Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030367 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.6e-74 282.7 145 100.0
CSS0030048 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 8.0e-71 270.4 145 95.9
CSS0012505 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 9.2e-67 256.9 145 91.0
CSS0029694 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.3e-62 242.3 144 87.5
CSS0031485 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 2.3e-62 242.3 144 87.5
Actinidia27444 Actinidia chinensis HOM05D006644 ORTHO05D008285 6.4e-60 234.2 144 84.0
CiPaw.12G106200 Carya illinoinensis HOM05D006644 ORTHO05D008285 7.8e-58 227.3 144 81.2
Hma1.2p1_0123F.1_g057970 Hydrangea macrophylla HOM05D006644 ORTHO05D008285 1.7e-57 226.1 144 80.6
CSS0018627 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 1.9e-56 222.6 145 83.4
QL07p036208 Quercus lobata HOM05D006644 ORTHO05D008285 3.3e-56 221.9 144 79.2
Nitab4.5_0001707g0070 Nicotiana tabacum HOM05D006644 ORTHO05D008285 4.3e-56 221.5 144 79.9
Haze_08586 Corylus avellana HOM05D006644 ORTHO05D008285 5.6e-56 221.1 144 79.2
Nitab4.5_0004059g0010 Nicotiana tabacum HOM05D006644 ORTHO05D008285 5.6e-56 221.1 144 79.9
Solyc08g007440.2 Solanum lycopersicum HOM05D006644 ORTHO05D008285 9.5e-56 220.3 144 79.2
TWI81G0884 Tripterygium wilfordii HOM05D006644 ORTHO05D008285 1.6e-55 219.5 144 77.1
CAN.G1394.30 Capsicum annuum HOM05D006644 ORTHO05D008285 2.1e-55 219.2 143 78.3
Cfa012781 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.1e-55 219.2 144 77.1
PGSC0003DMG400012507 Solanum tuberosum HOM05D006644 ORTHO05D008285 2.8e-55 218.8 144 79.2
Sopen08g003400 Solanum pennellii HOM05D006644 ORTHO05D008285 4.7e-55 218.0 144 78.5
Manes.02G035200 Manihot esculenta HOM05D006644 ORTHO05D008285 8.1e-55 217.2 144 75.7
Gohir.A03G014500 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.4e-54 215.7 144 75.7
Gohir.D03G160300 Gossypium hirsutum HOM05D006644 ORTHO05D008285 2.4e-54 215.7 144 75.7
Potri.001G119700 Populus trichocarpa HOM05D006644 ORTHO05D008285 3.1e-54 215.3 144 75.0
Gorai.003G168800 Gossypium raimondii HOM05D006644 ORTHO05D008285 8.9e-54 213.8 144 75.7
MD04G1082000 Malus domestica HOM05D006644 ORTHO05D008285 1.2e-53 213.4 144 75.0
Actinidia05183 Actinidia chinensis HOM05D006644 ORTHO05D008285 1.5e-53 213.0 144 77.1
CANSAT21G2263 Cannabis sativa HOM05D006644 ORTHO05D008285 1.5e-53 213.0 144 75.0
Lj3P740T25 Lonicera japonica HOM05D006644 ORTHO05D008285 1.5e-53 213.0 144 76.4
Sabra01G0092400 Salix brachista HOM05D006644 ORTHO05D008285 1.5e-53 213.0 144 75.0
MSTRG.22191 Avicennia marina HOM05D006644 ORTHO05D008285 2.0e-53 212.6 144 75.0
Cpa.g.sc29.104 Carica papaya HOM05D006644 ORTHO05D008285 2.0e-53 212.6 144 75.0
COL.COLO4_37229 Corchorus olitorius HOM05D000927 ORTHO05D000850 2.6e-53 212.2 144 75.0
Cc08_g13030 Coffea canephora HOM05D006644 ORTHO05D008285 3.4e-53 211.8 144 75.7
Eucgr.E00462 Eucalyptus grandis HOM05D006644 ORTHO05D008285 4.4e-53 211.5 143 76.9
Ciclev10024149m.g Citrus clementina HOM05D006644 ORTHO05D008285 7.6e-53 210.7 144 75.7
Prupe.5G076400 Prunus persica HOM05D006644 ORTHO05D008285 9.9e-53 210.3 144 74.3
Atru.chr12.1357 Acer truncatum HOM05D006644 ORTHO05D008285 1.7e-52 209.5 144 74.3
Duzib068G0588 Durio zibethinus HOM05D006644 ORTHO05D008285 2.2e-52 209.1 144 73.6
TAR629G2969 Trochodendron aralioides HOM05D006644 ORTHO05D008285 2.2e-52 209.1 144 76.4
ClCG10G003030 Citrullus lanatus HOM05D006644 ORTHO05D008285 2.9e-52 208.8 144 72.9
RcHm_v2.0_Chr7g0202141 Rosa chinensis HOM05D006644 ORTHO05D008285 3.8e-52 208.4 144 72.9
Thecc.03G258000 Theobroma cacao HOM05D006644 ORTHO05D008285 4.9e-52 208.0 144 72.2
MELO3C013973.2 Cucumis melo HOM05D006644 ORTHO05D008285 1.4e-51 206.5 144 72.9
Oeu046413.1 Olea europaea HOM05D006644 ORTHO05D008285 1.4e-51 206.5 144 73.6
Oeu046415.1 Olea europaea HOM05D006644 ORTHO05D008285 1.4e-51 206.5 144 73.6
Dinv39097 Davidia involucrata HOM05D006644 ORTHO05D008285 1.9e-51 206.1 131 81.7
FAN08G3361 Fragaria x ananassa HOM05D006644 ORTHO05D008285 2.4e-51 205.7 144 72.9
Sed0006360 Sechium edule HOM05D006644 ORTHO05D008285 2.4e-51 205.7 144 73.6
Aqoxy2G01551 Aquilegia oxysepala HOM05D006644 ORTHO05D008285 3.2e-51 205.3 144 74.3
CsaV3_3G003070 Cucumis sativus L. HOM05D006644 ORTHO05D008285 3.2e-51 205.3 144 72.2
FvH4_5g00371 Fragaria vesca HOM05D006644 ORTHO05D008285 4.1e-51 204.9 144 72.9
Lj2g0023084 Lotus japonicus HOM05D006644 ORTHO05D008285 9.2e-51 203.8 144 71.5
DCAR_021556 Daucus carota HOM05D006644 ORTHO05D008285 1.2e-50 203.4 144 72.9
FAN04G2033 Fragaria x ananassa HOM05D006644 ORTHO05D008285 1.6e-50 203.0 144 72.2
Glyma.13G075600 Glycine max HOM05D006644 ORTHO05D008285 2.1e-50 202.6 144 70.8
arahy.Tifrunner.gnm1.ann1.FSA67V Arachis hypogaea HOM05D006644 ORTHO05D008285 4.6e-50 201.4 144 71.5
arahy.Tifrunner.gnm1.ann1.TVS5XD Arachis hypogaea HOM05D006644 ORTHO05D008285 4.6e-50 201.4 144 71.5
Peaxi162Scf00102g01130 Petunia axillaris HOM05D006644 ORTHO05D008285 6.0e-50 201.1 128 79.7
Phvul.011G156400 Phaseolus vulgaris HOM05D006644 ORTHO05D008285 6.0e-50 201.1 144 70.1
Medtr5g012060 Medicago truncatula HOM05D006644 ORTHO05D008285 7.8e-50 200.7 144 70.1
TPR.G25884 Trifolium pratense HOM05D006644 ORTHO05D008285 1.0e-49 200.3 144 70.8
unitig_0.g533 Utricularia gibba HOM05D006644 ORTHO05D008285 1.0e-49 200.3 144 68.8
VMungo0720G3176 Vigna mungo HOM05D006644 ORTHO05D008285 1.0e-49 200.3 144 70.1
Ca_06699_v3 Cicer arietinum L. HOM05D006644 ORTHO05D008285 1.3e-49 199.9 144 69.4
Sc01g0009310 Simmondsia chinensis HOM05D006644 ORTHO05D008285 6.6e-49 197.6 144 71.5
Nn4g25799 Nelumbo nucifera HOM05D006644 ORTHO05D008285 1.1e-48 196.8 144 72.9
Lalb_Chr05g0214591 Lupinus albus HOM05D006644 ORTHO05D008285 1.9e-48 196.1 144 70.1
Hund11575 Selenicereus undatus HOM05D006644 ORTHO05D008285 2.5e-48 195.7 144 70.8
HanXRQChr16g0502401 Helianthus annuus HOM05D006644 ORTHO05D008285 3.3e-48 195.3 142 71.1
Psat2g178760 Pisum sativum HOM05D006644 ORTHO05D008285 3.3e-48 195.3 144 69.4
ECA232G2550 Erigeron canadensis HOM05D006644 ORTHO05D008285 4.3e-48 194.9 144 70.1
AUR62010133 Chenopodium quinoa HOM05D006644 ORTHO05D008285 2.1e-47 192.6 143 68.5
SalBow7G1671 Salvia bowleyana HOM05D006644 ORTHO05D008285 2.1e-47 192.6 141 69.5
Carub.0002s0225 Capsella rubella HOM05D006644 ORTHO05D008285 2.8e-47 192.2 145 69.0
Thhalv10023606m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 2.8e-47 192.2 145 70.3
Aa31LG2G270 Aethionema arabicum HOM05D006644 ORTHO05D008285 3.6e-47 191.8 146 67.1
Migut.E00967 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.1e-46 190.3 144 70.1
CARHR049110 Cardamine hirsuta HOM05D006644 ORTHO05D008285 3.1e-46 188.7 145 69.0
Lsat_1_v5_gn_4_110420 Lactuca sativa HOM05D006644 ORTHO05D008285 3.1e-46 188.7 144 67.4
THA.LOC104818444 Tarenaya hassleriana HOM05D006644 ORTHO05D008285 3.1e-46 188.7 146 67.1
AL2G13060 Arabidopsis lyrata HOM05D006644 ORTHO05D008285 5.2e-46 188.0 145 69.0
BcaC04g22441 Brassica carinata HOM05D006644 ORTHO05D008285 5.2e-46 188.0 145 67.6
BolC9t54841H Brassica oleracea HOM05D006644 ORTHO05D008285 5.2e-46 188.0 145 67.6
Lalb_Chr16g0379761 Lupinus albus HOM05D006644 ORTHO05D008285 5.2e-46 188.0 143 66.4
MBI05_g39054_MAGBIO Magnolia biondii HOM05D006644 ORTHO05D008285 5.2e-46 188.0 144 69.4
Sp2g01910 Schrenkiella parvula HOM05D006644 ORTHO05D008285 5.2e-46 188.0 145 68.3
C09p19300 Brassica napus HOM05D006644 ORTHO05D008285 6.9e-46 187.6 145 67.6
BcaB07g31354 Brassica carinata HOM05D006644 ORTHO05D008285 1.2e-45 186.8 145 66.2
Migut.E01682 Erythranthe guttata HOM05D006644 ORTHO05D008285 1.2e-45 186.8 144 69.4
Ah.12g056410 Amaranthus hybridus HOM05D000927 ORTHO05D000850 2.0e-45 186.0 143 67.8
AT1G62730 Arabidopsis thaliana HOM05D006644 ORTHO05D008285 2.6e-45 185.7 145 68.3
A09p16050 Brassica napus HOM05D006644 ORTHO05D008285 9.9e-45 183.7 145 65.5
BraA09t37241Z Brassica rapa HOM05D006644 ORTHO05D008285 9.9e-45 183.7 145 65.5
HPP92_012043 Vanilla planifolia HOM05D006644 ORTHO05D008285 6.4e-44 181.0 144 63.9
SGA_v2.0_scaffold13G06437 Striga asiatica HOM05D006644 ORTHO05D008285 1.6e-42 176.4 159 61.6
CDE05G2087 Ceratophyllum demersum HOM05D006644 ORTHO05D008285 2.3e-41 172.6 144 64.6
Os06g0104100 Oryza sativa ssp. japonica HOM05D006644 ORTHO05D008285 9.6e-40 167.2 144 62.5
GSVIVG01000849001 Vitis vinifera HOM05D006644 ORTHO05D008285 1.4e-38 163.3 144 61.8
Zm00001eb268550 Zea mays HOM05D006644 ORTHO05D008285 1.7e-36 156.4 145 60.7
Zm00001eb201480 Zea mays HOM05D006644 ORTHO05D008285 3.2e-35 152.1 146 58.9
Zm00001eb268530 Zea mays HOM05D006644 ORTHO05D008285 5.4e-35 151.4 145 57.9
ATR0789G127 Amborella trichopoda HOM05D006644 ORTHO05D008285 1.9e-32 142.9 144 57.6
CSS0049876 Camellia sinensis var. sinensis HOM05D006644 ORTHO05D008285 4.8e-31 138.3 81 88.9
SEGI_02663 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.1e-30 135.6 145 53.8
SEGI_03161 Sequoiadendron giganteum HOM05D006644 ORTHO05D008285 3.1e-30 135.6 145 53.8
ATR0789G122 Amborella trichopoda HOM05D006644 ORTHO05D008285 5.3e-30 134.8 139 55.4
Pp3c14_3830 Physcomitrium patens HOM05D006644 ORTHO05D008285 2.2e-28 129.4 135 52.6
Mapoly0004s0255 Marchantia polymorpha HOM05D006644 ORTHO05D008285 4.6e-26 121.7 134 53.0
BcaC06g31907 Brassica carinata HOM05D006644 ORTHO05D008285 5.6e-24 114.8 136 53.7
CBR_g24133 Chara braunii HOM05D006644 ORTHO05D008285 3.1e-22 109.0 133 46.6
SMO358G0371 Selaginella moellendorffii HOM05D006644 ORTHO05D008285 3.1e-22 109.0 139 43.9
Thhalv10029515m.g Eutrema salsugineum HOM05D006644 ORTHO05D008285 1.5e-21 106.7 137 49.6
Zm00001eb270010 Zea mays HOM05D006644 ORTHO05D008285 5.8e-21 104.8 85 63.5
QL12p014121 Quercus lobata HOM05D006644 ORTHO05D008285 7.1e-19 97.8 138 44.9
PRCOL_00006235 Prasinoderma coloniale HOM05D006644 ORTHO05D008285 4.6e-18 95.1 134 42.5
MCO14G155 Micromonas commoda HOM05D006644 ORTHO05D008285 4.1e-14 82.0 143 37.8
Cre03.g194300 Chlamydomonas reinhardtii HOM05D006644 ORTHO05D008285 7.7e-13 77.8 131 39.7
Cfa023787 Carpinus fangiana HOM05D006644 ORTHO05D008285 2.8e-07 59.3 133 33.1
AagrBONN_evm.TU.Sc2ySwM_362.950 Anthoceros agrestis HOM05D006644 ORTHO05D008285 5.3e-06 55.1 41 56.1


User provided reference genes

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