Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030670 Camellia sinensis var. sinensis HOM05D007655 ORTHO05D009698 1.6e-77 293.1 198 100.0
Hma1.2p1_0523F.1_g172110 Hydrangea macrophylla HOM05D007655 ORTHO05D009698 1.8e-49 199.9 195 75.4
Actinidia00669 Actinidia chinensis HOM05D007655 ORTHO05D009698 2.9e-47 192.6 176 58.5
Cc00_g02280 Coffea canephora HOM05D007655 ORTHO05D009698 5.1e-44 181.8 190 64.7
Haze_22616 Corylus avellana HOM05D007655 ORTHO05D009698 3.3e-43 179.1 191 65.4
Cfa013933 Carpinus fangiana HOM05D007655 ORTHO05D009698 2.8e-42 176.0 197 60.4
CAN.G1161.24 Capsicum annuum HOM05D007655 ORTHO05D009698 3.8e-39 165.6 193 56.0
Nitab4.5_0002701g0030 Nicotiana tabacum HOM05D007655 ORTHO05D009698 5.5e-38 161.8 198 60.6
DCAR_029510 Daucus carota HOM05D007655 ORTHO05D009698 1.4e-36 157.1 193 44.0
Manes.09G163100 Manihot esculenta HOM05D004613 ORTHO05D006095 1.8e-36 156.8 196 66.8
AT3G56030 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 2.2e-34 149.8 193 54.4
C08p31340 Brassica napus HOM05D007655 ORTHO05D009698 2.2e-34 149.8 187 61.5
BolC8t50755H Brassica oleracea HOM05D007655 ORTHO05D009698 2.2e-34 149.8 187 61.5
A09p48980 Brassica napus HOM05D007655 ORTHO05D009698 8.2e-34 147.9 187 61.5
BraA09t40353Z Brassica rapa HOM05D007655 ORTHO05D009698 8.2e-34 147.9 187 61.5
CiPaw.02G194200 Carya illinoinensis HOM05D007655 ORTHO05D009698 4.1e-33 145.6 197 59.4
Carub.0005s2276 Capsella rubella HOM05D007655 ORTHO05D009698 7.0e-33 144.8 187 58.3
MSTRG.197 Avicennia marina HOM05D007655 ORTHO05D009698 3.5e-32 142.5 189 41.8
Sp5g06510 Schrenkiella parvula HOM05D007655 ORTHO05D009698 5.9e-32 141.7 190 58.9
AL5G37300 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 1.7e-31 140.2 184 57.1
HanXRQChr09g0253251 Helianthus annuus HOM05D007655 ORTHO05D009698 1.1e-30 137.5 191 51.3
FAN06G4929 Fragaria x ananassa HOM05D007655 ORTHO05D009698 2.5e-30 136.3 191 63.9
Atru.chr12.88 Acer truncatum HOM05D007655 ORTHO05D009698 9.4e-30 134.4 197 41.1
FAN01G0024 Fragaria x ananassa HOM05D007655 ORTHO05D009698 9.4e-30 134.4 196 62.8
FvH4_7g24790 Fragaria vesca HOM05D007655 ORTHO05D009698 1.2e-29 134.0 191 63.4
Potri.008G141700 Populus trichocarpa HOM05D007655 ORTHO05D009698 1.8e-28 130.2 176 42.0
Gohir.A06G170600 Gossypium hirsutum HOM05D007655 ORTHO05D009698 2.3e-28 129.8 188 61.7
CARHR166100 Cardamine hirsuta HOM05D007655 ORTHO05D009698 4.0e-28 129.0 181 60.2
Thhalv10006093m.g Eutrema salsugineum HOM05D007655 ORTHO05D009698 6.7e-28 128.3 190 57.4
Phvul.004G132400 Phaseolus vulgaris HOM05D007655 ORTHO05D009698 6.7e-28 128.3 186 56.5
Ca_19338_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 2.0e-27 126.7 187 46.0
PGR044G0328 Punica granatum HOM05D007655 ORTHO05D009698 3.3e-27 125.9 178 62.4
Aa31LG5G19330 Aethionema arabicum HOM05D007655 ORTHO05D009698 3.7e-26 122.5 195 51.8
Lalb_Chr03g0033351 Lupinus albus HOM05D007655 ORTHO05D009698 8.2e-26 121.3 187 36.9
Psat1g113880 Pisum sativum HOM05D007655 ORTHO05D009698 1.1e-25 120.9 186 31.2
Medtr6g065100 Medicago truncatula HOM05D007655 ORTHO05D009698 1.8e-25 120.2 186 53.2
Prupe.2G253200 Prunus persica HOM05D000815 ORTHO05D000636 3.1e-25 119.4 164 62.8
FAN03G2547 Fragaria x ananassa HOM05D007655 ORTHO05D009698 4.1e-25 119.0 191 60.2
FAN10G0222 Fragaria x ananassa HOM05D007655 ORTHO05D009698 5.3e-25 118.6 191 60.2
Lj2g0024512 Lotus japonicus HOM05D007655 ORTHO05D009698 2.0e-24 116.7 182 58.2
Rhsim09G0178900 Rhododendron simsii HOM05D007655 ORTHO05D009698 3.5e-24 115.9 76 80.3
TPR.G40357 Trifolium pratense HOM05D007655 ORTHO05D009698 1.0e-23 114.4 186 31.2
ECA232G4997 Erigeron canadensis HOM05D007655 ORTHO05D009698 4.2e-22 109.0 189 57.1
Lj1P959T25 Lonicera japonica HOM05D007655 ORTHO05D009698 5.5e-22 108.6 83 65.1
vmacro10028 Vaccinium macrocarpon HOM05D007655 ORTHO05D009698 7.2e-22 108.2 71 74.6
Thecc.10G013100 Theobroma cacao HOM05D007655 ORTHO05D009698 2.1e-21 106.7 82 62.2
TWI09G1069 Tripterygium wilfordii HOM05D007655 ORTHO05D009698 2.7e-21 106.3 81 64.2
THA.LOC104810115 Tarenaya hassleriana HOM05D007655 ORTHO05D009698 1.0e-20 104.4 81 60.5
VMungo0464G0151 Vigna mungo HOM05D007655 ORTHO05D009698 1.0e-20 104.4 185 53.5
Nn2g13207 Nelumbo nucifera HOM05D007655 ORTHO05D009698 1.8e-20 103.6 190 56.3
CARHR135280 Cardamine hirsuta HOM05D007655 ORTHO05D009698 8.8e-20 101.3 81 58.0
Ca_25253_v3 Cicer arietinum L. HOM05D007655 ORTHO05D009698 8.8e-20 101.3 168 32.7
QL08p063505 Quercus lobata HOM05D007655 ORTHO05D009698 1.2e-19 100.9 192 53.1
Glyma.09G157400 Glycine max HOM05D007655 ORTHO05D009698 1.5e-19 100.5 186 54.3
TAR623G1347 Trochodendron aralioides HOM05D007655 ORTHO05D009698 2.6e-19 99.8 191 58.1
TAR131G0001 Trochodendron aralioides HOM05D007655 ORTHO05D009698 3.4e-19 99.4 191 58.1
Solyc03g095960.1 Solanum lycopersicum HOM05D007655 ORTHO05D009698 4.4e-19 99.0 81 58.0
AL4G37960 Arabidopsis lyrata HOM05D007655 ORTHO05D009698 7.5e-19 98.2 81 55.6
Nitab4.5_0006468g0020 Nicotiana tabacum HOM05D007655 ORTHO05D009698 3.7e-18 95.9 82 54.9
PGSC0003DMG400027723 Solanum tuberosum HOM05D007655 ORTHO05D009698 3.7e-18 95.9 80 56.2
Sopen03g025960 Solanum pennellii HOM05D007655 ORTHO05D009698 4.8e-18 95.5 80 56.2
Aa31LG10G10970 Aethionema arabicum HOM05D007655 ORTHO05D009698 6.3e-18 95.1 79 58.2
AT2G40240 Arabidopsis thaliana HOM05D007655 ORTHO05D009698 1.1e-17 94.4 81 53.1
Lalb_Chr19g0131421 Lupinus albus HOM05D007655 ORTHO05D009698 3.1e-17 92.8 167 31.1
Carub.0004s2246 Capsella rubella HOM05D007655 ORTHO05D009698 5.4e-17 92.0 81 54.3
MBI15_g28821_MAGBIO Magnolia biondii HOM05D007655 ORTHO05D009698 5.4e-17 92.0 197 49.7
Cpa.g.sc19.153 Carica papaya HOM05D007655 ORTHO05D009698 1.6e-16 90.5 77 62.3
COL.COLO4_06431 Corchorus olitorius HOM05D007655 ORTHO05D009698 1.6e-16 90.5 81 56.8
RcHm_v2.0_Chr1g0370651 Rosa chinensis HOM05D007655 ORTHO05D009698 1.6e-16 90.5 195 51.3
Sc14g0002050 Simmondsia chinensis HOM05D007655 ORTHO05D009698 2.0e-16 90.1 80 53.8
Aqoxy3G03604 Aquilegia oxysepala HOM05D007655 ORTHO05D009698 3.8e-15 85.9 77 54.5
Gohir.D06G178400 Gossypium hirsutum HOM05D007655 ORTHO05D009698 3.8e-15 85.9 162 60.5
CANSAT56G4119 Cannabis sativa HOM05D007655 ORTHO05D009698 4.2e-14 82.4 77 54.5
Gorai.N006800 Gossypium raimondii HOM05D007655 ORTHO05D009698 4.2e-14 82.4 162 59.9
Sopen03g025950 Solanum pennellii HOM05D007655 ORTHO05D009698 1.4e-12 77.4 66 56.1
Migut.F01479 Erythranthe guttata HOM05D007655 ORTHO05D009698 1.2e-11 74.3 189 48.7
GSVIVG01032781001 Vitis vinifera HOM05D007655 ORTHO05D009698 4.4e-11 72.4 44 81.8
arahy.Tifrunner.gnm1.ann1.P4Y6YZ Arachis hypogaea HOM05D000585 ORTHO05D001841 8.3e-10 68.2 68 42.6
Peaxi162Scf00304g00006 Petunia axillaris HOM05D007655 ORTHO05D009698 1.1e-09 67.8 154 29.9
Duzib106G0934 Durio zibethinus HOM05D007655 ORTHO05D009698 2.4e-09 66.6 60 56.7
Lsat_1_v5_gn_9_61061 Lactuca sativa HOM05D007655 ORTHO05D009698 5.4e-09 65.5 52 57.7
Ciclev10033792m.g Citrus clementina HOM05D007655 ORTHO05D000636 7.0e-09 65.1 49 65.3
Oeu029071.1 Olea europaea HOM05D007655 ORTHO05D009698 1.9e-06 57.0 50 52.0


User provided reference genes

Program Settings