Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030357 Camellia sinensis var. sinensis HOM05D006439 ORTHO05D008152 3.2e-113 411.8 205 100.0
Actinidia31281 Actinidia chinensis HOM05D006439 ORTHO05D008152 1.1e-54 217.2 150 75.3
vmacro08831 Vaccinium macrocarpon HOM05D006439 ORTHO05D008152 4.3e-54 215.3 171 64.3
Lj3A1001T29 Lonicera japonica HOM05D006439 ORTHO05D008152 6.5e-42 174.9 175 54.9
Atru.chr8.1600 Acer truncatum HOM05D006439 ORTHO05D008152 7.9e-40 167.9 172 57.0
QL07p039851 Quercus lobata HOM05D006439 ORTHO05D008152 7.9e-40 167.9 172 55.8
GSVIVG01033817001 Vitis vinifera HOM05D006439 ORTHO05D008152 1.0e-39 167.5 171 55.6
Hma1.2p1_0232F.1_g097640 Hydrangea macrophylla HOM05D006439 ORTHO05D008152 2.3e-39 166.4 175 57.1
QL11p044009 Quercus lobata HOM05D006439 ORTHO05D009270 2.8e-37 159.5 176 54.5
CiPaw.09G010200 Carya illinoinensis HOM05D006439 ORTHO05D008152 1.4e-36 157.1 172 54.7
Nitab4.5_0000381g0240 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.2e-35 154.1 171 53.2
Cfa016567 Carpinus fangiana HOM05D006439 ORTHO05D008152 5.9e-35 151.8 173 53.2
DCAR_009146 Daucus carota HOM05D006439 ORTHO05D008152 7.7e-35 151.4 175 50.9
Nitab4.5_0005447g0020 Nicotiana tabacum HOM05D006439 ORTHO05D008152 1.3e-34 150.6 171 51.5
Thecc.05G084500 Theobroma cacao HOM05D006439 ORTHO05D008152 5.0e-34 148.7 171 53.2
Migut.L01768 Erythranthe guttata HOM05D006439 ORTHO05D008152 6.5e-34 148.3 165 50.3
Peaxi162Scf00146g00718 Petunia axillaris HOM05D006439 ORTHO05D008152 1.5e-33 147.1 171 50.9
Prupe.7G115000 Prunus persica HOM05D006439 ORTHO05D008152 1.5e-33 147.1 175 52.6
Ciclev10011131m.g Citrus clementina HOM05D006439 ORTHO05D008152 4.2e-33 145.6 175 51.4
Haze_19565 Corylus avellana HOM05D006439 ORTHO05D008152 4.2e-33 145.6 173 50.9
Duzib093G0471 Durio zibethinus HOM05D006439 ORTHO05D008152 5.5e-33 145.2 176 51.1
Solyc10g085600.2 Solanum lycopersicum HOM05D006439 ORTHO05D008152 1.2e-32 144.1 175 49.1
CAN.G1099.9 Capsicum annuum HOM05D006439 ORTHO05D008152 2.1e-32 143.3 172 50.6
Sopen10g035010 Solanum pennellii HOM05D006439 ORTHO05D008152 2.1e-32 143.3 175 49.1
Cpa.g.sc5.59 Carica papaya HOM05D006439 ORTHO05D008152 1.8e-31 140.2 172 48.8
RcHm_v2.0_Chr3g0472491 Rosa chinensis HOM05D006439 ORTHO05D008152 1.8e-31 140.2 171 50.3
Ca_08981_v3 Cicer arietinum L. HOM05D006439 ORTHO05D008152 5.2e-31 138.7 174 44.8
Manes.08G022900 Manihot esculenta HOM05D006439 ORTHO05D008152 5.2e-31 138.7 175 49.7
ECA233G3232 Erigeron canadensis HOM05D006439 ORTHO05D008152 6.7e-31 138.3 175 45.1
Cc06_g05440 Coffea canephora HOM05D006439 ORTHO05D008152 1.2e-30 137.5 171 50.3
SGA_v2.0_scaffold184G39949 Striga asiatica HOM05D006439 ORTHO05D008152 1.5e-30 137.1 170 47.6
MD12G1021400 Malus domestica HOM05D006439 ORTHO05D008152 5.7e-30 135.2 175 49.1
Gohir.D11G340900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 2.2e-29 133.3 171 50.3
Gorai.007G371000 Gossypium raimondii HOM05D006439 ORTHO05D008152 2.2e-29 133.3 171 50.3
arahy.Tifrunner.gnm1.ann1.YQ8CLY Arachis hypogaea HOM05D006439 ORTHO05D008152 3.7e-29 132.5 172 45.3
Gohir.A11G321900 Gossypium hirsutum HOM05D006439 ORTHO05D008152 8.2e-29 131.3 171 49.7
TPR.G19544 Trifolium pratense HOM05D006439 ORTHO05D008152 8.2e-29 131.3 172 44.2
Medtr7g104170 Medicago truncatula HOM05D006439 ORTHO05D008152 1.4e-28 130.6 174 44.8
THA.LOC104823488 Tarenaya hassleriana HOM05D006439 ORTHO05D008152 1.4e-28 130.6 177 46.3
Lj1g0012097 Lotus japonicus HOM05D006439 ORTHO05D008152 1.8e-28 130.2 173 43.9
Lalb_Chr01g0018261 Lupinus albus HOM05D006439 ORTHO05D008152 1.8e-28 130.2 182 41.8
arahy.Tifrunner.gnm1.ann1.JQB9X3 Arachis hypogaea HOM05D006439 ORTHO05D008152 2.4e-28 129.8 172 44.8
Sp4g18660 Schrenkiella parvula HOM05D006439 ORTHO05D008152 3.1e-28 129.4 172 46.5
Nn2g14057 Nelumbo nucifera HOM05D006439 ORTHO05D008152 5.3e-28 128.6 169 43.2
VMungo1383G0775 Vigna mungo HOM05D006439 ORTHO05D008152 5.3e-28 128.6 179 43.6
Psat3g034720 Pisum sativum HOM05D006439 ORTHO05D008152 7.0e-28 128.3 174 43.7
TWI74G0883 Tripterygium wilfordii HOM05D006439 ORTHO05D008152 7.0e-28 128.3 168 47.6
HanXRQChr09g0247281 Helianthus annuus HOM05D006439 ORTHO05D008152 9.1e-28 127.9 172 50.0
Phvul.001G188000 Phaseolus vulgaris HOM05D006439 ORTHO05D008152 1.6e-27 127.1 179 44.1
VMungo1127G2301 Vigna mungo HOM05D006439 ORTHO05D008152 2.0e-27 126.7 179 43.6
Glyma.03G192900 Glycine max HOM05D006439 ORTHO05D008152 1.0e-26 124.4 171 42.7
A04p27880 Brassica napus HOM05D006439 ORTHO05D008152 2.2e-26 123.2 172 44.8
Aqoxy2G01352 Aquilegia oxysepala HOM05D006439 ORTHO05D008152 2.9e-26 122.9 172 41.9
BolC4t28018H Brassica oleracea HOM05D006439 ORTHO05D008152 2.9e-26 122.9 172 45.3
BraA04t18280Z Brassica rapa HOM05D006439 ORTHO05D008152 5.0e-26 122.1 172 45.3
Sc07g0005420 Simmondsia chinensis HOM05D006439 ORTHO05D008152 1.5e-25 120.6 176 47.7
FAN14G3294 Fragaria x ananassa HOM05D006439 ORTHO05D008152 1.9e-25 120.2 173 46.8
BcaB06g28933 Brassica carinata HOM05D006439 ORTHO05D008152 3.2e-25 119.4 172 44.2
FAN02G3052 Fragaria x ananassa HOM05D006439 ORTHO05D008152 5.5e-25 118.6 173 45.7
SalBow5G0766 Salvia bowleyana HOM05D006439 ORTHO05D008152 9.4e-25 117.9 162 46.9
BcaC02g07604 Brassica carinata HOM05D006439 ORTHO05D008152 1.6e-24 117.1 172 44.8
Lsat_1_v5_gn_6_69500 Lactuca sativa HOM05D006439 ORTHO05D008152 6.1e-24 115.2 176 44.9
EL10Ac7g16960 Beta vulgaris HOM05D006439 ORTHO05D008152 1.2e-22 110.9 175 44.6
Thhalv10017885m.g Eutrema salsugineum HOM05D006439 ORTHO05D008152 1.5e-22 110.5 172 43.0
CARHR130670 Cardamine hirsuta HOM05D006439 ORTHO05D008152 2.0e-22 110.2 172 44.8
Aa31LG5G21550 Aethionema arabicum HOM05D006439 ORTHO05D008152 3.4e-22 109.4 173 42.2
Dinv21234 Davidia involucrata HOM05D006439 ORTHO05D008152 2.8e-21 106.3 107 52.3
AUR62028585 Chenopodium quinoa HOM05D006439 ORTHO05D008152 1.4e-20 104.0 174 43.1
PSO384G3820 Papaver somniferum HOM05D006439 ORTHO05D008152 1.4e-20 104.0 170 40.6
PGR142G3529 Punica granatum HOM05D006439 ORTHO05D008152 2.4e-20 103.2 178 41.6
AL4G32530 Arabidopsis lyrata HOM05D006439 ORTHO05D008152 2.7e-19 99.8 172 40.7
PSO801G0048 Papaver somniferum HOM05D006439 ORTHO05D008152 2.7e-19 99.8 176 39.2
AT2G36370 Arabidopsis thaliana HOM05D006439 ORTHO05D008152 1.0e-18 97.8 172 40.1
Ah.15g091040 Amaranthus hybridus HOM05D006439 ORTHO05D008152 1.5e-17 94.0 137 46.7
HPP92_005462 Vanilla planifolia HOM05D006439 ORTHO05D008152 2.6e-14 83.2 129 40.3
Zm00001eb139990 Zea mays HOM05D006439 ORTHO05D008152 1.3e-13 80.9 127 39.4
Carub.0004s1816 Capsella rubella HOM05D006439 ORTHO05D008152 9.5e-09 64.7 91 42.9
Os01g0968600 Oryza sativa ssp. japonica HOM05D006439 ORTHO05D008152 1.2e-08 64.3 125 36.0
SEGI_31112 Sequoiadendron giganteum HOM05D006439 ORTHO05D008152 1.5e-06 57.4 128 32.0


User provided reference genes

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