Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030489 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 7.8e-71 270.4 141 100.0
CSS0021882 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.5e-17 90.9 91 54.9
CSS0036042 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.1e-15 86.3 110 44.5
CSS0025035 Camellia sinensis var. sinensis HOM05D007219 ORTHO05D008995 5.7e-13 78.2 41 85.4
Actinidia07878 Actinidia chinensis HOM05D007219 ORTHO05D008995 8.2e-12 74.3 41 80.5
CSS0011556 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.1e-11 73.9 105 45.7
CSS0049721 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.8e-11 73.2 107 44.9
vmacro12114 Vaccinium macrocarpon HOM05D007219 ORTHO05D008995 1.8e-11 73.2 41 80.5
Hma1.2p1_0133F.1_g061230 Hydrangea macrophylla HOM05D007219 ORTHO05D008995 5.3e-11 71.6 41 75.6
Cc07_g19250 Coffea canephora HOM05D007219 ORTHO05D008995 9.1e-11 70.9 41 75.6
Peaxi162Scf00147g01822 Petunia axillaris HOM05D007219 ORTHO05D008995 1.2e-10 70.5 42 69.0
CiPaw.03G278000 Carya illinoinensis HOM05D007219 ORTHO05D008995 4.5e-10 68.6 41 70.7
QL08p028873 Quercus lobata HOM05D007219 ORTHO05D008995 5.9e-10 68.2 41 68.3
RcHm_v2.0_Chr2g0156861 Rosa chinensis HOM05D007219 ORTHO05D008995 5.9e-10 68.2 41 70.7
Dinv07849 Davidia involucrata HOM05D007219 ORTHO05D008995 1.0e-09 67.4 36 86.1
TAR626G0546 Trochodendron aralioides HOM05D007219 ORTHO05D008995 1.0e-09 67.4 41 68.3
FvH4_6g41300 Fragaria vesca HOM05D007219 ORTHO05D008995 1.3e-09 67.0 36 77.8
FAN02G0754 Fragaria x ananassa HOM05D007219 ORTHO05D008995 1.3e-09 67.0 36 77.8
MD09G1120700 Malus domestica HOM05D007219 ORTHO05D008995 1.3e-09 67.0 41 68.3
Sopen05g025870 Solanum pennellii HOM05D007219 ORTHO05D008995 1.3e-09 67.0 41 68.3
CANSAT64G0298 Cannabis sativa HOM05D007219 ORTHO05D008995 1.7e-09 66.6 42 64.3
CAN.G716.12 Capsicum annuum HOM05D007219 ORTHO05D008995 1.7e-09 66.6 41 68.3
MBI16_g42309_MAGBIO Magnolia biondii HOM05D007219 ORTHO05D008995 1.7e-09 66.6 41 63.4
FAN14G1895 Fragaria x ananassa HOM05D007219 ORTHO05D008995 2.2e-09 66.2 36 77.8
ATR0712G058 Amborella trichopoda HOM05D007219 ORTHO05D008995 2.9e-09 65.9 58 53.4
Nn1g03266 Nelumbo nucifera HOM05D007219 ORTHO05D008995 3.8e-09 65.5 41 61.0
Prupe.3G202800 Prunus persica HOM05D007219 ORTHO05D008995 3.8e-09 65.5 41 68.3
ECA234G4660 Erigeron canadensis HOM05D007219 ORTHO05D008995 5.0e-09 65.1 41 65.9
PGSC0003DMG400020758 Solanum tuberosum HOM05D007219 ORTHO05D008995 5.0e-09 65.1 41 65.9
Nitab4.5_0011106g0020 Nicotiana tabacum HOM05D007219 ORTHO05D008995 8.5e-09 64.3 41 65.9
Cpa.g.sc395.3 Carica papaya HOM05D007219 ORTHO05D008995 1.1e-08 63.9 41 68.3
Manes.12G083700 Manihot esculenta HOM05D007219 ORTHO05D008995 1.1e-08 63.9 36 75.0
Migut.M00020 Erythranthe guttata HOM05D007219 ORTHO05D008995 1.5e-08 63.5 36 75.0
Lalb_Chr22g0360881 Lupinus albus HOM05D007219 ORTHO05D008995 1.5e-08 63.5 41 65.9
Potri.014G161800 Populus trichocarpa HOM05D007219 ORTHO05D008995 1.5e-08 63.5 48 56.2
QL08p028923 Quercus lobata HOM05D007219 ORTHO05D008995 1.5e-08 63.5 41 63.4
Hund24148 Selenicereus undatus HOM05D007219 ORTHO05D008995 1.5e-08 63.5 36 72.2
Dinv05845 Davidia involucrata HOM05D007219 ORTHO05D008995 1.9e-08 63.2 41 70.7
Phvul.006G013300 Phaseolus vulgaris HOM05D007219 ORTHO05D008995 1.9e-08 63.2 41 68.3
SGA_v2.0_scaffold73G24522 Striga asiatica HOM05D007219 ORTHO05D008995 1.9e-08 63.2 36 75.0
Lsat_1_v5_gn_5_121560 Lactuca sativa HOM05D007219 ORTHO05D008995 2.5e-08 62.8 41 61.0
SalBow7G0564 Salvia bowleyana HOM05D007219 ORTHO05D008995 2.5e-08 62.8 36 77.8
CsaV3_7G002720 Cucumis sativus L. HOM05D007219 ORTHO05D008995 3.2e-08 62.4 35 80.0
Duzib138G0301 Durio zibethinus HOM05D007219 ORTHO05D008995 3.2e-08 62.4 41 63.4
Ciclev10016673m.g Citrus clementina HOM05D007219 ORTHO05D008995 5.5e-08 61.6 41 63.4
COL.COLO4_04268 Corchorus olitorius HOM05D007219 ORTHO05D008995 5.5e-08 61.6 41 63.4
MELO3C024213.2 Cucumis melo HOM05D007219 ORTHO05D008995 5.5e-08 61.6 34 82.4
Glyma.13G025700 Glycine max HOM05D007219 ORTHO05D008995 5.5e-08 61.6 36 72.2
Sabra14G0123400 Salix brachista HOM05D007219 ORTHO05D008995 5.5e-08 61.6 41 63.4
Sc21g0000880 Simmondsia chinensis HOM05D007219 ORTHO05D008995 5.5e-08 61.6 42 61.9
Aqoxy1G04023 Aquilegia oxysepala HOM05D007219 ORTHO05D008995 7.2e-08 61.2 37 67.6
HanXRQChr12g0373931 Helianthus annuus HOM05D007219 ORTHO05D008995 9.4e-08 60.8 41 65.9
GSVIVG01030037001 Vitis vinifera HOM05D007219 ORTHO05D008995 1.2e-07 60.5 41 63.4
Sed0018447 Sechium edule HOM05D007219 ORTHO05D008995 1.6e-07 60.1 33 81.8
MSTRG.14930 Avicennia marina HOM05D007219 ORTHO05D008995 2.1e-07 59.7 36 72.2
Lj6g0005071 Lotus japonicus HOM05D007219 ORTHO05D008995 2.1e-07 59.7 41 58.5
Aa31LG1G4150 Aethionema arabicum HOM05D002708 ORTHO05D003516 2.7e-07 59.3 37 64.9
CSS0007522 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 2.7e-07 59.3 30 86.7
TWI36G0002 Tripterygium wilfordii HOM05D007219 ORTHO05D008995 2.7e-07 59.3 41 65.9
AL3G42440 Arabidopsis lyrata HOM05D007219 ORTHO05D008995 3.6e-07 58.9 37 62.2
Oeu029809.1 Olea europaea HOM05D007219 ORTHO05D008995 3.6e-07 58.9 41 63.4
THA.LOC104826618 Tarenaya hassleriana HOM05D007219 ORTHO05D008995 4.7e-07 58.5 37 67.6
arahy.Tifrunner.gnm1.ann1.E78GDQ Arachis hypogaea HOM05D007219 ORTHO05D008995 6.1e-07 58.2 41 58.5
arahy.Tifrunner.gnm1.ann1.XZ9N91 Arachis hypogaea HOM05D007219 ORTHO05D008995 6.1e-07 58.2 41 58.5
Carub.0003s2645 Capsella rubella HOM05D007219 ORTHO05D008995 6.1e-07 58.2 37 62.2
CARHR102840 Cardamine hirsuta HOM05D007219 ORTHO05D008995 6.1e-07 58.2 37 62.2
Duzib133G0547 Durio zibethinus HOM05D007219 ORTHO05D008995 6.1e-07 58.2 48 52.1
AT2G04845 Arabidopsis thaliana HOM05D007219 ORTHO05D008995 8.0e-07 57.8 37 64.9
CDE10G1006 Ceratophyllum demersum HOM05D007219 ORTHO05D008995 8.0e-07 57.8 41 56.1
PGR142G0267 Punica granatum HOM05D007219 ORTHO05D008995 8.0e-07 57.8 41 61.0
Sp3g23430 Schrenkiella parvula HOM05D007219 ORTHO05D008995 1.0e-06 57.4 37 59.5
Atru.chr6.3346 Acer truncatum HOM05D007219 ORTHO05D008995 1.4e-06 57.0 41 58.5
CSS0005185 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-06 57.0 34 76.5
CSS0040160 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-06 57.0 34 76.5
CSS0042015 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 1.4e-06 57.0 34 76.5
Gohir.A07G167500 Gossypium hirsutum HOM05D007219 ORTHO05D008995 1.4e-06 57.0 41 58.5
Thecc.01G189100 Theobroma cacao HOM05D007219 ORTHO05D008995 1.4e-06 57.0 41 58.5
BolC3t17801H Brassica oleracea HOM05D007219 ORTHO05D008995 1.8e-06 56.6 37 59.5
DCAR_019229 Daucus carota HOM05D007219 ORTHO05D008995 1.8e-06 56.6 41 53.7
Thhalv10002661m.g Eutrema salsugineum HOM05D007219 ORTHO05D008995 1.8e-06 56.6 37 59.5
arahy.Tifrunner.gnm1.ann1.N6EW4G Arachis hypogaea HOM05D007219 ORTHO05D008995 2.3e-06 56.2 41 56.1
TPR.G19322 Trifolium pratense HOM05D007219 ORTHO05D008995 2.3e-06 56.2 41 56.1
Medtr3g083200 Medicago truncatula HOM05D007219 ORTHO05D008995 3.0e-06 55.8 41 56.1
Eucgr.K00659 Eucalyptus grandis HOM05D007219 ORTHO05D008995 4.0e-06 55.5 41 56.1
CSS0013618 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 5.2e-06 55.1 34 70.6
CSS0001231 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0003542 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0008214 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0016088 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0027060 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0037011 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0045334 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
CSS0046119 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 6.7e-06 54.7 30 83.3
Haze_12702 Corylus avellana HOM05D007219 ORTHO05D008995 6.7e-06 54.7 61 44.3
Psat5g102680 Pisum sativum HOM05D007219 ORTHO05D008995 6.7e-06 54.7 37 59.5
CSS0028601 Camellia sinensis var. sinensis HOM05D005012 ORTHO05D005886 8.8e-06 54.3 30 83.3
SEGI_01956 Sequoiadendron giganteum HOM05D007219 ORTHO05D008995 8.8e-06 54.3 37 64.9


User provided reference genes

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