Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030731 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.8e-145 519.2 265 100.0
CSS0003795 Camellia sinensis var. sinensis HOM05D000125 ORTHO05D010101 1.5e-99 366.7 279 73.1
CSS0022186 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.9e-57 226.9 308 47.7
CSS0032415 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.4e-57 225.3 320 45.9
CSS0010878 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 2.1e-53 213.4 309 45.0
CSS0027146 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.6e-53 212.6 332 43.4
CSS0003791 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.0e-47 193.0 320 43.1
CSS0042755 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.3e-45 187.6 294 42.9
CSS0029307 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 1.6e-45 187.2 201 53.2
CSS0025888 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 6.7e-39 165.2 240 45.8
CSS0034581 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 5.8e-35 152.1 211 46.4
CSS0047661 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 8.4e-34 148.3 202 45.5
CSS0031884 Camellia sinensis var. sinensis HOM05D009378 ORTHO05D010101 3.5e-32 142.9 245 42.4
Cfa013571 Carpinus fangiana HOM05D000125 ORTHO05D010101 1.9e-25 120.6 281 31.7
QL09p028133 Quercus lobata HOM05D009378 ORTHO05D010101 3.0e-23 113.2 259 31.7
QL05p062837 Quercus lobata HOM05D009378 ORTHO05D010101 6.7e-23 112.1 265 33.2
QL09p024465 Quercus lobata HOM05D000125 ORTHO05D010101 3.7e-21 106.3 274 30.7
QL09p024149 Quercus lobata HOM05D009378 ORTHO05D010101 1.1e-20 104.8 274 31.0
QL93p0209_0042 Quercus lobata HOM05D009378 ORTHO05D010101 1.1e-20 104.8 274 31.0
Haze_00406 Corylus avellana HOM05D000125 ORTHO05D010101 1.4e-20 104.4 113 47.8
QL09p024027 Quercus lobata HOM05D009378 ORTHO05D010101 3.1e-20 103.2 247 32.8
Cfa016027 Carpinus fangiana HOM05D009378 ORTHO05D010101 4.1e-20 102.8 246 29.7
QL09p024175 Quercus lobata HOM05D009378 ORTHO05D010101 5.3e-20 102.4 263 31.2
QL93p0209_0016 Quercus lobata HOM05D009378 ORTHO05D010101 2.6e-19 100.1 259 30.5
Haze_00404 Corylus avellana HOM05D000125 ORTHO05D010101 3.4e-19 99.8 262 29.4
Sed0024411 Sechium edule HOM05D024292 ORTHO05D010101 7.7e-19 98.6 268 27.6
QL09p024013 Quercus lobata HOM05D008014 ORTHO05D010101 1.3e-18 97.8 246 31.7
QL04p029580 Quercus lobata HOM05D000125 ORTHO05D000120 1.7e-18 97.4 182 34.1
QL04p029877 Quercus lobata HOM05D020596 ORTHO05D010101 1.7e-18 97.4 182 34.1
Cfa016894 Carpinus fangiana HOM05D000125 ORTHO05D010101 2.2e-18 97.1 220 32.7
Cpa.g.sc623.3 Carica papaya HOM05D009378 ORTHO05D010101 2.9e-18 96.7 288 29.2
Haze_19953 Corylus avellana HOM05D009378 ORTHO05D010101 6.5e-18 95.5 216 33.3
Haze_00427 Corylus avellana HOM05D000125 ORTHO05D010101 1.9e-17 94.0 220 34.5
Cfa007320 Carpinus fangiana HOM05D000125 ORTHO05D010101 3.2e-17 93.2 277 30.0
Cfa016029 Carpinus fangiana HOM05D009378 ORTHO05D010101 9.4e-17 91.7 185 30.3
Cfa016031 Carpinus fangiana HOM05D000125 ORTHO05D010101 9.4e-17 91.7 200 30.5
TWI81G0642 Tripterygium wilfordii HOM05D000125 ORTHO05D010101 1.2e-16 91.3 308 26.9
QL04p029779 Quercus lobata HOM05D020596 ORTHO05D010101 2.1e-16 90.5 204 32.8
QL09p024439 Quercus lobata HOM05D009378 ORTHO05D010101 2.1e-16 90.5 266 28.6
CiPaw.06G031800 Carya illinoinensis HOM05D000125 ORTHO05D010101 4.6e-16 89.4 263 29.7
QL05p044270 Quercus lobata HOM05D000125 ORTHO05D007874 6.1e-16 89.0 181 32.0
QL02p073603 Quercus lobata HOM05D000125 ORTHO05D010101 8.8e-15 85.1 193 31.6
Actinidia13804 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.1e-14 84.7 205 31.2
Actinidia13806 Actinidia chinensis HOM05D000125 ORTHO05D030879 1.5e-14 84.3 203 32.0
Haze_14777 Corylus avellana HOM05D000125 ORTHO05D010101 2.0e-14 84.0 263 29.3
Actinidia02169 Actinidia chinensis HOM05D000125 ORTHO05D030879 4.3e-14 82.8 170 34.1
QL04p029513 Quercus lobata HOM05D000125 ORTHO05D000120 1.7e-13 80.9 110 40.9
Rhsim13G0216300 Rhododendron simsii HOM05D000448 ORTHO05D000291 1.7e-13 80.9 240 31.2
QL04p029700 Quercus lobata HOM05D020596 ORTHO05D010101 2.8e-13 80.1 151 35.1
Eucgr.E00390 Eucalyptus grandis HOM05D009378 ORTHO05D010101 3.7e-13 79.7 211 29.9
PGR031G1316 Punica granatum HOM05D000125 ORTHO05D010101 3.7e-13 79.7 242 27.3
Eucgr.E00385 Eucalyptus grandis HOM05D000125 ORTHO05D010101 4.8e-13 79.3 256 28.1
PGR044G2047 Punica granatum HOM05D009378 ORTHO05D010101 8.2e-13 78.6 290 27.6
PGR042G0442 Punica granatum HOM05D000125 ORTHO05D000807 5.3e-12 75.9 279 25.8
Cpa.g.sc623.1 Carica papaya HOM05D009378 ORTHO05D010101 2.0e-11 73.9 245 28.6
PGR031G1223 Punica granatum HOM05D009378 ORTHO05D010101 2.0e-11 73.9 174 32.2
QL04p029334 Quercus lobata HOM05D020596 ORTHO05D010101 7.7e-11 72.0 118 38.1
PGR102G3309 Punica granatum HOM05D000125 ORTHO05D010101 1.3e-10 71.2 279 29.0
CANSAT21G1400 Cannabis sativa HOM05D000125 ORTHO05D010101 1.1e-09 68.2 178 28.1
CANSAT21G1703 Cannabis sativa HOM05D000125 ORTHO05D000120 1.9e-09 67.4 174 27.0
Haze_00401 Corylus avellana HOM05D009378 ORTHO05D010101 1.9e-09 67.4 129 38.8
ClCG01G004310 Citrullus lanatus HOM05D024292 ORTHO05D010101 2.5e-09 67.0 271 22.5
Ciclev10014060m.g Citrus clementina HOM05D000125 ORTHO05D000120 2.7e-08 63.5 192 21.9
CANSAT11G0715 Cannabis sativa HOM05D000125 ORTHO05D000120 3.9e-07 59.7 178 27.5
CANSAT11G2008 Cannabis sativa HOM05D000125 ORTHO05D010101 2.0e-06 57.4 174 25.9
Ciclev10027597m.g Citrus clementina HOM05D000125 ORTHO05D000120 2.6e-06 57.0 90 32.2
ClCG01G004320 Citrullus lanatus HOM05D024292 ORTHO05D010101 5.7e-06 55.8 198 24.7
CANSAT11G0949 Cannabis sativa HOM05D000125 ORTHO05D010101 9.7e-06 55.1 196 29.1


User provided reference genes

Program Settings