Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030688 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 5.3e-234 813.9 397 100.0
CSS0026926 Camellia sinensis var. sinensis HOM05D006754 ORTHO05D008403 3.2e-231 804.7 397 99.0
QL01p030969 Quercus lobata HOM05D006754 ORTHO05D008403 1.9e-159 566.2 397 71.0
Hma1.2p1_0615F.1_g189790 Hydrangea macrophylla HOM05D006754 ORTHO05D008403 6.9e-157 557.8 415 67.7
RcHm_v2.0_Chr5g0065861 Rosa chinensis HOM05D006754 ORTHO05D008403 2.9e-155 552.4 402 68.7
Potri.009G033700 Populus trichocarpa HOM05D006754 ORTHO05D008403 6.5e-155 551.2 408 67.9
Atru.chr3.3972 Acer truncatum HOM05D006754 ORTHO05D008403 1.4e-154 550.1 401 70.3
Lj2P1066T40 Lonicera japonica HOM05D006754 ORTHO05D008403 1.4e-154 550.1 407 68.1
FAN11G1342 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.6e-153 546.6 389 68.6
FvH4_3g36800 Fragaria vesca HOM05D006754 ORTHO05D008403 6.0e-153 544.7 388 68.6
COL.COLO4_18549 Corchorus olitorius HOM05D006754 ORTHO05D008403 1.6e-150 536.6 398 66.3
FAN25G2379 Fragaria x ananassa HOM05D006754 ORTHO05D008403 1.6e-150 536.6 387 68.0
Thecc.09G318400 Theobroma cacao HOM05D006754 ORTHO05D008403 2.8e-150 535.8 398 66.1
Haze_24130 Corylus avellana HOM05D006754 ORTHO05D008403 2.4e-149 532.7 399 68.2
CiPaw.14G067200 Carya illinoinensis HOM05D006754 ORTHO05D008403 3.4e-148 528.9 401 66.1
Potri.001G242400 Populus trichocarpa HOM05D006754 ORTHO05D008403 1.0e-147 527.3 406 65.5
MD03G1088200 Malus domestica HOM05D006754 ORTHO05D008403 6.5e-147 524.6 406 65.0
Nn8g38772 Nelumbo nucifera HOM05D006754 ORTHO05D008403 8.5e-147 524.2 410 64.9
Ciclev10030407m.g Citrus clementina HOM05D006754 ORTHO05D008403 3.2e-146 522.3 397 65.0
TWI79G1092 Tripterygium wilfordii HOM05D006754 ORTHO05D008403 5.5e-146 521.5 404 64.1
Sabra16G0147200 Salix brachista HOM05D006754 ORTHO05D008403 1.2e-145 520.4 406 64.8
FAN16G0425 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.1e-145 519.6 392 64.8
Gorai.009G097800 Gossypium raimondii HOM05D006754 ORTHO05D008403 2.7e-145 519.2 398 64.8
Gohir.A05G094100 Gossypium hirsutum HOM05D006754 ORTHO05D008403 1.0e-144 517.3 398 64.8
Cpa.g.sc81.116 Carica papaya HOM05D006754 ORTHO05D008403 2.3e-144 516.2 400 63.8
Solyc07g007700.3 Solanum lycopersicum HOM05D006754 ORTHO05D008403 3.0e-144 515.8 402 63.2
Prupe.6G072500 Prunus persica HOM05D006754 ORTHO05D008403 3.9e-144 515.4 384 66.4
PGSC0003DMG400030707 Solanum tuberosum HOM05D006754 ORTHO05D008403 3.9e-144 515.4 387 65.1
Glyma.15G221700 Glycine max HOM05D006754 ORTHO05D008403 2.0e-143 513.1 400 64.0
Sopen07g003690 Solanum pennellii HOM05D006754 ORTHO05D008403 2.5e-143 512.7 386 64.5
Lsat_1_v5_gn_8_73421 Lactuca sativa HOM05D006754 ORTHO05D008403 3.3e-143 512.3 393 64.9
Sc12g0001320 Simmondsia chinensis HOM05D006754 ORTHO05D008403 9.1e-141 504.2 398 62.8
Oeu026710.1 Olea europaea HOM05D006754 ORTHO05D008403 1.2e-140 503.8 430 60.5
Glyma.08G227600 Glycine max HOM05D006754 ORTHO05D008403 1.5e-140 503.4 402 62.9
Aqoxy2G02260 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 7.7e-140 501.1 392 65.1
Psat4g178480 Pisum sativum HOM05D006754 ORTHO05D008403 1.3e-139 500.4 405 63.0
VMungo1127G1194 Vigna mungo HOM05D006754 ORTHO05D008403 1.1e-138 497.3 399 62.4
MSTRG.21206 Avicennia marina HOM05D006754 ORTHO05D008403 1.2e-137 493.8 415 62.4
Ca_24122_v3 Cicer arietinum L. HOM05D006754 ORTHO05D008403 1.2e-137 493.8 403 61.3
PSO339G3555 Papaver somniferum HOM05D006754 ORTHO05D008403 2.1e-137 493.0 405 62.7
PSO063G1099 Papaver somniferum HOM05D006754 ORTHO05D008403 1.0e-136 490.7 403 62.5
HanXRQChr05g0135011 Helianthus annuus HOM05D006754 ORTHO05D008403 1.4e-136 490.3 376 63.0
Phvul.011G187300 Phaseolus vulgaris HOM05D006754 ORTHO05D008403 1.8e-136 490.0 399 62.9
CsaV3_1G034490 Cucumis sativus L. HOM05D006754 ORTHO05D008403 3.0e-136 489.2 399 62.9
Cc01_g13150 Coffea canephora HOM05D006754 ORTHO05D008403 3.9e-136 488.8 410 61.5
Migut.F00608 Erythranthe guttata HOM05D006754 ORTHO05D008403 3.9e-136 488.8 403 63.8
PGR102G0280 Punica granatum HOM05D006754 ORTHO05D008403 5.1e-136 488.4 400 63.8
Eucgr.B02322 Eucalyptus grandis HOM05D006754 ORTHO05D008403 1.1e-135 487.3 402 61.9
Manes.01G171100 Manihot esculenta HOM05D006754 ORTHO05D008403 1.1e-135 487.3 411 60.8
DCAR_005953 Daucus carota HOM05D006754 ORTHO05D008403 2.0e-135 486.5 414 60.4
CAN.G969.5 Capsicum annuum HOM05D006754 ORTHO05D008403 5.7e-135 485.0 405 60.2
Medtr8g044030 Medicago truncatula HOM05D006754 ORTHO05D008403 5.7e-135 485.0 424 59.0
arahy.Tifrunner.gnm1.ann1.826T7K Arachis hypogaea HOM05D006754 ORTHO05D008403 3.7e-134 482.3 403 62.8
EL10Ac7g16047 Beta vulgaris HOM05D006754 ORTHO05D008403 3.7e-134 482.3 398 60.8
Lj3g0006516 Lotus japonicus HOM05D006754 ORTHO05D008403 4.8e-134 481.9 402 61.2
Nitab4.5_0007132g0020 Nicotiana tabacum HOM05D006754 ORTHO05D008403 3.1e-133 479.2 289 78.9
THA.LOC104799439 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 5.3e-133 478.4 405 59.8
SalBow7G4834 Salvia bowleyana HOM05D006754 ORTHO05D008403 7.0e-133 478.0 401 62.8
SalBow7G2225 Salvia bowleyana HOM05D006754 ORTHO05D008403 1.5e-132 476.9 401 62.6
ClCG03G001330 Citrullus lanatus HOM05D006754 ORTHO05D008403 1.0e-131 474.2 379 63.1
Nitab4.5_0000272g0070 Nicotiana tabacum HOM05D006754 ORTHO05D008403 5.0e-131 471.9 272 81.6
THA.LOC104814881 Tarenaya hassleriana HOM05D006754 ORTHO05D008403 1.1e-130 470.7 403 59.3
Thhalv10015639m.g Eutrema salsugineum HOM05D006754 ORTHO05D008403 1.9e-130 469.9 398 59.8
Ah.15g097770 Amaranthus hybridus HOM05D006754 ORTHO05D008403 1.6e-129 466.8 401 59.9
FAN21G1313 Fragaria x ananassa HOM05D006754 ORTHO05D008403 2.1e-129 466.5 399 60.9
Sed0002230 Sechium edule HOM05D006754 ORTHO05D008403 3.6e-129 465.7 368 62.5
AUR62001757 Chenopodium quinoa HOM05D006754 ORTHO05D008403 8.0e-129 464.5 402 58.2
CANSAT56G3630 Cannabis sativa HOM05D006754 ORTHO05D008403 1.0e-128 464.2 407 60.4
AT5G59500 Arabidopsis thaliana HOM05D006754 ORTHO05D008403 6.7e-128 461.5 397 58.2
CARHR285870 Cardamine hirsuta HOM05D006754 ORTHO05D008403 4.8e-126 455.3 397 58.7
Aa31LG1G11840 Aethionema arabicum HOM05D006754 ORTHO05D008403 6.3e-126 454.9 387 60.2
Sp6g21200 Schrenkiella parvula HOM05D006754 ORTHO05D008403 1.1e-125 454.1 398 58.5
AL8G35980 Arabidopsis lyrata HOM05D006754 ORTHO05D008403 1.4e-125 453.8 393 59.3
Peaxi162Scf00122g00144 Petunia axillaris HOM05D006754 ORTHO05D008403 7.0e-125 451.4 390 59.5
AUR62009543 Chenopodium quinoa HOM05D006754 ORTHO05D008403 1.3e-123 447.2 402 56.7
Carub.0008s2018 Capsella rubella HOM05D006754 ORTHO05D008403 3.8e-123 445.7 401 59.6
Dinv22095 Davidia involucrata HOM05D006754 ORTHO05D008403 8.5e-123 444.5 250 83.2
BraA10t43752Z Brassica rapa HOM05D006754 ORTHO05D008403 3.2e-122 442.6 396 58.6
unitig_37.g12673 Utricularia gibba HOM05D006754 ORTHO05D008403 1.2e-121 440.7 386 58.3
BcaC04g19764 Brassica carinata HOM05D006754 ORTHO05D008403 1.0e-120 437.6 396 58.1
C09p51900 Brassica napus HOM05D006754 ORTHO05D008403 1.0e-120 437.6 396 58.1
BolC9t58053H Brassica oleracea HOM05D006754 ORTHO05D008403 1.0e-120 437.6 396 58.1
A10p16710 Brassica napus HOM05D006754 ORTHO05D008403 4.0e-120 435.6 396 57.8
CDE04G0725 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 1.7e-118 430.3 325 64.0
BcaB08g36252 Brassica carinata HOM05D006754 ORTHO05D008403 2.8e-118 429.5 395 56.7
MBI14_g12133_MAGBIO Magnolia biondii HOM05D006754 ORTHO05D008403 1.1e-117 427.6 376 60.6
CDE07G0060 Ceratophyllum demersum HOM05D006754 ORTHO05D008403 5.9e-116 421.8 318 62.9
Sed0016816 Sechium edule HOM05D006754 ORTHO05D008403 8.5e-115 417.9 398 55.3
SGA_v2.0_scaffold51G18718 Striga asiatica HOM05D006754 ORTHO05D008403 3.2e-114 416.0 396 55.3
Duzib168G0850 Durio zibethinus HOM05D006754 ORTHO05D008403 2.7e-113 412.9 245 77.1
Gohir.D05G094600 Gossypium hirsutum HOM05D006754 ORTHO05D008403 7.5e-111 404.8 325 60.9
Oeu004165.1 Olea europaea HOM05D006754 ORTHO05D008403 5.9e-108 395.2 357 57.4
ATR0752G045 Amborella trichopoda HOM05D006754 ORTHO05D008403 1.0e-107 394.4 285 66.0
Lalb_Chr01g0007611 Lupinus albus HOM05D006754 ORTHO05D008403 6.8e-104 381.7 402 51.0
Dinv09390 Davidia involucrata HOM05D006754 ORTHO05D008403 2.6e-103 379.8 215 83.7
GSVIVG01024926001 Vitis vinifera HOM05D006754 ORTHO05D008403 1.4e-96 357.5 399 52.1
TPR.G35751 Trifolium pratense HOM05D006754 ORTHO05D008403 4.0e-80 302.8 400 44.8
ECA236G3563 Erigeron canadensis HOM05D006754 ORTHO05D008403 8.7e-67 258.5 148 78.4
Pp3c1_41830 Physcomitrium patens HOM05D006754 ORTHO05D008403 2.4e-61 240.4 400 37.0
Mapoly0044s0017 Marchantia polymorpha HOM05D006754 ORTHO05D008403 1.2e-55 221.5 373 35.4
AagrBONN_evm.TU.Sc2ySwM_368.2585 Anthoceros agrestis HOM05D006754 ORTHO05D008403 2.5e-50 203.8 325 37.5
Aqoxy2G02265 Aquilegia oxysepala HOM05D006754 ORTHO05D008403 4.3e-50 203.0 205 54.6
Nn4g26458 Nelumbo nucifera HOM05D006754 ORTHO05D008403 7.4e-50 202.2 119 73.9
SMO356G0015 Selaginella moellendorffii HOM05D006754 ORTHO05D008403 2.6e-47 193.7 270 40.0
HPP92_027965 Vanilla planifolia HOM05D006754 ORTHO05D008403 4.5e-47 193.0 228 44.7
C03p13670 Brassica napus HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 67.2
BolC3t13816H Brassica oleracea HOM05D006754 ORTHO05D008403 3.5e-44 183.3 131 67.2
MD11G1097300 Malus domestica HOM05D006754 ORTHO05D008403 1.6e-36 157.9 199 47.7
Dinv06263 Davidia involucrata HOM05D006754 ORTHO05D008403 7.9e-36 155.6 98 81.6
BcaB05g22514 Brassica carinata HOM05D006754 ORTHO05D008403 1.5e-31 141.4 157 47.8
HPP92_001678 Vanilla planifolia HOM05D006754 ORTHO05D008403 2.9e-30 137.1 169 44.4
CBR_g46210 Chara braunii HOM05D006754 ORTHO05D008403 2.4e-24 117.5 297 30.0
SEGI_33641 Sequoiadendron giganteum HOM05D006754 ORTHO05D008403 1.5e-23 114.8 209 33.5
BcaC03g14007 Brassica carinata HOM05D006754 ORTHO05D008403 1.3e-09 68.6 94 47.9
C02p12450 Brassica napus HOM05D006754 ORTHO05D008403 1.3e-09 68.6 90 50.0
Cre01.g049750 Chlamydomonas reinhardtii HOM05D006754 ORTHO05D008403 1.7e-09 68.2 219 29.7


User provided reference genes

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