Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030810 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 9.1e-47 189.9 96 100.0
CSS0020638 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.1e-28 129.8 70 92.9
CSS0034215 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.1e-28 129.8 70 92.9
CSS0036244 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.1e-28 129.8 70 92.9
CSS0042890 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 1.1e-28 129.8 70 92.9
CSS0046240 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.5e-28 128.6 70 91.4
CSS0047773 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 2.3e-26 122.1 92 73.9
CSS0045726 Camellia sinensis var. sinensis HOM05D010774 ORTHO05D013539 3.1e-18 95.1 70 71.4
Rhsim06G0155100 Rhododendron simsii HOM05D010774 ORTHO05D013539 9.9e-17 90.1 100 51.0
Rhsim11G0067500 Rhododendron simsii HOM05D010774 ORTHO05D013539 1.4e-15 86.3 94 50.0
CSS0005762 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 4.1e-15 84.7 80 58.8
CSS0016483 Camellia sinensis var. sinensis HOM05D002089 ORTHO05D013539 4.1e-15 84.7 80 58.8
Rhsim02G0039500 Rhododendron simsii HOM05D010774 ORTHO05D013539 6.0e-14 80.9 69 56.5
Rhsim09G0158800 Rhododendron simsii HOM05D010774 ORTHO05D013539 5.8e-09 64.3 58 56.9
Hma1.2p1_0174F.1_g076560 Hydrangea macrophylla HOM05D001309 ORTHO05D000385 4.2e-07 58.2 54 48.1
Dinv04435 Davidia involucrata HOM05D001309 ORTHO05D013539 1.2e-06 56.6 62 43.5
Rhsim06G0190000 Rhododendron simsii HOM05D001309 ORTHO05D000385 1.6e-06 56.2 76 43.4
Rhsim09G0075900 Rhododendron simsii HOM05D000107 ORTHO05D000062 1.6e-06 56.2 76 43.4
Rhsim10G0033700 Rhododendron simsii HOM05D001309 ORTHO05D000385 6.0e-06 54.3 76 43.4


User provided reference genes

Program Settings