Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030467 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.1e-292 1010.0 832 100.0
CSS0033722 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.7e-77 295.0 192 81.2
CSS0025914 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.4e-74 284.6 188 80.9
CSS0046362 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.8e-67 261.2 180 77.2
CSS0002096 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.7e-64 251.9 196 71.4
CSS0011965 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.8e-64 250.8 148 87.2
CSS0018849 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.8e-64 250.8 194 73.2
CSS0032373 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 3.8e-64 250.8 148 87.2
Dinv08184 Davidia involucrata HOM05D006008 ORTHO05D007334 1.2e-62 245.7 190 67.4
Actinidia23109 Actinidia chinensis HOM05D006008 ORTHO05D007334 5.1e-61 240.4 194 66.5
Lj7P735T18 Lonicera japonica HOM05D006008 ORTHO05D007334 9.0e-58 229.6 187 65.8
DCAR_022863 Daucus carota HOM05D006008 ORTHO05D007334 2.6e-57 228.0 195 63.6
Manes.08G047700 Manihot esculenta HOM05D006008 ORTHO05D007334 1.7e-56 225.3 192 62.0
Sc09g0010690 Simmondsia chinensis HOM05D006008 ORTHO05D007334 8.4e-56 223.0 188 63.3
Atru.chr7.2558 Acer truncatum HOM05D006008 ORTHO05D007334 1.4e-55 222.2 194 61.9
Potri.006G264800 Populus trichocarpa HOM05D006008 ORTHO05D007334 1.9e-55 221.9 190 61.1
vmacro05220 Vaccinium macrocarpon HOM05D006008 ORTHO05D007334 4.2e-55 220.7 194 61.3
Sabra06G0206900 Salix brachista HOM05D006008 ORTHO05D007334 1.2e-54 219.2 190 61.6
CSS0013958 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 2.1e-54 218.4 139 82.7
Rhsim07G0155900 Rhododendron simsii HOM05D006008 ORTHO05D007334 4.6e-54 217.2 193 60.1
Cpa.g.sc148.18 Carica papaya HOM05D006008 ORTHO05D007334 1.0e-53 216.1 196 61.2
PGSC0003DMG400027232 Solanum tuberosum HOM05D006008 ORTHO05D007334 1.0e-53 216.1 187 61.0
Migut.A00359 Erythranthe guttata HOM05D006008 ORTHO05D007334 2.3e-53 214.9 193 61.1
Duzib187G0883 Durio zibethinus HOM05D006008 ORTHO05D007334 8.7e-53 213.0 185 61.6
FAN27G1628 Fragaria x ananassa HOM05D006008 ORTHO05D007334 8.7e-53 213.0 195 58.5
FAN20G2406 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.1e-52 212.6 195 59.0
RcHm_v2.0_Chr6g0299351 Rosa chinensis HOM05D006008 ORTHO05D007334 1.1e-52 212.6 199 58.3
TAR362G1189 Trochodendron aralioides HOM05D006008 ORTHO05D007334 1.9e-52 211.8 182 64.3
Cfa013044 Carpinus fangiana HOM05D006008 ORTHO05D007334 2.5e-52 211.5 186 61.8
Haze_21405 Corylus avellana HOM05D006008 ORTHO05D007334 7.4e-52 209.9 188 60.6
Lsat_1_v5_gn_2_36140 Lactuca sativa HOM05D006008 ORTHO05D007334 7.4e-52 209.9 194 60.8
Solyc04g015440.4 Solanum lycopersicum HOM05D006008 ORTHO05D007334 7.4e-52 209.9 178 61.8
Sopen04g007490 Solanum pennellii HOM05D006008 ORTHO05D007334 7.4e-52 209.9 178 61.8
FAN15G1576 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.3e-51 209.1 195 56.4
Peaxi162Scf01286g00125 Petunia axillaris HOM05D006008 ORTHO05D007334 3.7e-51 207.6 153 68.0
Hund20025 Selenicereus undatus HOM05D006008 ORTHO05D007334 3.7e-51 207.6 191 58.1
CANSAT54G1994 Cannabis sativa HOM05D006008 ORTHO05D007334 4.8e-51 207.2 193 57.5
QL02p018792 Quercus lobata HOM05D006008 ORTHO05D007334 4.8e-51 207.2 178 62.9
FvH4_2g41180 Fragaria vesca HOM05D006008 ORTHO05D007334 6.3e-51 206.8 191 57.6
Thecc.09G015100 Theobroma cacao HOM05D006008 ORTHO05D007334 6.3e-51 206.8 184 60.3
Nitab4.5_0000147g0080 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.5e-49 202.2 190 59.5
CAN.G676.42 Capsicum annuum HOM05D006008 ORTHO05D007334 2.0e-49 201.8 178 60.7
TWI63G1661 Tripterygium wilfordii HOM05D006008 ORTHO05D007334 4.5e-49 200.7 191 57.1
CANSAT21G0760 Cannabis sativa HOM05D006008 ORTHO05D007334 7.7e-49 199.9 192 56.2
AUR62041936 Chenopodium quinoa HOM05D006008 ORTHO05D007334 7.7e-49 199.9 183 60.1
CSS0039067 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 1.3e-48 199.1 302 45.0
Phvul.009G086500 Phaseolus vulgaris HOM05D006008 ORTHO05D007334 3.8e-48 197.6 191 56.0
CANSAT21G2303 Cannabis sativa HOM05D006008 ORTHO05D007334 5.0e-48 197.2 194 57.2
Gorai.009G063400 Gossypium raimondii HOM05D006008 ORTHO05D007334 6.5e-48 196.8 181 58.0
Gohir.D05G062300 Gossypium hirsutum HOM05D006008 ORTHO05D007334 1.4e-47 195.7 181 57.5
PGR142G1849 Punica granatum HOM05D006008 ORTHO05D007334 1.4e-47 195.7 171 62.0
CANSAT56G1562 Cannabis sativa HOM05D006008 ORTHO05D007334 1.9e-47 195.3 195 56.4
arahy.Tifrunner.gnm1.ann1.HZWF25 Arachis hypogaea HOM05D006008 ORTHO05D007334 2.5e-47 194.9 183 56.8
Aqoxy7G02519 Aquilegia oxysepala HOM05D006008 ORTHO05D007334 1.6e-46 192.2 146 67.1
SalBow4G1429 Salvia bowleyana HOM05D006008 ORTHO05D007334 2.1e-46 191.8 185 56.8
VMungo1309G2388 Vigna mungo HOM05D006008 ORTHO05D007334 2.1e-46 191.8 176 57.4
CANSAT80G2648 Cannabis sativa HOM05D006008 ORTHO05D007334 3.6e-46 191.0 195 54.9
ClCG05G016190 Citrullus lanatus HOM05D006008 ORTHO05D007334 3.6e-46 191.0 182 54.9
Gohir.A05G060100 Gossypium hirsutum HOM05D006008 ORTHO05D007334 3.6e-46 191.0 179 56.4
PSO384G1678 Papaver somniferum HOM05D006008 ORTHO05D007334 7.9e-46 189.9 186 57.0
arahy.Tifrunner.gnm1.ann1.E59C1E Arachis hypogaea HOM05D006008 ORTHO05D007334 1.8e-45 188.7 152 62.5
ECA234G3283 Erigeron canadensis HOM05D006008 ORTHO05D007334 2.3e-45 188.3 182 56.6
SGA_v2.0_scaffold147G36344 Striga asiatica HOM05D006008 ORTHO05D007334 2.3e-45 188.3 180 56.1
CANSAT54G0183 Cannabis sativa HOM05D006008 ORTHO05D007334 8.8e-45 186.4 193 54.9
Glyma.06G061000 Glycine max HOM05D006008 ORTHO05D007334 1.1e-44 186.0 185 55.1
Lj1g0008194 Lotus japonicus HOM05D006008 ORTHO05D007334 2.0e-44 185.3 195 54.9
MELO3C032315.2 Cucumis melo HOM05D006008 ORTHO05D007334 3.3e-44 184.5 184 54.3
Nitab4.5_0001663g0180 Nicotiana tabacum HOM05D006008 ORTHO05D007334 1.3e-43 182.6 129 71.3
Sed0007713 Sechium edule HOM05D006008 ORTHO05D007334 3.7e-43 181.0 187 52.9
CiPaw.08G005700 Carya illinoinensis HOM05D006008 ORTHO05D007334 4.8e-43 180.6 120 75.0
Ah.04g163370 Amaranthus hybridus HOM05D002153 ORTHO05D002137 8.2e-43 179.9 185 54.1
Oeu001622.3 Olea europaea HOM05D006008 ORTHO05D007334 1.1e-42 179.5 129 72.1
CANSAT80G0905 Cannabis sativa HOM05D006008 ORTHO05D007334 1.4e-42 179.1 328 50.0
Lalb_Chr23g0268201 Lupinus albus HOM05D006008 ORTHO05D007334 1.8e-42 178.7 174 55.7
THA.LOC104803618 Tarenaya hassleriana HOM05D006008 ORTHO05D007334 3.1e-42 177.9 137 65.7
ATR0580G290 Amborella trichopoda HOM05D006008 ORTHO05D007334 9.1e-42 176.4 153 58.8
Ca_15782_v3 Cicer arietinum L. HOM05D006008 ORTHO05D007334 2.0e-41 175.3 180 53.3
Medtr3g105900 Medicago truncatula HOM05D006008 ORTHO05D007334 3.4e-41 174.5 156 58.3
arahy.Tifrunner.gnm1.ann1.6M8E1A Arachis hypogaea HOM05D006008 ORTHO05D007334 5.9e-41 173.7 166 56.0
MD08G1055800 Malus domestica HOM05D006008 ORTHO05D007334 7.7e-41 173.3 166 61.4
BraA03t15143Z Brassica rapa HOM05D006008 ORTHO05D007334 2.2e-40 171.8 136 62.5
arahy.Tifrunner.gnm1.ann1.83E5X5 Arachis hypogaea HOM05D006008 ORTHO05D007334 5.0e-40 170.6 164 56.1
Psat5g033520 Pisum sativum HOM05D006008 ORTHO05D007334 4.2e-39 167.5 137 62.0
TPR.G1871 Trifolium pratense HOM05D006008 ORTHO05D007334 5.5e-39 167.2 137 62.0
Ciclev10007356m.g Citrus clementina HOM05D006008 ORTHO05D007334 2.7e-38 164.9 116 71.6
HanXRQChr09g0270581 Helianthus annuus HOM05D006008 ORTHO05D007334 2.3e-37 161.8 113 69.0
Eucgr.C01897 Eucalyptus grandis HOM05D006008 ORTHO05D007334 1.3e-35 156.0 107 70.1
Prupe.1G394600 Prunus persica HOM05D006008 ORTHO05D007334 6.3e-35 153.7 146 57.5
Cc08_g07210 Coffea canephora HOM05D006008 ORTHO05D007334 7.7e-33 146.7 150 54.0
GSVIVG01035975001 Vitis vinifera HOM05D006008 ORTHO05D007334 2.2e-32 145.2 138 55.8
Aa31LG2G18380 Aethionema arabicum HOM05D006008 ORTHO05D007334 3.8e-32 144.4 111 63.1
A03p61020 Brassica napus HOM05D006008 ORTHO05D007334 5.0e-32 144.1 112 60.7
C07p58920 Brassica napus HOM05D006008 ORTHO05D007334 8.5e-32 143.3 109 64.2
BolC7t46339H Brassica oleracea HOM05D006008 ORTHO05D007334 8.5e-32 143.3 109 64.2
Nn7g36097 Nelumbo nucifera HOM05D006008 ORTHO05D007334 1.1e-31 142.9 156 52.6
AL7G20130 Arabidopsis lyrata HOM05D006008 ORTHO05D007334 1.9e-31 142.1 103 67.0
Carub.0007s0870 Capsella rubella HOM05D006008 ORTHO05D007334 1.9e-31 142.1 112 60.7
CDE02G3851 Ceratophyllum demersum HOM05D006008 ORTHO05D007334 7.2e-31 140.2 135 56.3
CARHR239780 Cardamine hirsuta HOM05D006008 ORTHO05D007334 8.0e-30 136.7 100 66.0
BcaNung01494 Brassica carinata HOM05D006008 ORTHO05D007334 1.0e-29 136.3 156 51.9
Thhalv10024264m.g Eutrema salsugineum HOM05D006008 ORTHO05D007334 4.0e-29 134.4 99 64.6
Sp7g29660 Schrenkiella parvula HOM05D006008 ORTHO05D007334 3.3e-28 131.3 98 65.3
EL10Ac4g08536 Beta vulgaris HOM05D006008 ORTHO05D007334 9.7e-28 129.8 146 50.0
AT4G31850 Arabidopsis thaliana HOM05D006008 ORTHO05D007334 1.1e-26 126.3 93 66.7
MBI15_g18236_MAGBIO Magnolia biondii HOM05D006008 ORTHO05D007334 1.1e-26 126.3 88 71.6
A01p06430 Brassica napus HOM05D006008 ORTHO05D007334 4.1e-26 124.4 100 59.0
C01p07070 Brassica napus HOM05D006008 ORTHO05D007334 4.1e-26 124.4 97 63.9
BraA01t00604Z Brassica rapa HOM05D006008 ORTHO05D007334 5.3e-26 124.0 100 58.0
BcaC09g51977 Brassica carinata HOM05D006008 ORTHO05D007334 1.2e-25 122.9 100 60.0
Zm00001eb393290 Zea mays HOM05D006008 ORTHO05D007334 1.9e-23 115.5 101 55.4
Os10g0421800 Oryza sativa ssp. japonica HOM05D006008 ORTHO05D007334 3.6e-22 111.3 129 45.7
COL.COLO4_18956 Corchorus olitorius HOM05D006008 ORTHO05D007334 2.3e-21 108.6 111 54.1
ATR0180G020 Amborella trichopoda HOM05D006008 ORTHO05D007334 3.0e-21 108.2 112 50.0
Nn7g37618 Nelumbo nucifera HOM05D006008 ORTHO05D007334 5.2e-21 107.5 125 51.2
MSTRG.11782 Avicennia marina HOM05D006008 ORTHO05D007334 8.8e-21 106.7 114 51.8
CANSAT21G2219 Cannabis sativa HOM05D006008 ORTHO05D007334 2.2e-19 102.1 109 51.4
SEGI_41266 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 1.8e-18 99.0 139 43.9
BolC1t00699H Brassica oleracea HOM05D006008 ORTHO05D007334 3.5e-17 94.7 96 52.1
AUR62041257 Chenopodium quinoa HOM05D006008 ORTHO05D007334 1.3e-16 92.8 111 48.6
CSS0031354 Camellia sinensis var. sinensis HOM05D006008 ORTHO05D007334 9.5e-15 86.7 304 44.1
SEGI_02316 Sequoiadendron giganteum HOM05D006008 ORTHO05D007334 3.0e-13 81.6 96 44.8
BcaNung03118 Brassica carinata HOM05D006008 ORTHO05D007334 2.4e-10 72.0 61 59.0
CANSAT54G1800 Cannabis sativa HOM05D006008 ORTHO05D007334 4.1e-10 71.2 143 37.8
QL04p089735 Quercus lobata HOM05D022192 ORTHO05D009908 7.0e-10 70.5 46 78.3
FAN20G1003 Fragaria x ananassa HOM05D006008 ORTHO05D007334 1.6e-09 69.3 36 80.6
ATR0180G025 Amborella trichopoda HOM05D042338 ORTHO05D031092 4.5e-09 67.8 73 47.9
Glyma.04G060500 Glycine max HOM05D006008 ORTHO05D007334 1.3e-08 66.2 67 49.3
QL11p052398 Quercus lobata HOM05D006008 ORTHO05D007334 1.1e-07 63.2 35 80.0
CDE05G2293 Ceratophyllum demersum HOM05D000240 ORTHO05D002608 2.1e-06 58.9 31 74.2


User provided reference genes

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