Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030697 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.8e-90 335.9 172 100.0
Actinidia31832 Actinidia chinensis HOM05D006494 ORTHO05D007787 2.8e-54 215.7 166 72.9
Rhsim09G0200100 Rhododendron simsii HOM05D006494 ORTHO05D007787 2.0e-52 209.5 168 70.2
Rhsim09G0199800 Rhododendron simsii HOM05D006494 ORTHO05D007787 9.9e-52 207.2 168 69.0
vmacro09820 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.8e-51 205.3 169 67.5
Dinv28397 Davidia involucrata HOM05D006494 ORTHO05D007787 1.4e-50 203.4 172 66.3
Actinidia20864 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.3e-48 196.8 172 65.1
Actinidia34147 Actinidia chinensis HOM05D006494 ORTHO05D007787 3.3e-47 192.2 170 63.5
Rhsim03G0190000 Rhododendron simsii HOM05D006494 ORTHO05D007787 3.4e-44 182.2 168 66.7
Hma1.2p1_0327F.1_g126290 Hydrangea macrophylla HOM05D006494 ORTHO05D007787 1.0e-40 170.6 170 58.8
CSS0049923 Camellia sinensis var. sinensis HOM05D006494 ORTHO05D007787 1.8e-40 169.9 170 61.2
Actinidia08572 Actinidia chinensis HOM05D006494 ORTHO05D007787 1.5e-36 156.8 146 63.0
vmacro06639 Vaccinium macrocarpon HOM05D006494 ORTHO05D007787 3.4e-36 155.6 132 66.7
Thecc.04G169800 Theobroma cacao HOM05D006494 ORTHO05D007787 2.3e-32 142.9 159 49.1
CiPaw.05G263300 Carya illinoinensis HOM05D006494 ORTHO05D007787 1.5e-31 140.2 164 50.0
DCAR_020265 Daucus carota HOM05D006494 ORTHO05D007787 2.8e-30 136.0 166 53.0
Duzib268G1872 Durio zibethinus HOM05D006494 ORTHO05D007787 6.3e-30 134.8 159 48.4
Solyc03g025160.4 Solanum lycopersicum HOM05D006494 ORTHO05D007787 5.3e-29 131.7 164 51.2
Sopen03g004010 Solanum pennellii HOM05D006494 ORTHO05D007787 5.3e-29 131.7 164 51.2
PGSC0003DMG400010122 Solanum tuberosum HOM05D006494 ORTHO05D007787 5.3e-29 131.7 164 50.6
Duzib151G1204 Durio zibethinus HOM05D006494 ORTHO05D007787 6.9e-29 131.3 171 45.0
Gohir.A02G091800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 6.9e-29 131.3 171 45.0
Cc02_g02520 Coffea canephora HOM05D006494 ORTHO05D007787 1.5e-28 130.2 159 52.2
Gohir.D02G108900 Gossypium hirsutum HOM05D006494 ORTHO05D007787 2.6e-28 129.4 171 44.4
Gorai.005G124800 Gossypium raimondii HOM05D006494 ORTHO05D007787 2.6e-28 129.4 171 44.4
Migut.F01093 Erythranthe guttata HOM05D006494 ORTHO05D007787 4.5e-28 128.6 168 50.6
TWI23G1164 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 4.5e-28 128.6 174 48.9
QL09p013118 Quercus lobata HOM05D006494 ORTHO05D007787 1.3e-27 127.1 163 46.6
TWI39G0535 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 2.2e-27 126.3 173 46.2
Eucgr.K00289 Eucalyptus grandis HOM05D006494 ORTHO05D007787 3.8e-27 125.6 170 45.3
Cfa016278 Carpinus fangiana HOM05D006494 ORTHO05D007787 1.9e-26 123.2 171 45.6
COL.COLO4_28030 Corchorus olitorius HOM05D006494 ORTHO05D007787 3.2e-26 122.5 159 46.5
Nitab4.5_0000084g0320 Nicotiana tabacum HOM05D006494 ORTHO05D007787 4.2e-26 122.1 169 47.3
Haze_00032 Corylus avellana HOM05D006494 ORTHO05D007787 9.3e-26 120.9 171 46.2
Ciclev10005709m.g Citrus clementina HOM05D006494 ORTHO05D007787 6.1e-25 118.2 166 48.2
SalBow2G1868 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.9e-25 117.9 169 49.7
SalBow2G2185 Salvia bowleyana HOM05D006494 ORTHO05D007787 7.9e-25 117.9 169 49.7
MSTRG.8473 Avicennia marina HOM05D006494 ORTHO05D007787 1.5e-23 113.6 168 45.2
ECA232G1863 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.5e-23 113.6 176 43.2
TAR629G2733 Trochodendron aralioides HOM05D006494 ORTHO05D007787 4.3e-23 112.1 176 44.3
Gohir.D10G124800 Gossypium hirsutum HOM05D006494 ORTHO05D007787 7.4e-23 111.3 170 42.4
PGR142G1234 Punica granatum HOM05D006494 ORTHO05D007787 9.7e-23 110.9 175 44.6
Gorai.011G137900 Gossypium raimondii HOM05D006494 ORTHO05D007787 3.7e-22 109.0 170 41.8
Cpa.g.sc107.95 Carica papaya HOM05D006494 ORTHO05D007787 8.2e-22 107.8 167 43.7
Gohir.A10G141700 Gossypium hirsutum HOM05D006494 ORTHO05D007787 3.1e-21 105.9 170 40.6
Manes.06G151500 Manihot esculenta HOM05D006494 ORTHO05D007787 5.3e-21 105.1 165 41.2
TWI39G0536 Tripterygium wilfordii HOM05D006494 ORTHO05D007787 6.9e-21 104.8 172 41.9
Ciclev10030388m.g Citrus clementina HOM05D006494 ORTHO05D007787 2.0e-20 103.2 164 43.3
Prupe.7G058200 Prunus persica HOM05D006494 ORTHO05D007787 2.6e-20 102.8 166 40.4
HanXRQChr09g0252471 Helianthus annuus HOM05D006494 ORTHO05D007787 7.7e-20 101.3 159 44.7
COL.COLO4_10079 Corchorus olitorius HOM05D006494 ORTHO05D007787 2.9e-19 99.4 165 42.4
ECA232G4003 Erigeron canadensis HOM05D006494 ORTHO05D007787 1.1e-18 97.4 144 44.4
SGA_v2.0_scaffold10G05304 Striga asiatica HOM05D006494 ORTHO05D007787 2.5e-18 96.3 169 43.2
ClCG05G008270 Citrullus lanatus HOM05D006494 ORTHO05D007787 2.7e-17 92.8 170 33.5
RcHm_v2.0_Chr3g0482351 Rosa chinensis HOM05D006494 ORTHO05D007787 2.7e-17 92.8 171 39.2
Nn6g33336 Nelumbo nucifera HOM05D006494 ORTHO05D007787 7.9e-17 91.3 183 39.3
PGSC0003DMG400029922 Solanum tuberosum HOM05D006494 ORTHO05D007787 7.9e-17 91.3 145 44.8
MD12G1079700 Malus domestica HOM05D006494 ORTHO05D007787 1.4e-16 90.5 155 36.8
Peaxi162Scf00444g00014 Petunia axillaris HOM05D006494 ORTHO05D007787 1.4e-16 90.5 172 37.8
Prupe.7G043900 Prunus persica HOM05D006494 ORTHO05D007787 8.8e-16 87.8 212 33.0
Thecc.03G182400 Theobroma cacao HOM05D006494 ORTHO05D007787 8.8e-16 87.8 165 39.4
MELO3C018639.2 Cucumis melo HOM05D006494 ORTHO05D007787 1.5e-15 87.0 171 33.9
Peaxi162Scf00618g00753 Petunia axillaris HOM05D006494 ORTHO05D007787 1.5e-15 87.0 174 36.8
CsaV3_3G017370 Cucumis sativus L. HOM05D006494 ORTHO05D007787 2.6e-15 86.3 171 33.3
PGSC0003DMG400017033 Solanum tuberosum HOM05D006494 ORTHO05D007787 3.3e-15 85.9 130 46.2
Lsat_1_v5_gn_9_57501 Lactuca sativa HOM05D006494 ORTHO05D007787 4.4e-15 85.5 164 38.4
Manes.14G023400 Manihot esculenta HOM05D006494 ORTHO05D007787 1.3e-14 84.0 147 40.8
GSVIVG01034561001 Vitis vinifera HOM05D006494 ORTHO05D007787 1.3e-14 84.0 180 35.6
MD07G1041300 Malus domestica HOM05D006494 ORTHO05D007787 4.8e-14 82.0 166 35.5
Migut.F00309 Erythranthe guttata HOM05D006494 ORTHO05D007787 1.4e-13 80.5 176 36.9
MD14G1075900 Malus domestica HOM05D006494 ORTHO05D007787 3.1e-13 79.3 156 37.8
Oeu006795.1 Olea europaea HOM05D006494 ORTHO05D007787 3.1e-13 79.3 168 37.5
RcHm_v2.0_Chr3g0482771 Rosa chinensis HOM05D006494 ORTHO05D007787 5.3e-13 78.6 168 36.3
Aqoxy3G03609 Aquilegia oxysepala HOM05D006748 ORTHO05D008553 9.1e-13 77.8 157 36.3
VMungo0720G0554 Vigna mungo HOM05D006494 ORTHO05D007787 6.5e-11 71.6 172 33.1
FAN13G0811 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.5e-11 71.2 164 31.7
Sed0015630 Sechium edule HOM05D006494 ORTHO05D007787 8.5e-11 71.2 170 32.9
Oeu022606.1 Olea europaea HOM05D006494 ORTHO05D007787 1.4e-10 70.5 168 35.7
GSVIVG01034560001 Vitis vinifera HOM05D006494 ORTHO05D007787 1.4e-10 70.5 74 48.6
FAN08G0782 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.6e-09 67.0 164 31.1
Ca_10732_v3 Cicer arietinum L. HOM05D006494 ORTHO05D007787 2.1e-09 66.6 189 31.2
unitig_46.g18800 Utricularia gibba HOM05D006494 ORTHO05D007787 2.1e-09 66.6 130 40.0
Phvul.007G073600 Phaseolus vulgaris HOM05D006494 ORTHO05D007787 6.1e-09 65.1 160 33.8
Sed0010736 Sechium edule HOM05D006494 ORTHO05D007787 6.1e-09 65.1 170 32.9
FAN18G4076 Fragaria x ananassa HOM05D006494 ORTHO05D007787 8.0e-09 64.7 164 30.5
FvH4_5g32440 Fragaria vesca HOM05D006494 ORTHO05D007787 1.0e-08 64.3 164 30.5
SHI13763 Sapria himalayana HOM05D000481 ORTHO05D003804 1.0e-08 64.3 168 36.9
Lalb_Chr02g0144041 Lupinus albus HOM05D006494 ORTHO05D007787 2.3e-08 63.2 161 31.1
FvH4_6g37300 Fragaria vesca HOM05D006494 ORTHO05D007787 6.7e-08 61.6 163 30.1
FAN14G1471 Fragaria x ananassa HOM05D006494 ORTHO05D007787 6.7e-08 61.6 163 30.1
Glyma.20G162200 Glycine max HOM05D006494 ORTHO05D007787 1.1e-07 60.8 164 32.3
Glyma.10G231900 Glycine max HOM05D006494 ORTHO05D007787 2.0e-07 60.1 164 31.1
TPR.G26961 Trifolium pratense HOM05D006494 ORTHO05D007787 3.3e-07 59.3 178 30.3
arahy.Tifrunner.gnm1.ann1.HAQV4X Arachis hypogaea HOM05D006494 ORTHO05D007787 1.3e-06 57.4 170 31.2
FAN05G4065 Fragaria x ananassa HOM05D006494 ORTHO05D007787 1.3e-06 57.4 163 28.8
Nitab4.5_0000572g0070 Nicotiana tabacum HOM05D006494 ORTHO05D007787 1.3e-06 57.4 145 34.5
FAN02G3807 Fragaria x ananassa HOM05D006494 ORTHO05D007787 2.2e-06 56.6 163 28.8
Lj5g0022841 Lotus japonicus HOM05D006494 ORTHO05D007787 2.2e-06 56.6 173 31.2
arahy.Tifrunner.gnm1.ann1.J3K5XQ Arachis hypogaea HOM05D006494 ORTHO05D007787 6.3e-06 55.1 170 30.6


User provided reference genes

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