Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030630 Camellia sinensis var. sinensis HOM05D001832 ORTHO05D001861 1.1e-104 383.3 186 100.0
CSS0034033 Camellia sinensis var. sinensis HOM05D001832 ORTHO05D001861 1.2e-82 310.1 159 94.3
vmacro07641 Vaccinium macrocarpon HOM05D001832 ORTHO05D001861 4.8e-36 155.2 163 56.4
Rhsim03G0046300 Rhododendron simsii HOM05D001832 ORTHO05D001861 6.3e-36 154.8 149 59.1
Rhsim08G0193100 Rhododendron simsii HOM05D001832 ORTHO05D001861 4.5e-34 148.7 152 62.5
Duzib128G0789 Durio zibethinus HOM05D001832 ORTHO05D001861 4.4e-29 132.1 146 51.4
Atru.chr2.1562 Acer truncatum HOM05D001832 ORTHO05D001861 2.2e-28 129.8 166 47.6
Manes.08G151500 Manihot esculenta HOM05D001832 ORTHO05D001861 2.8e-28 129.4 148 51.4
Haze_20389 Corylus avellana HOM05D001832 ORTHO05D001861 1.2e-26 124.0 155 47.7
Thecc.05G240200 Theobroma cacao HOM05D001832 ORTHO05D001861 1.2e-26 124.0 143 51.7
Peaxi162Scf00575g00213 Petunia axillaris HOM05D001832 ORTHO05D001861 1.6e-26 123.6 147 49.0
Thecc.05G239700 Theobroma cacao HOM05D001832 ORTHO05D001861 1.6e-26 123.6 143 51.7
Cfa019868 Carpinus fangiana HOM05D001832 ORTHO05D001861 2.0e-26 123.2 152 50.0
Manes.08G151711 Manihot esculenta HOM05D001832 ORTHO05D001861 2.7e-26 122.9 159 46.5
Oeu044204.1 Olea europaea HOM05D001832 ORTHO05D001861 4.5e-26 122.1 146 45.9
Manes.08G151600 Manihot esculenta HOM05D001832 ORTHO05D001861 7.7e-26 121.3 151 48.3
Ciclev10033414m.g Citrus clementina HOM05D001832 ORTHO05D001861 1.0e-25 120.9 172 41.9
Prupe.7G017500 Prunus persica HOM05D001832 ORTHO05D001861 5.0e-25 118.6 149 48.3
TWI60G0618 Tripterygium wilfordii HOM05D001832 ORTHO05D001861 1.1e-24 117.5 145 49.0
QL07p016717 Quercus lobata HOM05D001832 ORTHO05D001861 1.5e-24 117.1 149 48.3
Nitab4.5_0000613g0080 Nicotiana tabacum HOM05D001832 ORTHO05D001861 1.9e-24 116.7 147 46.9
PGR042G3786 Punica granatum HOM05D001832 ORTHO05D001861 2.5e-24 116.3 152 47.4
HanXRQChr06g0166471 Helianthus annuus HOM05D001832 ORTHO05D001861 4.2e-24 115.5 175 39.4
TAR636G1376 Trochodendron aralioides HOM05D001832 ORTHO05D001861 7.2e-24 114.8 152 45.4
DCAR_020642 Daucus carota HOM05D001832 ORTHO05D001861 2.8e-23 112.8 146 45.2
Gorai.013G113200 Gossypium raimondii HOM05D001832 ORTHO05D001861 4.7e-23 112.1 164 42.7
Eucgr.A00041 Eucalyptus grandis HOM05D001832 ORTHO05D001861 6.1e-23 111.7 145 49.0
Gohir.D13G101100 Gossypium hirsutum HOM05D001832 ORTHO05D001861 6.1e-23 111.7 163 42.3
HanXRQChr06g0166481 Helianthus annuus HOM05D001832 ORTHO05D001861 6.1e-23 111.7 152 42.8
Glyma.03G007100 Glycine max HOM05D001832 ORTHO05D001861 1.0e-22 110.9 142 48.6
MSTRG.26207 Avicennia marina HOM05D001832 ORTHO05D001861 2.3e-22 109.8 176 43.8
Cpa.g.sc73.7 Carica papaya HOM05D001832 ORTHO05D001861 4.0e-22 109.0 151 45.0
PSO339G0620 Papaver somniferum HOM05D001832 ORTHO05D001861 5.2e-22 108.6 164 45.1
Nn2g14621 Nelumbo nucifera HOM05D001832 ORTHO05D001861 1.2e-21 107.5 143 46.2
Lsat_1_v5_gn_3_10740 Lactuca sativa HOM05D001832 ORTHO05D001861 2.0e-21 106.7 148 43.2
Solyc10g081450.2 Solanum lycopersicum HOM05D001832 ORTHO05D001861 3.4e-21 105.9 146 41.8
Sopen10g031950 Solanum pennellii HOM05D001832 ORTHO05D001861 3.4e-21 105.9 146 41.8
FAN27G1476 Fragaria x ananassa HOM05D001832 ORTHO05D001861 4.4e-21 105.5 146 41.8
Lj1g0026584 Lotus japonicus HOM05D001832 ORTHO05D001861 4.4e-21 105.5 144 42.4
VMungo1383G2186 Vigna mungo HOM05D001832 ORTHO05D001861 4.4e-21 105.5 146 43.2
FAN15G1900 Fragaria x ananassa HOM05D001832 ORTHO05D001861 1.3e-20 104.0 146 41.8
CsaV3_3G039340 Cucumis sativus L. HOM05D001832 ORTHO05D001861 2.2e-20 103.2 120 51.7
PSO386G0276 Papaver somniferum HOM05D001832 ORTHO05D001861 3.7e-20 102.4 175 41.1
Sc07g0007640 Simmondsia chinensis HOM05D001832 ORTHO05D001861 4.9e-20 102.1 143 43.4
BcaB08g36745 Brassica carinata HOM05D001832 ORTHO05D001861 6.3e-20 101.7 144 42.4
CANSAT78G0961 Cannabis sativa HOM05D001832 ORTHO05D001861 6.3e-20 101.7 132 45.5
Duzib177G0898 Durio zibethinus HOM05D001832 ORTHO05D001861 1.4e-19 100.5 148 44.6
Sp6g26470 Schrenkiella parvula HOM05D001832 ORTHO05D001861 1.4e-19 100.5 149 43.0
Phvul.001G107200 Phaseolus vulgaris HOM05D001832 ORTHO05D001861 2.4e-19 99.8 142 44.4
A10p21670 Brassica napus HOM05D001832 ORTHO05D001861 4.1e-19 99.0 161 41.0
Lj1C1069T12 Lonicera japonica HOM05D001832 ORTHO05D001861 4.1e-19 99.0 153 45.1
PGSC0003DMG400028124 Solanum tuberosum HOM05D001832 ORTHO05D001861 4.1e-19 99.0 146 40.4
FvH4_2g19930 Fragaria vesca HOM05D001832 ORTHO05D001861 5.4e-19 98.6 143 40.6
FAN24G0644 Fragaria x ananassa HOM05D001832 ORTHO05D001861 5.4e-19 98.6 143 40.6
ATR0068G068 Amborella trichopoda HOM05D001832 ORTHO05D001861 7.0e-19 98.2 142 43.7
arahy.Tifrunner.gnm1.ann1.635IPP Arachis hypogaea HOM05D001832 ORTHO05D001861 7.0e-19 98.2 144 43.1
BraA10t44229Z Brassica rapa HOM05D001832 ORTHO05D001861 7.0e-19 98.2 160 40.6
THA.LOC104827251 Tarenaya hassleriana HOM05D001832 ORTHO05D001861 9.2e-19 97.8 154 44.8
Ciclev10031584m.g Citrus clementina HOM05D001832 ORTHO05D001861 1.2e-18 97.4 146 43.8
MELO3C009679.2 Cucumis melo HOM05D001832 ORTHO05D001861 1.2e-18 97.4 137 45.3
RcHm_v2.0_Chr3g0495891 Rosa chinensis HOM05D001832 ORTHO05D001861 1.6e-18 97.1 147 42.9
Migut.K00218 Erythranthe guttata HOM05D001832 ORTHO05D001861 2.0e-18 96.7 165 39.4
C09p59400 Brassica napus HOM05D001832 ORTHO05D001597 2.7e-18 96.3 143 42.7
Psat3g085520 Pisum sativum HOM05D001832 ORTHO05D001861 2.7e-18 96.3 142 45.1
BolC9t58779H Brassica oleracea HOM05D001832 ORTHO05D001597 3.5e-18 95.9 143 42.7
arahy.Tifrunner.gnm1.ann1.T7IL5E Arachis hypogaea HOM05D001832 ORTHO05D001861 5.9e-18 95.1 144 41.7
Thhalv10013634m.g Eutrema salsugineum HOM05D001832 ORTHO05D001861 5.9e-18 95.1 146 41.1
Hund15182 Selenicereus undatus HOM05D001832 ORTHO05D001861 7.8e-18 94.7 144 41.7
ClCG10G017050 Citrullus lanatus HOM05D001832 ORTHO05D001861 2.3e-17 93.2 138 44.9
Gorai.011G272800 Gossypium raimondii HOM05D001832 ORTHO05D001861 2.3e-17 93.2 138 43.5
Gorai.013G196600 Gossypium raimondii HOM05D001832 ORTHO05D001861 2.3e-17 93.2 138 42.8
Duzib128G0124 Durio zibethinus HOM05D001832 ORTHO05D001861 3.9e-17 92.4 181 37.6
Gohir.D13G165900 Gossypium hirsutum HOM05D001832 ORTHO05D001861 3.9e-17 92.4 138 42.0
HPP92_028188 Vanilla planifolia HOM05D001832 ORTHO05D001861 3.9e-17 92.4 143 42.0
Gohir.D10G238396 Gossypium hirsutum HOM05D001832 ORTHO05D001861 5.0e-17 92.0 138 42.8
Dinv14566 Davidia involucrata HOM05D001832 ORTHO05D001861 6.6e-17 91.7 116 52.6
AT5G17780 Arabidopsis thaliana HOM05D001832 ORTHO05D001861 8.6e-17 91.3 146 40.4
Sed0023868 Sechium edule HOM05D001832 ORTHO05D001861 2.5e-16 89.7 156 37.8
COL.COLO4_04824 Corchorus olitorius HOM05D001832 ORTHO05D001861 3.3e-16 89.4 142 40.1
Medtr7g087070 Medicago truncatula HOM05D001832 ORTHO05D001861 4.3e-16 89.0 149 39.6
AL6G28870 Arabidopsis lyrata HOM05D001832 ORTHO05D001861 7.3e-16 88.2 143 40.6
CARHR195390 Cardamine hirsuta HOM05D001832 ORTHO05D001861 7.3e-16 88.2 169 37.9
HPP92_014372 Vanilla planifolia HOM05D001832 ORTHO05D001861 1.6e-15 87.0 144 41.0
TPR.G7840 Trifolium pratense HOM05D001832 ORTHO05D001861 2.1e-15 86.7 142 40.1
Aa31LG11G11800 Aethionema arabicum HOM05D001832 ORTHO05D001861 8.0e-15 84.7 162 38.3
Carub.0006s1601 Capsella rubella HOM05D001832 ORTHO05D001861 1.8e-14 83.6 144 37.5
unitig_746.g26558 Utricularia gibba HOM05D001832 ORTHO05D001861 1.5e-13 80.5 165 36.4
Zm00001eb331070 Zea mays HOM05D001832 ORTHO05D001861 9.8e-13 77.8 152 37.5
AT5G17720 Arabidopsis thaliana HOM05D001832 ORTHO05D001861 2.9e-12 76.3 172 34.9
Ca_03445_v3 Cicer arietinum L. HOM05D001832 ORTHO05D001861 3.7e-12 75.9 146 40.4
AL6G28810 Arabidopsis lyrata HOM05D001832 ORTHO05D001861 8.3e-12 74.7 168 34.5
AUR62037058 Chenopodium quinoa HOM05D001832 ORTHO05D001861 1.4e-11 73.9 133 39.8
SalBow1G0057 Salvia bowleyana HOM05D001832 ORTHO05D001861 3.2e-11 72.8 140 33.6
THA.LOC104820804 Tarenaya hassleriana HOM05D001832 ORTHO05D001861 3.2e-11 72.8 160 37.5
Os07g0685500 Oryza sativa ssp. japonica HOM05D001832 ORTHO05D001861 4.1e-11 72.4 127 37.8
Sp6g26500 Schrenkiella parvula HOM05D001832 ORTHO05D001861 1.2e-10 70.9 158 36.1
A10p21700 Brassica napus HOM05D001832 ORTHO05D001861 2.7e-10 69.7 146 37.0
BraA10t44231Z Brassica rapa HOM05D001832 ORTHO05D001861 2.7e-10 69.7 146 37.0
BcaB08g36748 Brassica carinata HOM05D001832 ORTHO05D001861 3.5e-10 69.3 149 37.6
BcaC04g18764 Brassica carinata HOM05D001832 ORTHO05D001861 6.0e-10 68.6 146 37.0
BolC9t58783H Brassica oleracea HOM05D001832 ORTHO05D001861 6.0e-10 68.6 146 37.0
C09p59430 Brassica napus HOM05D001832 ORTHO05D001861 1.3e-09 67.4 146 36.3
CDE06G2015 Ceratophyllum demersum HOM05D001832 ORTHO05D001861 1.7e-09 67.0 116 40.5
CARHR195460 Cardamine hirsuta HOM05D001832 ORTHO05D001861 2.3e-09 66.6 180 31.7
Aa31LG11G11830 Aethionema arabicum HOM05D001832 ORTHO05D001861 1.9e-08 63.5 132 36.4
Aa31LG11G11840 Aethionema arabicum HOM05D001832 ORTHO05D001861 3.3e-08 62.8 152 34.9
Thhalv10015368m.g Eutrema salsugineum HOM05D001832 ORTHO05D001861 7.3e-08 61.6 156 33.3
C02p09310 Brassica napus HOM05D001832 ORTHO05D001861 1.2e-07 60.8 141 35.5
BolC2t06839H Brassica oleracea HOM05D001832 ORTHO05D001861 1.2e-07 60.8 141 35.5
Lalb_Chr22g0358471 Lupinus albus HOM05D001832 ORTHO05D001861 6.2e-07 58.5 74 47.3
Glyma.03G007050 Glycine max HOM05D001832 ORTHO05D001861 8.0e-07 58.2 66 45.5
HanXRQChr13g0414311 Helianthus annuus HOM05D001832 ORTHO05D001861 4.0e-06 55.8 156 32.7
SEGI_14346 Sequoiadendron giganteum HOM05D001832 ORTHO05D001861 8.9e-06 54.7 126 31.7


User provided reference genes

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