Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030533 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 1.3e-52 209.5 109 100.0
CSS0027374 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 1.1e-51 206.5 109 99.1
CSS0039429 Camellia sinensis var. sinensis HOM05D037602 ORTHO05D033921 2.0e-45 185.7 109 90.8
Actinidia01264 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.1e-19 100.1 75 74.7
Hma1.2p1_0544F.1_g175540 Hydrangea macrophylla HOM05D007238 ORTHO05D009206 3.1e-19 98.6 74 74.3
Lj8C334G11 Lonicera japonica HOM05D007238 ORTHO05D009206 1.1e-16 90.1 83 62.7
Dinv22874 Davidia involucrata HOM05D007238 ORTHO05D009206 3.3e-16 88.6 75 69.3
Dinv28012 Davidia involucrata HOM05D007238 ORTHO05D009206 1.2e-15 86.7 63 77.8
Thecc.03G317700 Theobroma cacao HOM05D007238 ORTHO05D009206 1.9e-11 72.8 75 57.3
Potri.003G103100 Populus trichocarpa HOM05D007238 ORTHO05D009206 2.4e-11 72.4 74 56.8
Atru.chr6.1480 Acer truncatum HOM05D007238 ORTHO05D009206 5.4e-11 71.2 91 53.8
DCAR_008182 Daucus carota HOM05D007238 ORTHO05D009206 3.9e-09 65.1 70 55.7
HanXRQChr03g0081381 Helianthus annuus HOM05D007238 ORTHO05D009206 6.6e-09 64.3 73 46.6
Prupe.5G020000 Prunus persica HOM05D007238 ORTHO05D009206 6.6e-09 64.3 75 50.7
Actinidia32774 Actinidia chinensis HOM05D007238 ORTHO05D009206 1.1e-08 63.5 66 57.6
TAR629G0677 Trochodendron aralioides HOM05D007238 ORTHO05D009206 1.5e-08 63.2 74 51.4
TWI36G0279 Tripterygium wilfordii HOM05D007238 ORTHO05D009206 2.5e-08 62.4 67 58.2
Haze_08066 Corylus avellana HOM05D007238 ORTHO05D009206 2.8e-07 58.9 73 50.7
Gohir.A12G202500 Gossypium hirsutum HOM05D007238 ORTHO05D009206 6.2e-07 57.8 84 47.6
Gohir.D12G205200 Gossypium hirsutum HOM05D007238 ORTHO05D009206 6.2e-07 57.8 84 47.6
Gorai.008G220100 Gossypium raimondii HOM05D007238 ORTHO05D009206 6.2e-07 57.8 84 47.6
Aqoxy3G02024 Aquilegia oxysepala HOM05D007238 ORTHO05D009206 1.1e-06 57.0 63 54.0
Sabra03G0070300 Salix brachista HOM05D007238 ORTHO05D009206 3.1e-06 55.5 74 45.9


User provided reference genes

Program Settings