Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030398 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D017728 7.5e-46 186.8 93 100.0
Hma1.2p1_0597F.1_g186530 Hydrangea macrophylla HOM05D000148 ORTHO05D000081 9.6e-09 63.5 48 60.4
Hma1.2p1_2332F.1_g320090 Hydrangea macrophylla HOM05D000148 ORTHO05D000081 1.1e-07 60.1 90 40.0
Rhsim08G0185600 Rhododendron simsii HOM05D000148 ORTHO05D000081 1.1e-07 60.1 58 48.3
Hma1.2p1_0108F.1_g051840 Hydrangea macrophylla HOM05D000148 ORTHO05D000081 1.8e-07 59.3 83 41.0
Rhsim12G0106600 Rhododendron simsii HOM05D000148 ORTHO05D000081 1.8e-07 59.3 84 40.5
TWI60G1266 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 3.1e-07 58.5 45 51.1
Rhsim08G0185900 Rhododendron simsii HOM05D000148 ORTHO05D000081 4.0e-07 58.2 58 46.6
Sabra11G0109300 Salix brachista HOM05D000148 ORTHO05D000081 4.0e-07 58.2 51 52.9
Hma1.2p1_0081F.1_g042260 Hydrangea macrophylla HOM05D000148 ORTHO05D000081 5.3e-07 57.8 48 52.1
Hma1.2p1_1961F.1_g309100 Hydrangea macrophylla HOM05D000148 ORTHO05D017728 5.3e-07 57.8 67 44.8
Lj6P656T51 Lonicera japonica HOM05D000148 ORTHO05D000081 5.3e-07 57.8 41 63.4
Prupe.4G140800 Prunus persica HOM05D000148 ORTHO05D000081 5.3e-07 57.8 39 56.4
QL07p025173 Quercus lobata HOM05D000148 ORTHO05D000081 5.3e-07 57.8 55 52.7
Eucgr.L02347 Eucalyptus grandis HOM05D000148 ORTHO05D000081 6.9e-07 57.4 82 42.7
CSS0027941 Camellia sinensis var. sinensis HOM05D000148 ORTHO05D000081 9.0e-07 57.0 48 50.0
MELO3C017689.2 Cucumis melo HOM05D000148 ORTHO05D000081 9.0e-07 57.0 42 50.0
Lj6P642T51 Lonicera japonica HOM05D000148 ORTHO05D000081 9.0e-07 57.0 50 52.0
COL.COLO4_23597 Corchorus olitorius HOM05D000148 ORTHO05D000081 1.2e-06 56.6 56 41.1
Lj6P655T36 Lonicera japonica HOM05D000148 ORTHO05D000081 1.2e-06 56.6 41 61.0
QL07p025262 Quercus lobata HOM05D000148 ORTHO05D000081 1.2e-06 56.6 55 45.5
QL07p025341 Quercus lobata HOM05D000148 ORTHO05D000081 1.2e-06 56.6 55 45.5
QL10p026346 Quercus lobata HOM05D000148 ORTHO05D000081 1.2e-06 56.6 55 52.7
TWI60G0761 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 1.2e-06 56.6 45 51.1
TWI63G1208 Tripterygium wilfordii HOM05D000148 ORTHO05D000081 1.5e-06 56.2 45 51.1
Hma1.2p1_0522F.1_g171870 Hydrangea macrophylla HOM05D000148 ORTHO05D000081 2.0e-06 55.8 59 44.1
Prupe.4G140700 Prunus persica HOM05D000148 ORTHO05D000081 2.0e-06 55.8 39 56.4
PGR102G3295 Punica granatum HOM05D000148 ORTHO05D000081 2.0e-06 55.8 59 42.4
Cc02_g31430 Coffea canephora HOM05D000148 ORTHO05D000081 2.6e-06 55.5 61 41.0
Cc02_g31470 Coffea canephora HOM05D000148 ORTHO05D000081 2.6e-06 55.5 57 43.9
CsaV3_4G003650 Cucumis sativus L. HOM05D000148 ORTHO05D000081 2.6e-06 55.5 37 62.2
Dinv04841 Davidia involucrata HOM05D000148 ORTHO05D000081 2.6e-06 55.5 85 35.3
Potri.011G124128 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.6e-06 55.5 51 49.0
Potri.011G124156 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.6e-06 55.5 51 49.0
Potri.011G124184 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.6e-06 55.5 51 49.0
Potri.011G124300 Populus trichocarpa HOM05D000148 ORTHO05D000081 2.6e-06 55.5 51 49.0
Cpa.g.sc26.195 Carica papaya HOM05D000148 ORTHO05D000081 3.4e-06 55.1 82 37.8
MBI18_g46418_MAGBIO Magnolia biondii HOM05D000148 ORTHO05D000081 3.4e-06 55.1 49 53.1
MD05G1218500 Malus domestica HOM05D000148 ORTHO05D000081 3.4e-06 55.1 38 60.5
Nitab4.5_0001108g0010 Nicotiana tabacum HOM05D000148 ORTHO05D000081 3.4e-06 55.1 59 39.0
Nitab4.5_0002775g0010 Nicotiana tabacum HOM05D000148 ORTHO05D000081 3.4e-06 55.1 59 39.0
CANSAT56G0125 Cannabis sativa HOM05D000148 ORTHO05D000081 4.4e-06 54.7 65 40.0
CiPaw.10G024200 Carya illinoinensis HOM05D000148 ORTHO05D000081 4.4e-06 54.7 41 58.5
Eucgr.C02410 Eucalyptus grandis HOM05D000148 ORTHO05D000081 4.4e-06 54.7 91 33.0
CsaV3_4G003660 Cucumis sativus L. HOM05D000148 ORTHO05D000081 5.8e-06 54.3 38 50.0
RcHm_v2.0_Chr5g0026751 Rosa chinensis HOM05D000148 ORTHO05D000081 5.8e-06 54.3 53 45.3
MELO3C017690.2 Cucumis melo HOM05D000148 ORTHO05D000081 7.6e-06 53.9 37 59.5
Dinv02926 Davidia involucrata HOM05D000148 ORTHO05D000081 7.6e-06 53.9 85 34.1
Potri.011G124268 Populus trichocarpa HOM05D000148 ORTHO05D000081 7.6e-06 53.9 43 55.8
Potri.011G124500 Populus trichocarpa HOM05D000148 ORTHO05D000081 7.6e-06 53.9 43 55.8
QL07p025149 Quercus lobata HOM05D000148 ORTHO05D000081 7.6e-06 53.9 49 51.0
Sed0021025 Sechium edule HOM05D000148 ORTHO05D034969 7.6e-06 53.9 69 40.6
Atru.chr5.3075 Acer truncatum HOM05D000148 ORTHO05D000081 9.9e-06 53.5 47 48.9
Dinv02927 Davidia involucrata HOM05D000148 ORTHO05D000081 9.9e-06 53.5 85 34.1


User provided reference genes

Program Settings