Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030538 Camellia sinensis var. sinensis HOM05D067542 ORTHO05D111818 1.1e-34 149.4 74 100.0
CSS0009532 Camellia sinensis var. sinensis HOM05D067542 ORTHO05D109516 9.3e-31 136.3 74 93.2
CSS0040568 Camellia sinensis var. sinensis HOM05D000522 ORTHO05D000565 3.8e-08 61.2 33 84.8
Dinv44102 Davidia involucrata HOM05D000522 ORTHO05D000565 6.5e-08 60.5 38 71.1
Ca_23121_v3 Cicer arietinum L. HOM05D001289 ORTHO05D000565 5.5e-07 57.4 28 85.7
TWI59G0792 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 5.5e-07 57.4 28 82.1
Hund27389 Selenicereus undatus HOM05D000522 ORTHO05D000565 7.1e-07 57.0 28 82.1
Psat4g208800 Pisum sativum HOM05D000522 ORTHO05D000565 1.2e-06 56.2 28 82.1
Sc26g0001370 Simmondsia chinensis HOM05D006089 ORTHO05D007345 1.2e-06 56.2 28 82.1
DCAR_003012 Daucus carota HOM05D000522 ORTHO05D000565 1.6e-06 55.8 39 61.5
Manes.05G051200 Manihot esculenta HOM05D000522 ORTHO05D000565 1.6e-06 55.8 38 65.8
EL10Ac1g00813 Beta vulgaris HOM05D000522 ORTHO05D000565 2.7e-06 55.1 28 78.6
Eucgr.E01595 Eucalyptus grandis HOM05D000522 ORTHO05D000565 2.7e-06 55.1 38 63.2
QL04p035366 Quercus lobata HOM05D000522 ORTHO05D000565 2.7e-06 55.1 34 67.6
CANSAT21G0552 Cannabis sativa HOM05D000522 ORTHO05D000565 3.5e-06 54.7 38 63.2
MBI04_g37585_MAGBIO Magnolia biondii HOM05D000522 ORTHO05D000565 3.5e-06 54.7 28 75.0
TAR629G0620 Trochodendron aralioides HOM05D000522 ORTHO05D000565 3.5e-06 54.7 28 75.0
AUR62013705 Chenopodium quinoa HOM05D000522 ORTHO05D000565 4.6e-06 54.3 32 71.9
Glyma.03G117300 Glycine max HOM05D000522 ORTHO05D000565 4.6e-06 54.3 34 67.6
TWI81G0633 Tripterygium wilfordii HOM05D000522 ORTHO05D000565 4.6e-06 54.3 28 78.6
Aqoxy5G03853 Aquilegia oxysepala HOM05D000522 ORTHO05D000565 6.0e-06 53.9 40 57.5
Lsat_1_v5_gn_5_51821 Lactuca sativa HOM05D000522 ORTHO05D000565 6.0e-06 53.9 28 75.0
Phvul.010G055600 Phaseolus vulgaris HOM05D000522 ORTHO05D000565 6.0e-06 53.9 34 67.6
Thecc.03G249500 Theobroma cacao HOM05D000522 ORTHO05D000565 6.0e-06 53.9 28 75.0
VMungo0331G0208 Vigna mungo HOM05D000522 ORTHO05D000565 6.0e-06 53.9 34 67.6
Actinidia33489 Actinidia chinensis HOM05D000522 ORTHO05D000565 7.9e-06 53.5 34 67.6
ClCG05G016290 Citrullus lanatus HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Ciclev10020245m.g Citrus clementina HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
COL.COLO4_12455 Corchorus olitorius HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 78.6
CsaV3_4G036550 Cucumis sativus L. HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Migut.B01570 Erythranthe guttata HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Medtr8g005990 Medicago truncatula HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Nn8g39895 Nelumbo nucifera HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0
Sed0012273 Sechium edule HOM05D000522 ORTHO05D000565 7.9e-06 53.5 28 75.0


User provided reference genes

Program Settings