Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030600 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 1.9e-38 162.2 87 100.0
CSS0030666 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.9e-23 111.7 68 94.1
CSS0042195 Camellia sinensis var. sinensis HOM05D005813 ORTHO05D007310 2.9e-23 111.7 68 94.1
vmacro21010 Vaccinium macrocarpon HOM05D005813 ORTHO05D007310 4.0e-17 91.3 99 55.6
Nitab4.5_0004917g0040 Nicotiana tabacum HOM05D005813 ORTHO05D007310 2.9e-15 85.1 70 67.1
Dinv43710 Davidia involucrata HOM05D005813 ORTHO05D007310 1.9e-14 82.4 71 64.8
Lj7A528T62 Lonicera japonica HOM05D005813 ORTHO05D007310 3.0e-12 75.1 74 60.8
Peaxi162Scf00013g03441 Petunia axillaris HOM05D005813 ORTHO05D007310 1.9e-11 72.4 75 58.7
Solyc01g091310.3 Solanum lycopersicum HOM05D005813 ORTHO05D007310 4.3e-11 71.2 73 56.2
Actinidia12685 Actinidia chinensis HOM05D005813 ORTHO05D007310 5.6e-11 70.9 66 66.7
Manes.05G045300 Manihot esculenta HOM05D005813 ORTHO05D007310 5.6e-11 70.9 71 53.5
Cc02_g23900 Coffea canephora HOM05D005813 ORTHO05D007310 6.2e-10 67.4 76 59.2
MD02G1204700 Malus domestica HOM05D005813 ORTHO05D007310 1.1e-09 66.6 70 50.0
Nn1g01240 Nelumbo nucifera HOM05D005813 ORTHO05D007310 1.4e-09 66.2 68 51.5
GSVIVG01027606001 Vitis vinifera HOM05D005813 ORTHO05D007310 6.9e-09 63.9 72 56.9
MELO3C006191.2 Cucumis melo HOM05D005813 ORTHO05D007310 9.0e-09 63.5 71 54.9
THA.LOC104817009 Tarenaya hassleriana HOM05D005813 ORTHO05D007310 9.0e-09 63.5 74 55.4
AUR62013635 Chenopodium quinoa HOM05D005813 ORTHO05D007310 1.5e-08 62.8 73 50.7
Hund27345 Selenicereus undatus HOM05D005813 ORTHO05D007310 2.0e-08 62.4 73 52.1
Ciclev10020183m.g Citrus clementina HOM05D005813 ORTHO05D007310 2.6e-08 62.0 69 52.2
AUR62004213 Chenopodium quinoa HOM05D005813 ORTHO05D007310 4.4e-08 61.2 73 47.9
CARHR248130 Cardamine hirsuta HOM05D005813 ORTHO05D007310 5.8e-08 60.8 71 50.7
PGR031G3848 Punica granatum HOM05D005813 ORTHO05D007310 5.8e-08 60.8 72 51.4
MSTRG.17192 Avicennia marina HOM05D005813 ORTHO05D007310 7.6e-08 60.5 72 51.4
EL10Ac1g00888 Beta vulgaris HOM05D005813 ORTHO05D007310 7.6e-08 60.5 74 50.0
Duzib138G0196 Durio zibethinus HOM05D005813 ORTHO05D007310 7.6e-08 60.5 71 53.5
CsaV3_3G009700 Cucumis sativus L. HOM05D005813 ORTHO05D007310 1.3e-07 59.7 71 52.1
Sopen01g037050 Solanum pennellii HOM05D005813 ORTHO05D007310 1.3e-07 59.7 61 54.1
TAR374G0529 Trochodendron aralioides HOM05D005813 ORTHO05D007310 1.3e-07 59.7 70 48.6
Atru.chr5.306 Acer truncatum HOM05D005813 ORTHO05D007310 1.7e-07 59.3 72 51.4
MD07G1121300 Malus domestica HOM05D005813 ORTHO05D007310 1.7e-07 59.3 62 54.8
Migut.B01633 Erythranthe guttata HOM05D005813 ORTHO05D007310 2.2e-07 58.9 68 48.5
ClCG05G002290 Citrullus lanatus HOM05D005813 ORTHO05D007310 2.9e-07 58.5 71 52.1
Prupe.2G145000 Prunus persica HOM05D005813 ORTHO05D007310 2.9e-07 58.5 78 47.4
COL.COLO4_12543 Corchorus olitorius HOM05D005813 ORTHO05D007310 3.8e-07 58.2 71 52.1
Sc02g0002610 Simmondsia chinensis HOM05D005813 ORTHO05D007310 3.8e-07 58.2 72 48.6
TWI59G1428 Tripterygium wilfordii HOM05D005813 ORTHO05D007310 3.8e-07 58.2 72 51.4
Lsat_1_v5_gn_7_7160 Lactuca sativa HOM05D005813 ORTHO05D007310 6.4e-07 57.4 75 56.0
Nn4g26391 Nelumbo nucifera HOM05D005813 ORTHO05D007310 6.4e-07 57.4 68 50.0
FAN10G1195 Fragaria x ananassa HOM05D005813 ORTHO05D007310 1.1e-06 56.6 64 51.6
Lj1g0017617 Lotus japonicus HOM05D005813 ORTHO05D007310 2.4e-06 55.5 68 51.5
Ah.05g174210 Amaranthus hybridus HOM05D005813 ORTHO05D007310 3.2e-06 55.1 73 43.8
RcHm_v2.0_Chr1g0350521 Rosa chinensis HOM05D005813 ORTHO05D007310 3.2e-06 55.1 61 50.8
FvH4_7g11840 Fragaria vesca HOM05D005813 ORTHO05D007310 5.4e-06 54.3 61 52.5
FAN06G0614 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.4e-06 54.3 61 52.5
FAN06G1564 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.4e-06 54.3 61 52.5
FAN10G2798 Fragaria x ananassa HOM05D005813 ORTHO05D007310 5.4e-06 54.3 61 52.5
Eucgr.D02453 Eucalyptus grandis HOM05D005813 ORTHO05D007310 9.3e-06 53.5 72 48.6


User provided reference genes

Program Settings