Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030836 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-27 124.8 62 100.0
CSS0024899 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.9e-17 91.3 62 75.8
TAR332G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000001 1.1e-16 89.4 57 78.9
Potri.004G127101 Populus trichocarpa HOM05D000002 ORTHO05D000047 4.6e-15 84.0 57 70.2
Oeu025453.1 Olea europaea HOM05D000002 ORTHO05D000047 6.0e-15 83.6 57 70.2
Duzib168G0509 Durio zibethinus HOM05D000002 ORTHO05D000047 8.6e-14 79.7 58 62.1
Potri.001G247404 Populus trichocarpa HOM05D000002 ORTHO05D000047 1.5e-13 79.0 57 63.2
Hma1.2p1_0147F.1_g065860 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.9e-13 78.6 57 66.7
Duzib093G0036 Durio zibethinus HOM05D004195 ORTHO05D005309 3.3e-13 77.8 57 61.4
Duzib151G0310 Durio zibethinus HOM05D000002 ORTHO05D000047 3.3e-13 77.8 57 61.4
Duzib168G2283 Durio zibethinus HOM05D000002 ORTHO05D000047 3.3e-13 77.8 57 61.4
Duzib187G0946 Durio zibethinus HOM05D000002 ORTHO05D000047 3.3e-13 77.8 57 61.4
Duzib063G0004 Durio zibethinus HOM05D000002 ORTHO05D000047 9.5e-13 76.3 57 59.6
Duzib248G1273 Durio zibethinus HOM05D000002 ORTHO05D000047 9.5e-13 76.3 57 59.6
CSS0015246 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.8e-12 74.7 57 61.4
Manes.10G096950 Manihot esculenta HOM05D000002 ORTHO05D000047 2.3e-11 71.6 56 55.4
VMungo1383G3030 Vigna mungo HOM05D000002 ORTHO05D019586 6.8e-11 70.1 56 50.0
Oeu046725.1 Olea europaea HOM05D000002 ORTHO05D000047 2.6e-10 68.2 57 54.4
VMungo0720G1249 Vigna mungo HOM05D000002 ORTHO05D000047 3.4e-10 67.8 57 49.1
Cpa.g.sc164.9 Carica papaya HOM05D000002 ORTHO05D000047 4.4e-10 67.4 56 51.8
Phvul.009G096700 Phaseolus vulgaris HOM05D000002 ORTHO05D000047 4.4e-10 67.4 56 48.2
TPR.G38964 Trifolium pratense HOM05D000002 ORTHO05D000047 7.5e-10 66.6 56 46.4
Ca_04068_v3 Cicer arietinum L. HOM05D000002 ORTHO05D000047 1.3e-09 65.9 58 44.8
Eucgr.C01993 Eucalyptus grandis HOM05D000002 ORTHO05D000047 1.3e-09 65.9 53 50.9
VMungo1215G3020 Vigna mungo HOM05D000002 ORTHO05D000001 1.7e-09 65.5 56 46.4
HPP92_005717 Vanilla planifolia HOM05D000002 ORTHO05D000047 2.2e-09 65.1 57 50.9
Eucgr.H02766 Eucalyptus grandis HOM05D000002 ORTHO05D000047 2.9e-09 64.7 57 56.1
HPP92_028162 Vanilla planifolia HOM05D005168 ORTHO05D006358 2.9e-09 64.7 57 49.1
VMungo1383G2495 Vigna mungo HOM05D002560 ORTHO05D003782 3.7e-09 64.3 56 46.4
HPP92_021418 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.9e-09 63.9 57 49.1
HPP92_024459 Vanilla planifolia HOM05D000002 ORTHO05D000047 4.9e-09 63.9 57 49.1
TAR575G0002 Trochodendron aralioides HOM05D000002 ORTHO05D000047 6.4e-09 63.5 56 50.0
HPP92_005074 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.1e-08 62.8 57 49.1
Oeu041660.4 Olea europaea HOM05D000002 ORTHO05D000047 1.4e-08 62.4 56 46.4
HPP92_022694 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.4e-08 62.4 60 45.0
HPP92_021869 Vanilla planifolia HOM05D000002 ORTHO05D000047 1.9e-08 62.0 60 45.0
GSVIVG01029816001 Vitis vinifera HOM05D000168 ORTHO05D000047 4.1e-08 60.8 56 50.0
HPP92_025431 Vanilla planifolia HOM05D000002 ORTHO05D000047 5.4e-08 60.5 55 47.3
VMungo0540G1667 Vigna mungo HOM05D002022 ORTHO05D002056 5.4e-08 60.5 51 45.1
CSS0030944 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 7.1e-08 60.1 55 49.1
CSS0004437 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 9.2e-08 59.7 55 49.1
Prupe.3G076700 Prunus persica HOM05D000002 ORTHO05D000047 9.2e-08 59.7 53 50.9
Prupe.4G181800 Prunus persica HOM05D000002 ORTHO05D000047 9.2e-08 59.7 53 50.9
VMungo1080G1535 Vigna mungo HOM05D005363 ORTHO05D006607 1.2e-07 59.3 55 50.9
Hma1.2p1_0053F.1_g030910 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.6e-07 58.9 53 54.7
Prupe.6G115900 Prunus persica HOM05D000002 ORTHO05D000047 1.6e-07 58.9 53 47.2
arahy.Tifrunner.gnm1.ann1.CN0JQN Arachis hypogaea HOM05D000002 ORTHO05D000047 3.5e-07 57.8 56 46.4
Prupe.6G327500 Prunus persica HOM05D000002 ORTHO05D000047 3.5e-07 57.8 53 49.1
Manes.09G097750 Manihot esculenta HOM05D000002 ORTHO05D000047 4.6e-07 57.4 55 50.9
Prupe.1G241200 Prunus persica HOM05D000002 ORTHO05D000047 4.6e-07 57.4 53 47.2
VMungo1215G1550 Vigna mungo HOM05D004417 ORTHO05D005528 4.6e-07 57.4 51 51.0
Manes.09G001867 Manihot esculenta HOM05D000002 ORTHO05D000047 6.0e-07 57.0 55 54.5
Manes.10G073332 Manihot esculenta HOM05D000002 ORTHO05D000047 7.8e-07 56.6 55 50.9
Manes.17G072401 Manihot esculenta HOM05D000002 ORTHO05D000047 7.8e-07 56.6 55 49.1
SHI31190 Sapria himalayana HOM05D000002 ORTHO05D000047 7.8e-07 56.6 55 41.8
Cpa.g.sc12.9 Carica papaya HOM05D000002 ORTHO05D000047 1.0e-06 56.2 55 41.8
vmacro02334 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 1.0e-06 56.2 56 48.2
Hma1.2p1_1207F.1_g267040 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 1.3e-06 55.8 56 50.0
CSS0002432 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 1.7e-06 55.5 55 49.1
Medtr3g046340 Medicago truncatula HOM05D000002 ORTHO05D000047 1.7e-06 55.5 57 43.9
CSS0045239 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000047 2.3e-06 55.1 55 47.3
Ca_08364_v3 Cicer arietinum L. HOM05D007163 ORTHO05D009213 2.3e-06 55.1 56 46.4
QL02p002557 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-06 54.7 41 63.4
QL12p040299 Quercus lobata HOM05D000002 ORTHO05D000001 3.0e-06 54.7 41 63.4
vmacro04211 Vaccinium macrocarpon HOM05D002268 ORTHO05D000047 3.0e-06 54.7 56 48.2
vmacro08840 Vaccinium macrocarpon HOM05D000002 ORTHO05D000047 3.0e-06 54.7 56 48.2
CSS0010794 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 3.9e-06 54.3 56 42.9
Hma1.2p1_0069F.1_g037490 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 3.9e-06 54.3 56 48.2
Hma1.2p1_0111F.1_g053730 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
Hma1.2p1_0111F.1_g053735 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
Hma1.2p1_0158F.1_g069853 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
Hma1.2p1_0308F.1_g120095 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
Hma1.2p1_0308F.1_g120101 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
Hma1.2p1_0901F.1_g234740 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 5.1e-06 53.9 55 41.8
TPR.G10316 Trifolium pratense HOM05D000002 ORTHO05D000047 5.1e-06 53.9 52 48.1
Hma1.2p1_0812F.1_g222220 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 6.6e-06 53.5 53 47.2
TWI23G0973 Tripterygium wilfordii HOM05D000002 ORTHO05D000047 6.6e-06 53.5 56 42.9
CSS0048790 Camellia sinensis var. sinensis HOM05D000002 ORTHO05D000001 8.6e-06 53.1 56 46.4
Hma1.2p1_0349F.1_g132140 Hydrangea macrophylla HOM05D000002 ORTHO05D000047 8.6e-06 53.1 55 43.6


User provided reference genes

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