Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030340 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 1.1e-74 283.1 137 100.0
CSS0011850 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 6.5e-54 214.2 131 83.2
CSS0016825 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.5e-52 208.4 131 81.7
CSS0018708 Camellia sinensis var. sinensis HOM05D005792 ORTHO05D007171 3.5e-52 208.4 131 81.7
Dinv39569 Davidia involucrata HOM05D005792 ORTHO05D007171 1.7e-46 189.5 131 72.5
Rhsim06G0009800 Rhododendron simsii HOM05D005792 ORTHO05D007171 3.8e-46 188.3 131 71.0
vmacro21840 Vaccinium macrocarpon HOM05D005792 ORTHO05D007171 1.1e-45 186.8 134 68.7
Cfa014030 Carpinus fangiana HOM05D000201 ORTHO05D004673 9.4e-45 183.7 130 70.0
Haze_22722 Corylus avellana HOM05D005792 ORTHO05D007171 2.1e-44 182.6 131 69.5
Manes.18G007700 Manihot esculenta HOM05D005792 ORTHO05D007171 2.1e-44 182.6 131 69.5
Actinidia15473 Actinidia chinensis HOM05D005792 ORTHO05D007171 1.4e-43 179.9 130 68.5
Potri.005G247600 Populus trichocarpa HOM05D005792 ORTHO05D007171 1.4e-43 179.9 131 67.2
Haze_22736 Corylus avellana HOM05D005792 ORTHO05D007171 1.8e-43 179.5 129 68.2
Lj4C15T2 Lonicera japonica HOM05D005792 ORTHO05D007171 1.8e-43 179.5 131 67.2
Solyc12g094450.3 Solanum lycopersicum HOM05D005792 ORTHO05D007171 3.9e-43 178.3 131 68.7
CiPaw.08G070700 Carya illinoinensis HOM05D005792 ORTHO05D007171 5.1e-43 177.9 131 66.4
Thecc.08G054700 Theobroma cacao HOM05D005792 ORTHO05D007171 5.1e-43 177.9 131 67.2
Atru.chr13.181 Acer truncatum HOM05D005792 ORTHO05D007171 8.8e-43 177.2 131 66.4
Peaxi162Scf00064g00910 Petunia axillaris HOM05D005792 ORTHO05D007171 8.8e-43 177.2 131 69.5
CANSAT51G0003 Cannabis sativa HOM05D005792 ORTHO05D007171 1.1e-42 176.8 131 65.6
Migut.C00916 Erythranthe guttata HOM05D005792 ORTHO05D007171 1.1e-42 176.8 131 67.2
GSVIVG01008709001 Vitis vinifera HOM05D005792 ORTHO05D007171 1.1e-42 176.8 131 66.4
CiPaw.08G070500 Carya illinoinensis HOM05D005792 ORTHO05D007171 1.5e-42 176.4 131 66.4
Nitab4.5_0000498g0200 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.5e-42 176.4 131 68.7
TWI36G1625 Tripterygium wilfordii HOM05D005792 ORTHO05D007171 2.5e-42 175.6 131 64.9
Gohir.D05G256800 Gossypium hirsutum HOM05D005792 ORTHO05D007171 3.3e-42 175.3 131 65.6
Hund05134 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.3e-42 175.3 131 66.4
TAR625G0413 Trochodendron aralioides HOM05D005792 ORTHO05D007171 3.3e-42 175.3 131 67.2
Ciclev10001939m.g Citrus clementina HOM05D005792 ORTHO05D007171 5.7e-42 174.5 131 66.4
Glyma.04G019600 Glycine max HOM05D005792 ORTHO05D007171 5.7e-42 174.5 131 64.1
Hma1.2p1_1260F.1_g270990 Hydrangea macrophylla HOM05D005792 ORTHO05D007171 9.7e-42 173.7 131 67.9
Prupe.1G357300 Prunus persica HOM05D005792 ORTHO05D007171 9.7e-42 173.7 131 64.9
CAN.G401.3 Capsicum annuum HOM05D005792 ORTHO05D007171 1.3e-41 173.3 131 67.2
Lalb_Chr23g0265871 Lupinus albus HOM05D005792 ORTHO05D007171 1.3e-41 173.3 131 65.6
Nitab4.5_0002353g0010 Nicotiana tabacum HOM05D005792 ORTHO05D007171 1.3e-41 173.3 129 67.4
Glyma.06G019900 Glycine max HOM05D005792 ORTHO05D007171 1.7e-41 172.9 131 64.1
Gorai.009G268300 Gossypium raimondii HOM05D005792 ORTHO05D007171 1.7e-41 172.9 131 64.9
HanXRQChr14g0429001 Helianthus annuus HOM05D005792 ORTHO05D007171 1.7e-41 172.9 129 65.9
Sopen12g031340 Solanum pennellii HOM05D005792 ORTHO05D007171 1.7e-41 172.9 131 67.2
Cc10_g00990 Coffea canephora HOM05D005792 ORTHO05D007171 2.2e-41 172.6 131 66.4
TAR625G0324 Trochodendron aralioides HOM05D005792 ORTHO05D007171 2.2e-41 172.6 131 66.4
EL10Ac1g02028 Beta vulgaris HOM05D005792 ORTHO05D007171 3.7e-41 171.8 131 64.9
Duzib093G0813 Durio zibethinus HOM05D005792 ORTHO05D007171 3.7e-41 171.8 131 64.9
QL02p013536 Quercus lobata HOM05D005792 ORTHO05D007171 3.7e-41 171.8 130 65.4
MELO3C011330.2 Cucumis melo HOM05D005792 ORTHO05D007171 4.8e-41 171.4 137 59.9
unitig_747.g21523 Utricularia gibba HOM05D005792 ORTHO05D007171 4.8e-41 171.4 129 65.9
VMungo1309G0997 Vigna mungo HOM05D005792 ORTHO05D007171 4.8e-41 171.4 131 64.1
Ah.11g040640 Amaranthus hybridus HOM05D005792 ORTHO05D007171 6.3e-41 171.0 131 62.6
Eucgr.F01710 Eucalyptus grandis HOM05D005792 ORTHO05D007171 8.2e-41 170.6 131 62.6
Gohir.A05G255200 Gossypium hirsutum HOM05D005792 ORTHO05D007171 8.2e-41 170.6 131 64.9
Nn5g30890 Nelumbo nucifera HOM05D005792 ORTHO05D007171 1.1e-40 170.2 131 64.9
CsaV3_2G024540 Cucumis sativus L. HOM05D005792 ORTHO05D007171 1.8e-40 169.5 131 62.6
DCAR_016749 Daucus carota HOM05D005792 ORTHO05D007171 2.4e-40 169.1 131 64.9
AUR62013837 Chenopodium quinoa HOM05D005792 ORTHO05D007171 3.1e-40 168.7 131 62.6
Sp5g31280 Schrenkiella parvula HOM05D005792 ORTHO05D007171 3.1e-40 168.7 131 62.6
Lj1g0011663 Lotus japonicus HOM05D005792 ORTHO05D007171 4.1e-40 168.3 131 63.4
PGR083G0297 Punica granatum HOM05D005792 ORTHO05D007171 4.1e-40 168.3 131 64.9
Atru.chr13.183 Acer truncatum HOM05D005792 ORTHO05D007171 5.3e-40 167.9 130 64.6
A07p41720 Brassica napus HOM05D005792 ORTHO05D007171 5.3e-40 167.9 131 62.6
BraA07t31701Z Brassica rapa HOM05D005792 ORTHO05D007171 5.3e-40 167.9 131 62.6
BcaC08g47286 Brassica carinata HOM05D005792 ORTHO05D007171 6.9e-40 167.5 131 61.8
C06p50100 Brassica napus HOM05D005792 ORTHO05D007171 6.9e-40 167.5 131 61.8
ClCG08G013930 Citrullus lanatus HOM05D005792 ORTHO05D007171 6.9e-40 167.5 152 56.6
DCAR_013899 Daucus carota HOM05D005792 ORTHO05D007171 1.2e-39 166.8 131 63.4
Sed0026749 Sechium edule HOM05D005792 ORTHO05D007171 1.2e-39 166.8 131 61.1
Sc26g0004560 Simmondsia chinensis HOM05D005792 ORTHO05D007171 1.2e-39 166.8 131 62.6
BcaNung05119 Brassica carinata HOM05D005792 ORTHO05D007171 1.5e-39 166.4 131 61.8
CARHR069700 Cardamine hirsuta HOM05D005792 ORTHO05D007171 2.0e-39 166.0 131 62.6
Sed0027939 Sechium edule HOM05D005792 ORTHO05D007171 2.0e-39 166.0 131 61.1
AUR62036768 Chenopodium quinoa HOM05D005792 ORTHO05D007171 2.6e-39 165.6 131 62.6
SalBow7G0964 Salvia bowleyana HOM05D005792 ORTHO05D007171 2.6e-39 165.6 118 69.5
ECA238G1749 Erigeron canadensis HOM05D005792 ORTHO05D007171 3.4e-39 165.2 123 64.2
RcHm_v2.0_Chr6g0303911 Rosa chinensis HOM05D005792 ORTHO05D007171 3.4e-39 165.2 131 62.6
Thhalv10018917m.g Eutrema salsugineum HOM05D005792 ORTHO05D007171 4.5e-39 164.9 131 60.3
FvH4_2g37800 Fragaria vesca HOM05D005792 ORTHO05D007171 4.5e-39 164.9 131 63.4
MD08G1005200 Malus domestica HOM05D005792 ORTHO05D007171 4.5e-39 164.9 131 61.8
THA.LOC104813765 Tarenaya hassleriana HOM05D005792 ORTHO05D007171 5.9e-39 164.5 131 61.1
AT1G76150 Arabidopsis thaliana HOM05D005792 ORTHO05D007171 7.7e-39 164.1 131 60.3
MBI08_g05391_MAGBIO Magnolia biondii HOM05D005792 ORTHO05D007171 7.7e-39 164.1 131 61.8
BolC6t40050H Brassica oleracea HOM05D005792 ORTHO05D007171 1.0e-38 163.7 131 61.8
Carub.0002s2304 Capsella rubella HOM05D005792 ORTHO05D007171 1.3e-38 163.3 131 60.3
AL2G36210 Arabidopsis lyrata HOM05D005792 ORTHO05D007171 1.7e-38 162.9 131 59.5
Lsat_1_v5_gn_2_5940 Lactuca sativa HOM05D005792 ORTHO05D007171 2.9e-38 162.2 132 62.9
PSO541G2987 Papaver somniferum HOM05D005792 ORTHO05D007171 3.8e-38 161.8 131 61.8
Manes.05G141100 Manihot esculenta HOM05D005792 ORTHO05D007171 6.5e-38 161.0 133 62.4
PSO675G2870 Papaver somniferum HOM05D005792 ORTHO05D007171 6.5e-38 161.0 131 61.1
arahy.Tifrunner.gnm1.ann1.NZM2IS Arachis hypogaea HOM05D005792 ORTHO05D007171 8.5e-38 160.6 131 60.3
PGSC0003DMG400029326 Solanum tuberosum HOM05D005792 ORTHO05D007171 1.1e-37 160.2 160 55.6
Medtr3g115040 Medicago truncatula HOM05D005792 ORTHO05D007171 1.4e-37 159.8 131 61.1
Ca_15448_v3 Cicer arietinum L. HOM05D005792 ORTHO05D007171 1.9e-37 159.5 131 60.3
Nitab4.5_0000588g0300 Nicotiana tabacum HOM05D005792 ORTHO05D007171 4.2e-37 158.3 131 63.4
Aa31LG4G6270 Aethionema arabicum HOM05D005792 ORTHO05D007171 5.5e-37 157.9 131 58.8
Os09g0544900 Oryza sativa ssp. japonica HOM05D005792 ORTHO05D007171 5.5e-37 157.9 131 58.8
SEGI_22358 Sequoiadendron giganteum HOM05D005792 ORTHO05D007171 5.5e-37 157.9 131 58.8
Atru.chr1.2256 Acer truncatum HOM05D005792 ORTHO05D007171 9.4e-37 157.1 131 59.5
Psat5g010960 Pisum sativum HOM05D005792 ORTHO05D007171 9.4e-37 157.1 131 59.5
Aqoxy6G01867 Aquilegia oxysepala HOM05D005792 ORTHO05D007171 2.1e-36 156.0 131 58.8
Sabra02G0010800 Salix brachista HOM05D005792 ORTHO05D007171 3.6e-36 155.2 99 74.7
TPR.G38109 Trifolium pratense HOM05D005792 ORTHO05D007171 3.6e-36 155.2 131 59.5
Gohir.D02G118150 Gossypium hirsutum HOM05D005792 ORTHO05D007171 1.0e-35 153.7 131 58.0
Zm00001eb104070 Zea mays HOM05D005792 ORTHO05D007171 1.4e-35 153.3 130 56.9
ATR0661G150 Amborella trichopoda HOM05D005792 ORTHO05D007171 3.0e-35 152.1 131 58.8
Duzib116G0262 Durio zibethinus HOM05D005792 ORTHO05D007171 2.2e-33 146.0 102 68.6
FAN15G3656 Fragaria x ananassa HOM05D000201 ORTHO05D004673 5.0e-30 134.8 131 55.0
FAN27G1567 Fragaria x ananassa HOM05D000201 ORTHO05D004673 1.4e-29 133.3 131 55.0
SalBow6G2635 Salvia bowleyana HOM05D005792 ORTHO05D007171 1.9e-29 132.9 81 76.5
Pp3c4_24330 Physcomitrium patens HOM05D005792 ORTHO05D007171 1.8e-27 126.3 133 51.1
AagrBONN_evm.TU.Sc2ySwM_117.3246 Anthoceros agrestis HOM05D005792 ORTHO05D007171 5.7e-26 121.3 133 47.4
SGA_v2.0_scaffold351G49656 Striga asiatica HOM05D005792 ORTHO05D007171 7.4e-26 120.9 138 52.2
SMO174G0111 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.7e-25 119.8 130 50.8
BcaC08g47109 Brassica carinata HOM05D005792 ORTHO05D007171 7.0e-24 114.4 123 48.8
Mapoly0135s0031 Marchantia polymorpha HOM05D005792 ORTHO05D007171 1.7e-22 109.8 131 45.0
SHI08027 Sapria himalayana HOM05D005792 ORTHO05D007171 2.7e-20 102.4 120 45.0
Hund05135 Selenicereus undatus HOM05D005792 ORTHO05D007171 3.6e-20 102.1 56 76.8
CBR_g50912 Chara braunii HOM05D005792 ORTHO05D007171 1.0e-19 100.5 152 40.8
CBR_g22029 Chara braunii HOM05D005792 ORTHO05D007171 6.8e-19 97.8 154 39.0
SMO174G0016 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 7.5e-18 94.4 85 56.5
Cre06.g308100 Chlamydomonas reinhardtii HOM05D005792 ORTHO05D007171 1.2e-12 77.0 99 40.4
Haze_26844 Corylus avellana HOM05D005792 ORTHO05D007171 1.0e-11 73.9 134 35.8
SMO174G0053 Selaginella moellendorffii HOM05D005792 ORTHO05D007171 1.8e-11 73.2 80 50.0
Cpa.g.sc26.236 Carica papaya HOM05D005792 ORTHO05D007171 7.7e-07 57.8 36 77.8
Mapoly0033s0029 Marchantia polymorpha HOM05D005792 ORTHO05D007171 2.9e-06 55.8 53 43.4
COL.COLO4_26053 Corchorus olitorius HOM05D005792 ORTHO05D007171 3.8e-06 55.5 133 31.6


User provided reference genes

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