Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030396 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.4e-112 408.3 202 100.0
CSS0022464 Camellia sinensis var. sinensis HOM05D000041 ORTHO05D008213 3.2e-110 401.7 202 98.5
Dinv15310 Davidia involucrata HOM05D000041 ORTHO05D008213 7.8e-64 247.7 215 61.9
Hma1.2p1_0867F.1_g230270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 6.0e-56 221.5 217 55.3
Actinidia13516 Actinidia chinensis HOM05D000041 ORTHO05D008213 1.6e-53 213.4 216 55.1
Rhsim12G0121300 Rhododendron simsii HOM05D000041 ORTHO05D008213 2.6e-51 206.1 208 53.4
vmacro16260 Vaccinium macrocarpon HOM05D000427 ORTHO05D008213 7.3e-46 188.0 217 48.8
Dinv35049 Davidia involucrata HOM05D000041 ORTHO05D008213 1.6e-45 186.8 187 52.9
Oeu001741.1 Olea europaea HOM05D000041 ORTHO05D008213 6.8e-44 181.4 213 48.4
Lj3C1051T12 Lonicera japonica HOM05D000041 ORTHO05D008213 2.0e-43 179.9 215 46.5
TAR629G3487 Trochodendron aralioides HOM05D000041 ORTHO05D008213 8.4e-42 174.5 215 45.1
CiPaw.05G150100 Carya illinoinensis HOM05D000041 ORTHO05D008213 2.4e-41 172.9 210 43.3
Prupe.1G254900 Prunus persica HOM05D000041 ORTHO05D008213 4.6e-40 168.7 184 49.5
MD13G1090700 Malus domestica HOM05D000041 ORTHO05D008213 7.8e-40 167.9 189 47.6
RcHm_v2.0_Chr4g0443971 Rosa chinensis HOM05D000041 ORTHO05D008213 7.8e-40 167.9 219 45.2
Thecc.02G244000 Theobroma cacao HOM05D000041 ORTHO05D008213 1.3e-39 167.2 216 43.5
MD13G1091000 Malus domestica HOM05D000041 ORTHO05D008213 3.0e-39 166.0 186 48.4
FAN17G1009 Fragaria x ananassa HOM05D000041 ORTHO05D008213 8.7e-39 164.5 219 42.9
Aqoxy3G00996 Aquilegia oxysepala HOM05D000041 ORTHO05D008213 1.9e-38 163.3 215 42.3
Hma1.2p1_0967F.1_g242270 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 3.3e-38 162.5 216 44.4
Nitab4.5_0000113g0200 Nicotiana tabacum HOM05D000041 ORTHO05D008213 4.3e-38 162.2 186 46.2
FAN12G3476 Fragaria x ananassa HOM05D000041 ORTHO05D008213 7.3e-38 161.4 198 45.5
Hma1.2p1_0802F.1_g220530 Hydrangea macrophylla HOM05D000041 ORTHO05D008213 7.3e-38 161.4 216 44.0
Duzib251G0332 Durio zibethinus HOM05D000041 ORTHO05D008213 9.6e-38 161.0 218 40.4
FAN22G0375 Fragaria x ananassa HOM05D000041 ORTHO05D008213 2.8e-37 159.5 219 42.9
FvH4_4g34600 Fragaria vesca HOM05D000041 ORTHO05D008213 3.6e-37 159.1 209 43.1
Thecc.04G007600 Theobroma cacao HOM05D000041 ORTHO05D008213 6.2e-37 158.3 215 42.8
Eucgr.H02614 Eucalyptus grandis HOM05D000041 ORTHO05D008213 8.1e-37 157.9 199 46.2
MBI15_g31114_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D008213 1.1e-36 157.5 186 44.1
PGR119G0660 Punica granatum HOM05D000041 ORTHO05D008213 1.1e-36 157.5 235 38.7
Sopen05g001660 Solanum pennellii HOM05D000041 ORTHO05D008213 1.1e-36 157.5 207 40.1
PGSC0003DMG400004108 Solanum tuberosum HOM05D000041 ORTHO05D008213 1.4e-36 157.1 186 41.4
Peaxi162Scf00338g00013 Petunia axillaris HOM05D000041 ORTHO05D008213 1.8e-36 156.8 215 40.0
Solyc05g005660.1 Solanum lycopersicum HOM05D000041 ORTHO05D008213 1.8e-36 156.8 207 40.1
PGSC0003DMG400030988 Solanum tuberosum HOM05D000041 ORTHO05D008213 1.8e-36 156.8 187 41.7
Manes.12G029800 Manihot esculenta HOM05D000041 ORTHO05D008213 3.1e-36 156.0 216 42.6
FAN07G0244 Fragaria x ananassa HOM05D000041 ORTHO05D008213 4.0e-36 155.6 184 45.7
Gohir.A03G140400 Gossypium hirsutum HOM05D000041 ORTHO05D008213 5.3e-36 155.2 211 40.8
QL03p061546 Quercus lobata HOM05D000041 ORTHO05D008213 9.0e-36 154.5 186 45.2
Nitab4.5_0002579g0050 Nicotiana tabacum HOM05D000041 ORTHO05D008213 1.5e-35 153.7 215 40.0
Haze_12168 Corylus avellana HOM05D000041 ORTHO05D008213 2.0e-35 153.3 234 40.2
Cc11_g14580 Coffea canephora HOM05D000041 ORTHO05D008213 3.4e-35 152.5 222 41.0
Actinidia15039 Actinidia chinensis HOM05D000041 ORTHO05D008213 7.6e-35 151.4 216 45.4
CANSAT01G1335 Cannabis sativa HOM05D000427 ORTHO05D008213 1.7e-34 150.2 214 39.7
GSVIVG01032499001 Vitis vinifera HOM05D000041 ORTHO05D008213 2.2e-34 149.8 223 39.0
DCAR_024142 Daucus carota HOM05D000054 ORTHO05D008213 4.9e-34 148.7 218 39.0
PSO017G2181 Papaver somniferum HOM05D000041 ORTHO05D008213 1.4e-33 147.1 220 37.7
QL02p076968 Quercus lobata HOM05D000427 ORTHO05D008213 1.4e-33 147.1 218 39.0
Nitab4.5_0003454g0020 Nicotiana tabacum HOM05D000041 ORTHO05D008213 1.9e-33 146.7 217 41.0
Actinidia16928 Actinidia chinensis HOM05D000427 ORTHO05D008213 2.4e-33 146.4 205 41.0
Phvul.003G052300 Phaseolus vulgaris HOM05D000041 ORTHO05D008213 7.1e-33 144.8 200 44.0
TWI75G0105 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 2.1e-32 143.3 221 38.9
Glyma.18G137600 Glycine max HOM05D000041 ORTHO05D008213 3.5e-32 142.5 202 42.6
DCAR_011214 Daucus carota HOM05D000041 ORTHO05D008213 4.6e-32 142.1 181 43.6
SalBow2G0112 Salvia bowleyana HOM05D000427 ORTHO05D008213 1.0e-31 141.0 211 39.3
VMungo0251G3655 Vigna mungo HOM05D000041 ORTHO05D008213 1.7e-31 140.2 202 41.6
Glyma.19G010700 Glycine max HOM05D000041 ORTHO05D008213 2.3e-31 139.8 214 36.9
TWI36G0142 Tripterygium wilfordii HOM05D000041 ORTHO05D008213 2.3e-31 139.8 210 38.6
COL.COLO4_04780 Corchorus olitorius HOM05D000041 ORTHO05D008213 3.9e-31 139.0 207 41.1
Prupe.3G282300 Prunus persica HOM05D000041 ORTHO05D008213 6.6e-31 138.3 189 40.7
HanXRQChr08g0208831 Helianthus annuus HOM05D000041 ORTHO05D008213 8.7e-31 137.9 219 35.6
CAN.G680.25 Capsicum annuum HOM05D000041 ORTHO05D008213 7.3e-30 134.8 185 39.5
arahy.Tifrunner.gnm1.ann1.HSMU8H Arachis hypogaea HOM05D000041 ORTHO05D008213 2.8e-29 132.9 199 40.2
arahy.Tifrunner.gnm1.ann1.I2ULHV Arachis hypogaea HOM05D000041 ORTHO05D008213 2.8e-29 132.9 199 40.2
ECA233G2133 Erigeron canadensis HOM05D000041 ORTHO05D008213 3.6e-29 132.5 219 37.4
Cpa.g.sc140.42 Carica papaya HOM05D000041 ORTHO05D008213 4.8e-29 132.1 199 40.2
Ciclev10018188m.g Citrus clementina HOM05D000427 ORTHO05D008213 1.8e-28 130.2 218 36.2
Gohir.A09G025800 Gossypium hirsutum HOM05D000427 ORTHO05D008213 1.8e-28 130.2 205 38.5
Gohir.D02G163100 Gossypium hirsutum HOM05D000041 ORTHO05D008213 2.4e-28 129.8 155 41.3
Gorai.005G183100 Gossypium raimondii HOM05D000041 ORTHO05D008213 2.4e-28 129.8 155 41.3
DCAR_015038 Daucus carota HOM05D000041 ORTHO05D008213 3.1e-28 129.4 211 36.5
Peaxi162Scf00129g01041 Petunia axillaris HOM05D000427 ORTHO05D008213 4.0e-28 129.0 213 35.7
Gohir.D09G025100 Gossypium hirsutum HOM05D000427 ORTHO05D008213 1.2e-27 127.5 206 37.4
Gorai.006G029200 Gossypium raimondii HOM05D000427 ORTHO05D008213 2.6e-27 126.3 205 38.0
FAN25G2233 Fragaria x ananassa HOM05D000041 ORTHO05D008213 4.9e-26 122.1 188 37.8
FAN11G1506 Fragaria x ananassa HOM05D000041 ORTHO05D008213 1.4e-25 120.6 229 34.5
FvH4_3g27000 Fragaria vesca HOM05D000041 ORTHO05D008213 1.9e-25 120.2 229 34.1
Lsat_1_v5_gn_8_159800 Lactuca sativa HOM05D000041 ORTHO05D008213 2.4e-25 119.8 220 35.9
FAN21G3251 Fragaria x ananassa HOM05D000041 ORTHO05D008213 3.2e-25 119.4 229 34.1
Cpa.g.sc69.17 Carica papaya HOM05D000041 ORTHO05D008213 1.2e-24 117.5 142 45.8
FAN16G3398 Fragaria x ananassa HOM05D000106 ORTHO05D008213 1.2e-24 117.5 235 33.2
CAN.G206.38 Capsicum annuum HOM05D000427 ORTHO05D008213 2.7e-24 116.3 181 37.0
PGSC0003DMG400000500 Solanum tuberosum HOM05D000041 ORTHO05D008213 3.5e-24 115.9 180 36.1
Manes.17G122900 Manihot esculenta HOM05D000041 ORTHO05D008213 1.0e-23 114.4 143 43.4
Lsat_1_v5_gn_0_26320 Lactuca sativa HOM05D000041 ORTHO05D008213 1.8e-23 113.6 187 37.4
MD09G1035700 Malus domestica HOM05D000041 ORTHO05D008213 3.9e-23 112.5 145 42.1
Glyma.08G287866 Glycine max HOM05D000041 ORTHO05D008213 8.7e-23 111.3 134 42.5
ATR0691G246 Amborella trichopoda HOM05D000041 ORTHO05D008213 2.5e-22 109.8 212 33.5
Solyc02g086960.2 Solanum lycopersicum HOM05D000517 ORTHO05D008213 3.7e-21 105.9 187 32.6
ECA246G3360 Erigeron canadensis HOM05D000041 ORTHO05D008213 8.1e-21 104.8 218 32.6
CAN.G184.44 Capsicum annuum HOM05D000041 ORTHO05D008213 1.8e-20 103.6 159 35.2
Migut.H00136 Erythranthe guttata HOM05D000041 ORTHO05D008213 2.6e-19 99.8 169 37.3
Migut.L01405 Erythranthe guttata HOM05D000041 ORTHO05D008213 1.0e-18 97.8 186 36.0
TAR622G1092 Trochodendron aralioides HOM05D000041 ORTHO05D008213 2.2e-18 96.7 116 47.4
Cfa009135 Carpinus fangiana HOM05D000041 ORTHO05D008213 6.5e-18 95.1 222 34.2
RcHm_v2.0_Chr2g0170941 Rosa chinensis HOM05D000041 ORTHO05D008213 1.1e-17 94.4 115 40.0
CAN.G184.42 Capsicum annuum HOM05D000041 ORTHO05D008213 6.0e-16 88.6 187 29.4
Duzib268G1618 Durio zibethinus HOM05D000041 ORTHO05D008213 1.1e-14 84.3 159 37.1
SEGI_11793 Sequoiadendron giganteum HOM05D000041 ORTHO05D008213 4.2e-09 65.9 195 24.6
Nitab4.5_0001952g0020 Nicotiana tabacum HOM05D000106 ORTHO05D001065 9.3e-09 64.7 85 36.5
MBI11_g07401_MAGBIO Magnolia biondii HOM05D000166 ORTHO05D009859 7.9e-08 61.6 113 28.3
QL02p093070 Quercus lobata HOM05D000085 ORTHO05D013998 1.5e-06 57.4 114 28.9
MBI15_g07762_MAGBIO Magnolia biondii HOM05D000041 ORTHO05D013998 1.9e-06 57.0 172 25.0


User provided reference genes

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