac6g14982 Beta vulgaris HOM05D004724 ORTHO05D005734 2.4e-95 353.2 404 51.2
BolC5t31188H Brassica oleracea HOM05D004724 ORTHO05D005734 3.1e-95 352.8 400 49.2
DCAR_027471 Daucus carota HOM05D004724 ORTHO05D005734 4.0e-95 352.4 405 49.6
ATR0064G103 Amborella trichopoda HOM05D004724 ORTHO05D005734 5.3e-95 352.1 378 51.6
Glyma.02G116000 Glycine max HOM05D004724 ORTHO05D005734 3.4e-94 349.4 401 49.6
Ca_04959_v3 Cicer arietinum L. HOM05D004724 ORTHO05D005734 5.8e-94 348.6 400 50.8
Potri.010G159100 Populus trichocarpa HOM05D004724 ORTHO05D005734 5.8e-94 348.6 408 50.0
Prupe.1G286100 Prunus persica HOM05D004724 ORTHO05D005734 5.8e-94 348.6 381 51.2
Lj2g0005374 Lotus japonicus HOM05D004724 ORTHO05D005734 1.7e-93 347.1 405 47.7
Medtr5g044270 Medicago truncatula HOM05D004724 ORTHO05D005734 4.9e-93 345.5 401 49.4
FvH4_4g30160 Fragaria vesca HOM05D004724 ORTHO05D005734 3.2e-92 342.8 406 49.0
AL1G39280 Arabidopsis lyrata HOM05D004724 ORTHO05D005734 4.2e-92 342.4 378 50.0
Carub.0001s2456 Capsella rubella HOM05D004724 ORTHO05D005734 9.3e-92 341.3 377 49.9
COL.COLO4_27896 Corchorus olitorius HOM05D004724 ORTHO05D005734 9.3e-92 341.3 373 52.0
CANSAT64G0483 Cannabis sativa HOM05D004724 ORTHO05D005734 1.2e-91 340.9 380 52.1
Thhalv10007071m.g Eutrema salsugineum HOM05D004724 ORTHO05D005734 1.2e-91 340.9 374 51.1
BraA09t39487Z Brassica rapa HOM05D004724 ORTHO05D005734 1.0e-90 337.8 382 49.0
A09p39880 Brassica napus HOM05D004724 ORTHO05D005734 1.8e-90 337.0 382 49.0
C05p24540 Brassica napus HOM05D004724 ORTHO05D005734 3.0e-90 336.3 382 48.7
FAN12G2645 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.3e-88 330.9 386 50.0
FAN22G1297 Fragaria x ananassa HOM05D004724 ORTHO05D005734 4.8e-88 328.9 395 49.1
Migut.L01196 Erythranthe guttata HOM05D004724 ORTHO05D005734 7.6e-86 321.6 405 48.1
HPP92_009526 Vanilla planifolia HOM05D004724 ORTHO05D005734 2.2e-85 320.1 374 49.7
HPP92_009555 Vanilla planifolia HOM05D004724 ORTHO05D005734 2.9e-85 319.7 374 49.7
Solyc05g012390.4 Solanum lycopersicum HOM05D004724 ORTHO05D005734 1.9e-84 317.0 324 52.2
Sabra10G0120800 Salix brachista HOM05D004724 ORTHO05D005734 1.2e-83 314.3 409 46.5
DCAR_027465 Daucus carota HOM05D004724 ORTHO05D005734 3.5e-83 312.8 337 52.2
CiPaw.06G092100 Carya illinoinensis HOM05D004724 ORTHO05D005734 6.1e-83 312.0 406 46.8
Os07g0599000 Oryza sativa ssp. japonica HOM05D004724 ORTHO05D005734 1.6e-80 303.9 373 47.7
arahy.Tifrunner.gnm1.ann1.06XI8G Arachis hypogaea HOM05D004724 ORTHO05D005734 2.2e-80 303.5 411 46.0
Zm00001eb108470 Zea mays HOM05D004724 ORTHO05D005734 2.2e-80 303.5 376 44.9
Hund25184 Selenicereus undatus HOM05D004724 ORTHO05D005734 1.4e-79 300.8 385 47.0
arahy.Tifrunner.gnm1.ann1.CTA0UQ Arachis hypogaea HOM05D004724 ORTHO05D005734 3.1e-79 299.7 411 45.3
FAN07G2095 Fragaria x ananassa HOM05D004724 ORTHO05D005734 1.2e-78 297.7 390 46.7
Psat2g129640 Pisum sativum HOM05D004724 ORTHO05D005734 4.5e-78 295.8 295 56.6
Zm00001eb326730 Zea mays HOM05D004724 ORTHO05D005734 1.4e-76 290.8 334 47.6
FAN17G2607 Fragaria x ananassa HOM05D004724 ORTHO05D005734 7.2e-76 288.5 401 45.1
Phvul.003G043100 Phaseolus vulgaris HOM05D004724 ORTHO05D005734 1.8e-74 283.9 411 44.0
CDE04G2698 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 6.7e-74 282.0 387 42.6
Aqoxy3G03611 Aquilegia oxysepala HOM05D004724 ORTHO05D005734 9.7e-73 278.1 385 42.9
SGA_v2.0_scaffold287G47167 Striga asiatica HOM05D004724 ORTHO05D005734 1.1e-71 274.6 294 52.4
VMungo1215G0095 Vigna mungo HOM05D004724 ORTHO05D005734 8.5e-69 265.0 411 42.6
SHI32884 Sapria himalayana HOM05D004724 ORTHO05D005734 5.5e-52 209.1 227 51.1
Cpa.g.sc1.117 Carica papaya HOM05D004724 ORTHO05D005734 7.2e-52 208.8 205 56.1
EL10Ac5g12464 Beta vulgaris HOM05D004724 ORTHO05D005734 1.3e-48 198.0 240 49.2
SEGI_02789 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 1.5e-44 184.5 228 48.2
GSVIVG01028487001 Vitis vinifera HOM05D004724 ORTHO05D005734 3.0e-42 176.8 216 47.2
GSVIVG01021735001 Vitis vinifera HOM05D004724 ORTHO05D005734 5.2e-42 176.0 216 47.7
SHI32782 Sapria himalayana HOM05D004724 ORTHO05D005734 7.7e-38 162.2 168 53.0
Mapoly0002s0313 Marchantia polymorpha HOM05D004724 ORTHO05D005734 1.3e-37 161.4 355 32.1
AagrBONN_evm.TU.Sc2ySwM_117.2858 Anthoceros agrestis HOM05D004724 ORTHO05D005734 1.7e-37 161.0 354 32.2
Ah.02g126900 Amaranthus hybridus HOM05D004724 ORTHO05D005734 1.1e-36 158.3 211 46.0
Actinidia32302 Actinidia chinensis HOM05D004724 ORTHO05D005734 1.4e-31 141.4 137 56.9
CDE07G1937 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 9.2e-31 138.7 202 40.6
Pp3c1_28760 Physcomitrium patens HOM05D004724 ORTHO05D005734 6.8e-26 122.5 260 31.2
SHI32882 Sapria himalayana HOM05D004724 ORTHO05D005734 6.8e-26 122.5 167 45.5
Medtr6g024415 Medicago truncatula HOM05D004724 ORTHO05D005734 1.0e-21 108.6 108 54.6
Nitab4.5_0011966g0020 Nicotiana tabacum HOM05D004724 ORTHO05D005734 3.0e-21 107.1 143 45.5
Pp3c14_20030 Physcomitrium patens HOM05D004724 ORTHO05D005734 3.0e-21 107.1 357 27.7
Actinidia32300 Actinidia chinensis HOM05D004724 ORTHO05D007268 4.7e-19 99.8 117 50.4
CBR_g55790 Chara braunii HOM05D004724 ORTHO05D005734 1.2e-17 95.1 302 25.8
GSVIVG01009940001 Vitis vinifera HOM05D004724 ORTHO05D005734 3.7e-16 90.1 90 50.0
Ah.02g126910 Amaranthus hybridus HOM05D004724 ORTHO05D005734 6.0e-14 82.8 94 44.7
Actinidia32301 Actinidia chinensis HOM05D004724 ORTHO05D005734 2.3e-13 80.9 104 44.2
SEGI_03319 Sequoiadendron giganteum HOM05D004724 ORTHO05D005734 1.9e-12 77.8 94 40.4
C07p19370 Brassica napus HOM05D004724 ORTHO05D005734 8.9e-10 68.9 75 45.3
A07p12930 Brassica napus HOM05D004724 ORTHO05D005734 4.9e-08 63.2 68 47.1
BraA07t29066Z Brassica rapa HOM05D004724 ORTHO05D005734 4.9e-08 63.2 68 47.1
BolC7t42456H Brassica oleracea HOM05D004724 ORTHO05D005734 5.4e-07 59.7 68 45.6
CDE07G0543 Ceratophyllum demersum HOM05D004724 ORTHO05D005734 4.6e-06 56.6 49 53.1


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