Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030757 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 8.0e-45 183.3 90 100.0
CSS0021266 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 5.6e-38 160.6 90 91.1
Dinv29200 Davidia involucrata HOM05D000028 ORTHO05D006165 1.1e-28 129.8 85 74.1
Dinv17287 Davidia involucrata HOM05D000028 ORTHO05D006165 1.8e-28 129.0 83 74.7
Hma1.2p1_0415F.1_g148310 Hydrangea macrophylla HOM05D000028 ORTHO05D006165 5.2e-28 127.5 84 71.4
CSS0029142 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D006165 1.7e-26 122.5 83 73.5
Phvul.009G039200 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 1.7e-26 122.5 83 66.3
vmacro06464 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 4.9e-26 120.9 83 72.3
Thecc.03G211000 Theobroma cacao HOM05D000028 ORTHO05D006165 6.4e-26 120.6 85 69.4
Atru.chr12.2465 Acer truncatum HOM05D000028 ORTHO05D006165 1.9e-25 119.0 83 68.7
Atru.chr12.2469 Acer truncatum HOM05D000028 ORTHO05D006165 1.9e-25 119.0 83 68.7
Atru.chr12.2536 Acer truncatum HOM05D000028 ORTHO05D006165 1.9e-25 119.0 83 68.7
MD01G1230200 Malus domestica HOM05D000028 ORTHO05D006165 2.4e-25 118.6 85 69.4
Duzib068G0829 Durio zibethinus HOM05D000028 ORTHO05D006165 9.2e-25 116.7 85 67.1
Glyma.06G138300 Glycine max HOM05D000028 ORTHO05D006165 9.2e-25 116.7 83 68.7
Lalb_Chr10g0103061 Lupinus albus HOM05D000028 ORTHO05D006165 1.2e-24 116.3 85 61.2
COL.COLO4_14388 Corchorus olitorius HOM05D000028 ORTHO05D006165 1.6e-24 115.9 85 65.9
Psat2g061960 Pisum sativum HOM05D000028 ORTHO05D006165 2.1e-24 115.5 85 63.5
TPR.G5790 Trifolium pratense HOM05D000028 ORTHO05D006165 4.6e-24 114.4 86 61.6
Medtr5g068790 Medicago truncatula HOM05D000028 ORTHO05D006165 6.0e-24 114.0 83 61.4
TPR.G5815 Trifolium pratense HOM05D000028 ORTHO05D006165 6.0e-24 114.0 83 57.8
Actinidia34281 Actinidia chinensis HOM05D000028 ORTHO05D006165 7.8e-24 113.6 76 69.7
Cfa016142 Carpinus fangiana HOM05D002523 ORTHO05D002951 7.8e-24 113.6 85 67.1
Glyma.02G222100 Glycine max HOM05D000028 ORTHO05D006165 1.3e-23 112.8 83 62.7
Medtr5g069040 Medicago truncatula HOM05D000028 ORTHO05D006165 1.3e-23 112.8 83 59.0
QL09p006522 Quercus lobata HOM05D000028 ORTHO05D006165 1.3e-23 112.8 87 63.2
PGR042G1905 Punica granatum HOM05D000028 ORTHO05D006165 1.7e-23 112.5 85 68.2
CiPaw.05G207400 Carya illinoinensis HOM05D000028 ORTHO05D006165 2.3e-23 112.1 87 60.9
vmacro06462 Vaccinium macrocarpon HOM05D000028 ORTHO05D006165 2.3e-23 112.1 75 73.3
Lalb_Chr17g0344771 Lupinus albus HOM05D000028 ORTHO05D006165 3.0e-23 111.7 86 60.5
Prupe.2G320900 Prunus persica HOM05D000028 ORTHO05D006165 3.0e-23 111.7 86 66.3
Cc01_g04610 Coffea canephora HOM05D000028 ORTHO05D006165 6.6e-23 110.5 82 68.3
Sabra12G0036300 Salix brachista HOM05D000028 ORTHO05D006165 8.6e-23 110.2 89 57.3
Glyma.02G222000 Glycine max HOM05D000028 ORTHO05D006165 1.5e-22 109.4 82 62.2
Sed0025832 Sechium edule HOM05D000028 ORTHO05D006165 1.5e-22 109.4 76 69.7
arahy.Tifrunner.gnm1.ann1.6MS9TD Arachis hypogaea HOM05D000028 ORTHO05D006165 3.3e-22 108.2 83 63.9
Gohir.A12G245400 Gossypium hirsutum HOM05D000028 ORTHO05D006165 3.3e-22 108.2 85 61.2
RcHm_v2.0_Chr1g0383151 Rosa chinensis HOM05D000028 ORTHO05D006165 3.3e-22 108.2 85 64.7
Gohir.D12G246100 Gossypium hirsutum HOM05D000028 ORTHO05D006165 4.3e-22 107.8 85 61.2
Gorai.008G263800 Gossypium raimondii HOM05D000028 ORTHO05D006165 4.3e-22 107.8 85 61.2
Rhsim03G0217300 Rhododendron simsii HOM05D000028 ORTHO05D006165 4.3e-22 107.8 70 77.1
Psat2g061920 Pisum sativum HOM05D000028 ORTHO05D006165 5.6e-22 107.5 83 57.8
PGR083G1462 Punica granatum HOM05D000028 ORTHO05D006165 7.3e-22 107.1 76 71.1
Sc07g0009810 Simmondsia chinensis HOM05D000028 ORTHO05D006165 9.5e-22 106.7 85 55.3
arahy.Tifrunner.gnm1.ann1.BCU2N4 Arachis hypogaea HOM05D000028 ORTHO05D006165 1.6e-21 105.9 83 62.7
LjContig00155g0002347 Lotus japonicus HOM05D000028 ORTHO05D006165 1.6e-21 105.9 83 57.8
Peaxi162Scf01026g00264 Petunia axillaris HOM05D000028 ORTHO05D006165 2.8e-21 105.1 89 59.6
Medtr3g019050 Medicago truncatula HOM05D000028 ORTHO05D006165 3.6e-21 104.8 83 56.6
FvH4_7g33100 Fragaria vesca HOM05D000028 ORTHO05D006165 6.2e-21 104.0 85 61.2
Gohir.D04G000005 Gossypium hirsutum HOM05D000028 ORTHO05D006165 6.2e-21 104.0 88 58.0
Gohir.D04G000700 Gossypium hirsutum HOM05D000028 ORTHO05D006165 6.2e-21 104.0 88 58.0
Oeu017363.1 Olea europaea HOM05D000028 ORTHO05D006165 6.2e-21 104.0 77 66.2
Psat7g236960 Pisum sativum HOM05D000028 ORTHO05D006165 6.2e-21 104.0 85 57.6
Potri.012G007700 Populus trichocarpa HOM05D000028 ORTHO05D006165 6.2e-21 104.0 86 58.1
SalBow4G1903 Salvia bowleyana HOM05D000028 ORTHO05D006165 8.1e-21 103.6 87 62.1
SalBow4G2108 Salvia bowleyana HOM05D000028 ORTHO05D006165 8.1e-21 103.6 87 62.1
TAR375G0937 Trochodendron aralioides HOM05D000028 ORTHO05D006165 8.1e-21 103.6 83 59.0
Eucgr.A00970 Eucalyptus grandis HOM05D000028 ORTHO05D006165 1.1e-20 103.2 82 61.0
FAN10G1022 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.4e-20 102.8 85 61.2
FAN10G2170 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.4e-20 102.8 85 61.2
SGA_v2.0_scaffold18G08484 Striga asiatica HOM05D000028 ORTHO05D006165 1.4e-20 102.8 83 61.4
FAN01G0940 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.8e-20 102.4 85 61.2
Gorai.012G001700 Gossypium raimondii HOM05D000028 ORTHO05D006165 1.8e-20 102.4 88 56.8
Sopen03g021800 Solanum pennellii HOM05D000028 ORTHO05D006165 1.8e-20 102.4 84 59.5
VMungo0647G2198 Vigna mungo HOM05D000028 ORTHO05D006165 1.8e-20 102.4 83 59.0
Glyma.14G189200 Glycine max HOM05D000028 ORTHO05D006165 2.4e-20 102.1 83 56.6
TPR.G5833 Trifolium pratense HOM05D000028 ORTHO05D006165 4.0e-20 101.3 92 52.2
Migut.F00134 Erythranthe guttata HOM05D000028 ORTHO05D006165 6.8e-20 100.5 84 59.5
FAN03G0459 Fragaria x ananassa HOM05D000028 ORTHO05D006165 1.2e-19 99.8 85 58.8
Solyc03g080070.4 Solanum lycopersicum HOM05D000028 ORTHO05D006165 1.2e-19 99.8 84 58.3
CANSAT21G0777 Cannabis sativa HOM05D000028 ORTHO05D006165 1.5e-19 99.4 83 59.0
CANSAT21G1010 Cannabis sativa HOM05D000028 ORTHO05D006165 1.5e-19 99.4 83 59.0
CAN.G303.44 Capsicum annuum HOM05D000028 ORTHO05D006165 1.5e-19 99.4 84 59.5
Hund09730 Selenicereus undatus HOM05D000028 ORTHO05D006165 1.5e-19 99.4 77 59.7
Lj1A1030G34 Lonicera japonica HOM05D000028 ORTHO05D006165 2.0e-19 99.0 70 64.3
LjContig00155g0011791 Lotus japonicus HOM05D000028 ORTHO05D006165 2.0e-19 99.0 75 54.7
Hund21075 Selenicereus undatus HOM05D000028 ORTHO05D006165 2.6e-19 98.6 70 62.9
SGA_v2.0_scaffold5G02751 Striga asiatica HOM05D000028 ORTHO05D006165 2.6e-19 98.6 83 61.4
Cpa.g.sc3.172 Carica papaya HOM05D000028 ORTHO05D006165 3.4e-19 98.2 77 63.6
CiPaw.06G039100 Carya illinoinensis HOM05D000028 ORTHO05D006165 5.8e-19 97.4 83 55.4
DCAR_014596 Daucus carota HOM05D000028 ORTHO05D006165 1.7e-18 95.9 82 59.8
CANSAT21G1254 Cannabis sativa HOM05D000028 ORTHO05D006165 2.2e-18 95.5 86 58.1
Nn6g33769 Nelumbo nucifera HOM05D000028 ORTHO05D006165 2.2e-18 95.5 83 51.8
Peaxi162Scf00542g00017 Petunia axillaris HOM05D000028 ORTHO05D006165 4.9e-18 94.4 76 57.9
Cpa.g.sc3.173 Carica papaya HOM05D000028 ORTHO05D006165 4.2e-17 91.3 70 65.7
Sabra12G0009200 Salix brachista HOM05D000028 ORTHO05D006165 1.2e-16 89.7 89 49.4
CANSAT21G0119 Cannabis sativa HOM05D000028 ORTHO05D006165 2.1e-16 89.0 69 60.9
Sc13g0010620 Simmondsia chinensis HOM05D000028 ORTHO05D006165 2.1e-16 89.0 84 48.8
HPP92_008984 Vanilla planifolia HOM05D000028 ORTHO05D006165 3.5e-16 88.2 80 51.2
Haze_00318 Corylus avellana HOM05D000028 ORTHO05D006165 6.0e-16 87.4 64 70.3
Cc03_g14930 Coffea canephora HOM05D000028 ORTHO05D006165 7.8e-16 87.0 83 49.4
Ah.07g204340 Amaranthus hybridus HOM05D000028 ORTHO05D006165 2.5e-14 82.0 62 64.5
Medtr5g089390 Medicago truncatula HOM05D000028 ORTHO05D006165 7.3e-14 80.5 84 46.4
MBI04_g33446_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 4.7e-13 77.8 77 48.1
HPP92_022289 Vanilla planifolia HOM05D000028 ORTHO05D006165 4.7e-13 77.8 72 50.0
Phvul.008G188800 Phaseolus vulgaris HOM05D000028 ORTHO05D006165 1.1e-12 76.6 62 61.3
Peaxi162Scf01026g00265 Petunia axillaris HOM05D000028 ORTHO05D006165 1.4e-12 76.3 95 43.2
Lj6C588G11 Lonicera japonica HOM05D000028 ORTHO05D006165 4.0e-12 74.7 74 51.4
Nitab4.5_0000021g0050 Nicotiana tabacum HOM05D000028 ORTHO05D006165 1.2e-11 73.2 62 59.7
ClCG07G009680 Citrullus lanatus HOM05D000028 ORTHO05D006165 1.5e-11 72.8 53 67.9
MBI04_g33445_MAGBIO Magnolia biondii HOM05D000028 ORTHO05D006165 2.0e-11 72.4 72 44.4
Os10g0198900 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.6e-11 72.0 70 48.6
Lalb_Chr17g0344801 Lupinus albus HOM05D000028 ORTHO05D006165 7.6e-11 70.5 49 67.3
Os10g0199500 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 7.6e-11 70.5 70 45.7
Os10g0197700 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 2.2e-10 68.9 89 38.2
Zm00001eb112240 Zea mays HOM05D000028 ORTHO05D006165 6.4e-10 67.4 70 45.7
Os12g0288000 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 1.6e-08 62.8 72 40.3
Eucgr.H01303 Eucalyptus grandis HOM05D000028 ORTHO05D004287 7.8e-08 60.5 78 34.6
Os08g0402800 Oryza sativa ssp. japonica HOM05D000028 ORTHO05D006165 5.1e-07 57.8 70 40.0
Sed0012499 Sechium edule HOM05D000028 ORTHO05D001343 1.5e-06 56.2 79 30.4
CAN.G1374.1 Capsicum annuum HOM05D000028 ORTHO05D004287 1.9e-06 55.8 77 33.8
Manes.10G037100 Manihot esculenta HOM05D000028 ORTHO05D001343 1.9e-06 55.8 84 31.0
Cc02_g22010 Coffea canephora HOM05D000028 ORTHO05D001343 2.5e-06 55.5 75 34.7
ATR1149G110 Amborella trichopoda HOM05D000028 ORTHO05D003251 3.3e-06 55.1 73 35.6
PSO675G2949 Papaver somniferum HOM05D000028 ORTHO05D001343 3.3e-06 55.1 75 36.0
Zm00001eb229370 Zea mays HOM05D000028 ORTHO05D006165 3.3e-06 55.1 70 41.4
Sp1g23010 Schrenkiella parvula HOM05D000028 ORTHO05D001343 4.3e-06 54.7 75 34.7
MELO3C004162.2 Cucumis melo HOM05D000028 ORTHO05D004287 5.6e-06 54.3 77 29.9
PSO541G5709 Papaver somniferum HOM05D000028 ORTHO05D001343 9.6e-06 53.5 70 35.7
TPR.G16388 Trifolium pratense HOM05D000028 ORTHO05D000296 9.6e-06 53.5 75 33.3


User provided reference genes

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