Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030355 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 5.7e-101 370.9 188 100.0
CSS0038628 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 1.4e-99 366.3 188 99.5
CSS0006956 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.0e-86 322.0 188 90.4
CSS0018747 Camellia sinensis var. sinensis HOM05D017996 ORTHO05D017165 3.0e-86 322.0 188 90.4
vmacro12771 Vaccinium macrocarpon HOM05D017996 ORTHO05D017165 1.4e-27 127.1 183 49.2
Actinidia06596 Actinidia chinensis HOM05D010873 ORTHO05D013124 9.2e-27 124.4 166 46.4
Rhsim10G0129700 Rhododendron simsii HOM05D017996 ORTHO05D017165 2.5e-24 116.3 166 48.2
Sabra07G0081700 Salix brachista HOM05D012218 ORTHO05D017165 1.0e-17 94.4 134 45.5
Potri.007G098300 Populus trichocarpa HOM05D012218 ORTHO05D017165 1.9e-16 90.1 160 41.2
Cfa001988 Carpinus fangiana HOM05D012473 ORTHO05D010844 2.9e-12 76.3 135 38.5
TAR381G1694 Trochodendron aralioides HOM05D012218 ORTHO05D010844 6.4e-12 75.1 147 38.1
CiPaw.03G115200 Carya illinoinensis HOM05D012218 ORTHO05D010844 1.1e-11 74.3 178 33.7
QL02p071969 Quercus lobata HOM05D012473 ORTHO05D010844 1.1e-11 74.3 159 38.4
Dinv07458 Davidia involucrata HOM05D010873 ORTHO05D013124 3.2e-11 72.8 108 47.2
Haze_16528 Corylus avellana HOM05D012473 ORTHO05D010844 1.2e-10 70.9 135 35.6
FAN28G1165 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.6e-10 70.5 156 33.3
FAN23G1528 Fragaria x ananassa HOM05D012473 ORTHO05D010844 6.0e-10 68.6 156 33.3
FAN26G1572 Fragaria x ananassa HOM05D012473 ORTHO05D010844 1.3e-09 67.4 141 33.3
Nitab4.5_0000350g0130 Nicotiana tabacum HOM05D010873 ORTHO05D013124 1.5e-08 63.9 169 33.7
Thecc.01G142200 Theobroma cacao HOM05D012218 ORTHO05D010844 3.3e-08 62.8 149 32.9
QL10p005044 Quercus lobata HOM05D012473 ORTHO05D010844 9.6e-08 61.2 184 31.5
Atru.chr6.1276 Acer truncatum HOM05D017996 ORTHO05D017165 2.4e-06 56.6 144 36.8
Sopen05g004330 Solanum pennellii HOM05D010873 ORTHO05D013124 3.1e-06 56.2 166 31.3
CAN.G1489.12 Capsicum annuum HOM05D010873 ORTHO05D013124 4.0e-06 55.8 165 32.1


User provided reference genes

Program Settings