Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030508 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 2.0e-64 248.8 118 100.0
CSS0044783 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 1.1e-46 189.9 109 82.6
CSS0001048 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 7.6e-27 124.0 96 66.7
CSS0003960 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D024698 5.3e-20 101.3 78 65.4
Actinidia22891 Actinidia chinensis HOM05D001842 ORTHO05D001849 3.9e-15 85.1 168 37.5
Rhsim10G0194400 Rhododendron simsii HOM05D001842 ORTHO05D001849 4.3e-14 81.6 177 33.9
CSS0024804 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 1.4e-12 76.6 191 33.5
Cpa.g.sc6.364 Carica papaya HOM05D001842 ORTHO05D001849 1.2e-11 73.6 173 32.4
Hma1.2p1_0085F.1_g044600 Hydrangea macrophylla HOM05D001842 ORTHO05D001849 9.9e-11 70.5 176 30.7
Dinv28318 Davidia involucrata HOM05D001842 ORTHO05D001849 2.9e-10 68.9 179 31.3
TWI09G0475 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 3.8e-10 68.6 174 32.2
HanXRQChr14g0442891 Helianthus annuus HOM05D001842 ORTHO05D001849 1.4e-09 66.6 145 34.5
Nitab4.5_0000467g0080 Nicotiana tabacum HOM05D001842 ORTHO05D001849 2.4e-09 65.9 171 31.6
Sed0023090 Sechium edule HOM05D001842 ORTHO05D001849 2.4e-09 65.9 167 29.9
Manes.01G155900 Manihot esculenta HOM05D001842 ORTHO05D001849 3.2e-09 65.5 173 31.2
CSS0024056 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D110517 7.1e-09 64.3 80 50.0
Dinv40195 Davidia involucrata HOM05D001842 ORTHO05D001849 7.1e-09 64.3 179 29.6
DCAR_016693 Daucus carota HOM05D001842 ORTHO05D001849 9.3e-09 63.9 172 31.4
TAR376G0454 Trochodendron aralioides HOM05D001842 ORTHO05D001849 2.7e-08 62.4 174 30.5
unitig_88.g27776 Utricularia gibba HOM05D001842 ORTHO05D001849 2.7e-08 62.4 166 30.7
PSO675G7298 Papaver somniferum HOM05D001842 ORTHO05D001849 4.6e-08 61.6 175 30.3
Atru.chr3.124 Acer truncatum HOM05D001842 ORTHO05D001849 6.0e-08 61.2 177 28.8
arahy.Tifrunner.gnm1.ann1.649J27 Arachis hypogaea HOM05D001842 ORTHO05D001849 6.0e-08 61.2 178 27.5
Nitab4.5_0001365g0070 Nicotiana tabacum HOM05D001842 ORTHO05D001849 6.0e-08 61.2 171 30.4
TWI53G0649 Tripterygium wilfordii HOM05D001842 ORTHO05D001849 6.0e-08 61.2 175 29.1
arahy.Tifrunner.gnm1.ann1.1FV09I Arachis hypogaea HOM05D001842 ORTHO05D001849 7.9e-08 60.8 178 28.1
CSS0030981 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D001849 7.9e-08 60.8 181 28.7
FvH4_2g16750 Fragaria vesca HOM05D001842 ORTHO05D001849 7.9e-08 60.8 171 29.2
FAN24G0597 Fragaria x ananassa HOM05D001842 ORTHO05D001849 7.9e-08 60.8 171 29.2
FAN27G0714 Fragaria x ananassa HOM05D001842 ORTHO05D001849 7.9e-08 60.8 171 29.2
MBI05_g33293_MAGBIO Magnolia biondii HOM05D001842 ORTHO05D001849 7.9e-08 60.8 179 28.5
TAR628G0545 Trochodendron aralioides HOM05D001842 ORTHO05D001849 7.9e-08 60.8 174 29.9
Ca_06502_v3 Cicer arietinum L. HOM05D001842 ORTHO05D001849 1.0e-07 60.5 181 28.7
MSTRG.15602 Avicennia marina HOM05D001842 ORTHO05D001849 1.3e-07 60.1 166 30.1
Sc05g0006840 Simmondsia chinensis HOM05D001842 ORTHO05D001849 1.3e-07 60.1 173 30.1
Aqoxy6G01606 Aquilegia oxysepala HOM05D001842 ORTHO05D001849 1.8e-07 59.7 172 30.2
Solyc02g038812.1 Solanum lycopersicum HOM05D001842 ORTHO05D001849 1.8e-07 59.7 171 27.5
Sopen02g012560 Solanum pennellii HOM05D001842 ORTHO05D001849 1.8e-07 59.7 171 30.4
Haze_02003 Corylus avellana HOM05D001842 ORTHO05D001849 2.3e-07 59.3 181 27.6
Lalb_Chr04g0246921 Lupinus albus HOM05D001842 ORTHO05D001849 2.3e-07 59.3 182 27.5
Oeu039712.1 Olea europaea HOM05D001842 ORTHO05D001849 2.3e-07 59.3 174 28.7
GSVIVG01023872001 Vitis vinifera HOM05D001842 ORTHO05D001849 2.3e-07 59.3 137 30.7
Glyma.02G311333 Glycine max HOM05D001842 ORTHO05D001849 3.9e-07 58.5 188 27.7
MD10G1140800 Malus domestica HOM05D001842 ORTHO05D001849 3.9e-07 58.5 171 28.7
Medtr5g099170 Medicago truncatula HOM05D001842 ORTHO05D001849 3.9e-07 58.5 182 29.1
Nn5g30998 Nelumbo nucifera HOM05D001842 ORTHO05D001849 3.9e-07 58.5 176 31.2
COL.COLO4_07475 Corchorus olitorius HOM05D001842 ORTHO05D001849 5.1e-07 58.2 99 36.4
MD05G1135500 Malus domestica HOM05D001842 ORTHO05D001849 5.1e-07 58.2 181 29.3
CiPaw.05G092800 Carya illinoinensis HOM05D001842 ORTHO05D001849 8.7e-07 57.4 171 28.7
ECA234G4380 Erigeron canadensis HOM05D001418 ORTHO05D002038 8.7e-07 57.4 27 85.2
Sabra05G0196200 Salix brachista HOM05D001842 ORTHO05D001849 8.7e-07 57.4 126 31.7
Glyma.14G001200 Glycine max HOM05D001842 ORTHO05D001849 1.1e-06 57.0 200 25.5
Cc07_g11940 Coffea canephora HOM05D001842 ORTHO05D001849 1.5e-06 56.6 166 30.1
Peaxi162Scf00580g00016 Petunia axillaris HOM05D001842 ORTHO05D001849 1.5e-06 56.6 170 30.0
SalBow5G1010 Salvia bowleyana HOM05D001842 ORTHO05D001849 2.5e-06 55.8 184 28.3
Sed0008264 Sechium edule HOM05D001842 ORTHO05D001849 2.5e-06 55.8 187 25.1
HanXRQChr09g0259431 Helianthus annuus HOM05D001842 ORTHO05D001849 3.3e-06 55.5 161 29.8
QL11p056280 Quercus lobata HOM05D001842 ORTHO05D001849 3.3e-06 55.5 177 28.8
CSS0043241 Camellia sinensis var. sinensis HOM05D020153 ORTHO05D001849 4.3e-06 55.1 24 87.5
vmacro20625 Vaccinium macrocarpon HOM05D001842 ORTHO05D001849 4.3e-06 55.1 22 95.5
CSS0039865 Camellia sinensis var. sinensis HOM05D001842 ORTHO05D024698 5.6e-06 54.7 23 91.3
CAN.G328.10 Capsicum annuum HOM05D001842 ORTHO05D001849 5.6e-06 54.7 171 27.5
Sopen02g027220 Solanum pennellii HOM05D001842 ORTHO05D001849 5.6e-06 54.7 189 28.6
Actinidia17353 Actinidia chinensis HOM05D001842 ORTHO05D001849 7.4e-06 54.3 22 95.5
Nitab4.5_0007782g0070 Nicotiana tabacum HOM05D001842 ORTHO05D001849 7.4e-06 54.3 188 29.8
CiPaw.06G115800 Carya illinoinensis HOM05D001842 ORTHO05D001849 9.6e-06 53.9 173 28.9
Nitab4.5_0001467g0060 Nicotiana tabacum HOM05D001842 ORTHO05D001849 9.6e-06 53.9 188 29.8
PSO541G1162 Papaver somniferum HOM05D001842 ORTHO05D001849 9.6e-06 53.9 22 95.5
Prupe.8G179600 Prunus persica HOM05D001842 ORTHO05D001849 9.6e-06 53.9 22 95.5


User provided reference genes

Program Settings