Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030337 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 0.0e+00 1095.1 560 100.0
CSS0027312 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 0.0e+00 1082.8 560 99.3
Rhsim09G0128800 Rhododendron simsii HOM05D004955 ORTHO05D005965 1.3e-270 936.0 560 84.8
vmacro21668 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 1.4e-267 926.0 559 84.4
Dinv28916 Davidia involucrata HOM05D004955 ORTHO05D005965 3.8e-262 907.9 560 81.6
CSS0006893 Camellia sinensis var. sinensis HOM05D004955 ORTHO05D005965 8.3e-257 890.2 498 91.4
Potri.001G146900 Populus trichocarpa HOM05D004955 ORTHO05D005965 3.2e-248 861.7 560 77.7
GSVIVG01013229001 Vitis vinifera HOM05D004955 ORTHO05D005965 7.8e-247 857.1 560 78.0
GSVIVG01011242001 Vitis vinifera HOM05D004955 ORTHO05D005965 5.0e-246 854.4 560 77.1
vmacro00352 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 6.6e-246 854.0 539 82.0
QL12p007112 Quercus lobata HOM05D004955 ORTHO05D005965 1.9e-245 852.4 561 77.2
Lj3A396G10 Lonicera japonica HOM05D004955 ORTHO05D005965 2.5e-245 852.0 590 73.9
RcHm_v2.0_Chr7g0208321 Rosa chinensis HOM05D004955 ORTHO05D005965 1.4e-243 846.3 561 76.8
Prupe.5G046300 Prunus persica HOM05D004955 ORTHO05D005965 5.2e-243 844.3 561 76.6
Actinidia25945 Actinidia chinensis HOM05D004955 ORTHO05D005965 5.8e-242 840.9 560 78.8
Nitab4.5_0002055g0140 Nicotiana tabacum HOM05D004955 ORTHO05D005965 9.8e-242 840.1 560 75.7
Sabra01G0115600 Salix brachista HOM05D004955 ORTHO05D005965 2.9e-241 838.6 560 76.1
MD06G1040100 Malus domestica HOM05D004955 ORTHO05D005965 3.7e-241 838.2 562 75.8
TAR375G0042 Trochodendron aralioides HOM05D004955 ORTHO05D005965 5.4e-240 834.3 561 75.6
FvH4_5g21180 Fragaria vesca HOM05D004955 ORTHO05D005965 7.0e-240 833.9 559 75.7
Sopen08g025850 Solanum pennellii HOM05D004955 ORTHO05D005965 1.6e-239 832.8 560 75.7
Solyc08g077270.4 Solanum lycopersicum HOM05D004955 ORTHO05D005965 1.3e-238 829.7 560 75.2
Peaxi162Scf00084g00922 Petunia axillaris HOM05D004955 ORTHO05D005965 2.3e-238 828.9 587 72.1
COL.COLO4_17563 Corchorus olitorius HOM05D004955 ORTHO05D005965 8.6e-238 827.0 560 74.6
MSTRG.1970 Avicennia marina HOM05D004955 ORTHO05D005965 1.1e-237 826.6 560 75.4
Duzib213G0438 Durio zibethinus HOM05D004955 ORTHO05D005965 1.1e-237 826.6 560 74.3
FAN08G3652 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.5e-237 826.2 561 75.4
DCAR_005602 Daucus carota HOM05D004955 ORTHO05D005965 1.9e-237 825.9 555 75.1
Thecc.07G110200 Theobroma cacao HOM05D004955 ORTHO05D005965 2.5e-237 825.5 560 74.8
FAN18G2324 Fragaria x ananassa HOM05D004955 ORTHO05D005965 5.6e-237 824.3 578 73.2
SalBow6G1446 Salvia bowleyana HOM05D004955 ORTHO05D005965 2.1e-236 822.4 560 73.2
CAN.G799.17 Capsicum annuum HOM05D004955 ORTHO05D005965 6.2e-236 820.8 560 74.6
arahy.Tifrunner.gnm1.ann1.JVPY2N Arachis hypogaea HOM05D004955 ORTHO05D005965 4.0e-235 818.1 557 74.7
arahy.Tifrunner.gnm1.ann1.U6D9EY Arachis hypogaea HOM05D004955 ORTHO05D005965 4.0e-235 818.1 557 74.7
Ciclev10031124m.g Citrus clementina HOM05D004955 ORTHO05D005965 6.8e-235 817.4 561 75.0
VMungo1215G2917 Vigna mungo HOM05D004955 ORTHO05D005965 2.0e-234 815.8 562 74.2
Gorai.002G043000 Gossypium raimondii HOM05D004955 ORTHO05D005965 5.8e-234 814.3 560 73.2
Cpa.g.sc39.114 Carica papaya HOM05D004955 ORTHO05D005965 9.8e-234 813.5 560 72.9
Lj2g0012431 Lotus japonicus HOM05D004955 ORTHO05D005965 1.7e-233 812.8 557 73.8
Ca_24631_v3 Cicer arietinum L. HOM05D004955 ORTHO05D005965 2.9e-233 812.0 562 73.8
Gohir.D01G034800 Gossypium hirsutum HOM05D004955 ORTHO05D005965 3.7e-233 811.6 560 72.9
Oeu039341.2 Olea europaea HOM05D004955 ORTHO05D005965 8.3e-233 810.4 584 71.2
FAN13G2236 Fragaria x ananassa HOM05D004955 ORTHO05D005965 1.1e-232 810.1 580 72.2
Glyma.20G095000 Glycine max HOM05D004955 ORTHO05D005965 1.4e-232 809.7 562 74.6
Migut.E00912 Erythranthe guttata HOM05D004955 ORTHO05D005965 3.2e-232 808.5 557 74.9
Migut.E00798 Erythranthe guttata HOM05D004955 ORTHO05D005965 7.1e-232 807.4 557 74.7
Gohir.A01G044000 Gossypium hirsutum HOM05D004955 ORTHO05D005965 7.1e-232 807.4 560 72.3
CiPaw.12G060300 Carya illinoinensis HOM05D004955 ORTHO05D005965 9.2e-232 807.0 560 73.8
Nn1g00613 Nelumbo nucifera HOM05D004955 ORTHO05D005965 1.2e-231 806.6 561 74.3
Psat2g174720 Pisum sativum HOM05D004955 ORTHO05D005965 2.7e-231 805.4 562 73.7
TWI81G0724 Tripterygium wilfordii HOM05D004955 ORTHO05D005965 2.7e-231 805.4 561 73.4
EL10Ac5g12196 Beta vulgaris HOM05D004955 ORTHO05D005965 4.6e-231 804.7 560 72.9
Phvul.002G003600 Phaseolus vulgaris HOM05D004955 ORTHO05D005965 1.0e-230 803.5 562 73.3
Medtr5g013970 Medicago truncatula HOM05D004955 ORTHO05D005965 8.6e-230 800.4 557 74.0
Cc05_g03300 Coffea canephora HOM05D004955 ORTHO05D005965 2.5e-229 798.9 560 73.4
MBI04_g44837_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 5.6e-229 797.7 578 72.5
Glyma.07G096600 Glycine max HOM05D004955 ORTHO05D005965 7.3e-229 797.3 564 73.4
PGR031G1993 Punica granatum HOM05D004955 ORTHO05D005965 6.2e-228 794.3 561 73.1
FAN04G2254 Fragaria x ananassa HOM05D004955 ORTHO05D005965 8.1e-228 793.9 559 73.3
Sc07g0008830 Simmondsia chinensis HOM05D004955 ORTHO05D005965 1.2e-226 790.0 560 71.2
Atru.BG.31.p Acer truncatum HOM05D004955 ORTHO05D005965 2.6e-226 788.9 537 75.2
Hund14430 Selenicereus undatus HOM05D004955 ORTHO05D005965 5.8e-226 787.7 570 71.6
Aqoxy3G03106 Aquilegia oxysepala HOM05D004955 ORTHO05D005965 1.4e-224 783.1 588 68.9
MD16G1269200 Malus domestica HOM05D004955 ORTHO05D005965 1.3e-222 776.5 568 71.1
PSO063G1154 Papaver somniferum HOM05D004955 ORTHO05D005965 2.3e-222 775.8 562 70.3
Haze_07894 Corylus avellana HOM05D004955 ORTHO05D005965 3.0e-222 775.4 561 71.7
Nitab4.5_0006693g0050 Nicotiana tabacum HOM05D004955 ORTHO05D005965 1.1e-221 773.5 517 76.0
PSO017G5366 Papaver somniferum HOM05D004955 ORTHO05D005965 1.5e-221 773.1 562 70.3
Manes.15G172800 Manihot esculenta HOM05D004955 ORTHO05D005965 2.5e-221 772.3 508 76.6
AUR62018770 Chenopodium quinoa HOM05D004955 ORTHO05D005965 3.3e-221 771.9 560 70.9
AUR62007230 Chenopodium quinoa HOM05D004955 ORTHO05D005965 1.6e-220 769.6 560 71.1
CsaV3_1G038770 Cucumis sativus L. HOM05D004955 ORTHO05D005965 2.1e-220 769.2 563 69.6
Eucgr.D02153 Eucalyptus grandis HOM05D004955 ORTHO05D005965 6.2e-220 767.7 556 71.8
PSO541G5086 Papaver somniferum HOM05D004955 ORTHO05D005965 4.0e-219 765.0 562 68.9
Lsat_1_v5_gn_6_66461 Lactuca sativa HOM05D004955 ORTHO05D005965 1.5e-218 763.1 560 71.6
MBI04_g29834_MAGBIO Magnolia biondii HOM05D004955 ORTHO05D005965 2.0e-218 762.7 568 71.0
Sed0006321 Sechium edule HOM05D004955 ORTHO05D005965 9.9e-218 760.4 561 70.2
MELO3C015301.2 Cucumis melo HOM05D004955 ORTHO05D005965 1.7e-217 759.6 563 69.8
HanXRQChr14g0455871 Helianthus annuus HOM05D004955 ORTHO05D005965 2.4e-216 755.7 540 72.0
AUR62001104 Chenopodium quinoa HOM05D004955 ORTHO05D005965 6.0e-215 751.1 562 69.9
CANSAT80G1132 Cannabis sativa HOM05D004955 ORTHO05D005965 1.1e-213 746.9 560 68.8
Aa31LG9G15390 Aethionema arabicum HOM05D004955 ORTHO05D005965 2.5e-213 745.7 564 69.0
PGSC0003DMG400024224 Solanum tuberosum HOM05D004955 ORTHO05D005965 3.4e-210 735.3 498 74.9
ECA233G2813 Erigeron canadensis HOM05D004955 ORTHO05D005965 1.3e-209 733.4 560 67.5
THA.LOC104814429 Tarenaya hassleriana HOM05D004955 ORTHO05D005965 3.8e-209 731.9 559 68.2
ATR0829G014 Amborella trichopoda HOM05D004955 ORTHO05D005965 4.9e-209 731.5 559 66.5
ClCG03G017340 Citrullus lanatus HOM05D004955 ORTHO05D005965 4.9e-209 731.5 560 67.9
CARHR195050 Cardamine hirsuta HOM05D004955 ORTHO05D005965 3.0e-206 722.2 560 68.2
SGA_v2.0_scaffold18G08384 Striga asiatica HOM05D004955 ORTHO05D005965 5.1e-206 721.5 494 73.5
HPP92_017500 Vanilla planifolia HOM05D004955 ORTHO05D005965 6.7e-206 721.1 558 66.7
Carub.0006s1636 Capsella rubella HOM05D004955 ORTHO05D005965 6.2e-204 714.5 562 67.6
Thhalv10013080m.g Eutrema salsugineum HOM05D004955 ORTHO05D005965 6.2e-204 714.5 561 66.8
AL6G29260 Arabidopsis lyrata HOM05D004955 ORTHO05D005965 5.3e-203 711.4 559 67.1
AT5G18070 Arabidopsis thaliana HOM05D004955 ORTHO05D005965 6.9e-203 711.1 559 66.7
Lalb_Chr16g0379231 Lupinus albus HOM05D004955 ORTHO05D005965 6.9e-203 711.1 500 72.6
BraA10t44206Z Brassica rapa HOM05D004955 ORTHO05D005965 2.9e-201 705.7 558 65.6
Sp6g26230 Schrenkiella parvula HOM05D004955 ORTHO05D005965 3.8e-201 705.3 561 66.1
C09p58920 Brassica napus HOM05D004955 ORTHO05D005965 4.9e-201 704.9 559 65.5
BcaC04g18728 Brassica carinata HOM05D004955 ORTHO05D005965 2.4e-200 702.6 559 65.7
A10p21440 Brassica napus HOM05D004955 ORTHO05D005965 1.8e-198 696.4 559 65.5
BolC9t58736H Brassica oleracea HOM05D004955 ORTHO05D005965 3.9e-198 695.3 558 65.2
SEGI_00537 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 2.8e-196 689.1 555 65.4
BraA03t10187Z Brassica rapa HOM05D004955 ORTHO05D005965 8.4e-193 677.6 559 64.4
A03p08630 Brassica napus HOM05D004955 ORTHO05D005965 1.1e-192 677.2 558 64.3
C03p10070 Brassica napus HOM05D004955 ORTHO05D005965 2.5e-192 676.0 559 64.4
unitig_21.g20378 Utricularia gibba HOM05D004955 ORTHO05D005965 4.6e-191 671.8 543 65.2
Zm00001eb119880 Zea mays HOM05D004955 ORTHO05D005965 5.1e-190 668.3 551 62.3
BcaB01g05173 Brassica carinata HOM05D004955 ORTHO05D005965 1.6e-188 663.3 559 63.5
BolC3t13493H Brassica oleracea HOM05D004955 ORTHO05D005965 1.6e-188 663.3 559 63.5
Os07g0195400 Oryza sativa ssp. japonica HOM05D004955 ORTHO05D005965 1.4e-187 660.2 537 61.5
Haze_08303 Corylus avellana HOM05D004955 ORTHO05D005965 1.8e-179 633.3 428 75.5
BcaB08g36711 Brassica carinata HOM05D004955 ORTHO05D005965 3.0e-174 615.9 560 60.4
Dinv25184 Davidia involucrata HOM05D004955 ORTHO05D005965 1.7e-169 600.1 401 77.1
SHI01417 Sapria himalayana HOM05D004955 ORTHO05D005965 3.2e-168 595.9 443 68.4
Haze_08299 Corylus avellana HOM05D004955 ORTHO05D005965 1.4e-166 590.5 507 63.7
Pp3c15_140 Physcomitrium patens HOM05D004955 ORTHO05D005965 4.2e-160 568.9 567 54.5
AagrBONN_evm.TU.Sc2ySwM_362.507 Anthoceros agrestis HOM05D004955 ORTHO05D005965 1.1e-155 554.3 554 55.2
SGA_v2.0_scaffold157G37418 Striga asiatica HOM05D004955 ORTHO05D005965 2.7e-154 549.7 455 64.2
CDE08G0647 Ceratophyllum demersum HOM05D004955 ORTHO05D005965 8.0e-151 538.1 406 67.0
Mapoly0074s0077 Marchantia polymorpha HOM05D004955 ORTHO05D005965 4.8e-148 528.9 565 52.7
SMO174G0171 Selaginella moellendorffii HOM05D004955 ORTHO05D005965 2.7e-146 523.1 541 53.4
Atru.chr6.1775 Acer truncatum HOM05D004955 ORTHO05D005965 1.3e-145 520.8 364 73.9
CBR_g36832 Chara braunii HOM05D004955 ORTHO05D005965 8.0e-143 511.5 570 51.2
Haze_08304 Corylus avellana HOM05D004955 ORTHO05D005965 4.4e-125 452.6 407 60.4
Glyma.01G201400 Glycine max HOM05D004955 ORTHO05D005965 6.2e-119 432.2 300 74.3
PRCOL_00000375 Prasinoderma coloniale HOM05D004955 ORTHO05D005965 1.6e-111 407.5 540 46.5
TPR.G6765 Trifolium pratense HOM05D004955 ORTHO05D005965 6.2e-111 405.6 569 46.4
MCO08G085 Micromonas commoda HOM05D004955 ORTHO05D005965 1.6e-106 391.0 587 42.4
Nn3g19414 Nelumbo nucifera HOM05D004955 ORTHO05D005965 3.9e-105 386.3 281 70.8
Cre08.g379700 Chlamydomonas reinhardtii HOM05D004955 ORTHO05D005965 4.0e-102 376.3 546 44.0
Actinidia03393 Actinidia chinensis HOM05D004955 ORTHO05D005965 7.1e-91 339.0 487 45.4
Glyma.16G093333 Glycine max HOM05D004955 ORTHO05D005965 4.0e-78 296.6 201 73.6
MD09G1284100 Malus domestica HOM05D004955 ORTHO05D005965 1.9e-59 234.6 378 44.2
Haze_26496 Corylus avellana HOM05D004955 ORTHO05D005965 2.7e-50 204.1 284 42.6
Glyma.16G093267 Glycine max HOM05D004955 ORTHO05D005965 1.1e-48 198.7 142 71.1
Glyma.01G201300 Glycine max HOM05D004955 ORTHO05D005965 4.5e-45 186.8 142 69.0
SEGI_27182 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 5.5e-43 179.9 292 40.4
BcaB01g01790 Brassica carinata HOM05D004955 ORTHO05D005965 3.3e-40 170.6 147 57.1
Cc05_g03290 Coffea canephora HOM05D004955 ORTHO05D005965 1.7e-39 168.3 110 72.7
Haze_08302 Corylus avellana HOM05D004955 ORTHO05D005965 4.5e-37 160.2 192 51.6
SHI01420 Sapria himalayana HOM05D004955 ORTHO05D000023 3.6e-34 150.6 108 69.4
vmacro21667 Vaccinium macrocarpon HOM05D004955 ORTHO05D005965 8.8e-33 146.0 89 80.9
BcaB01g06395 Brassica carinata HOM05D004955 ORTHO05D005965 5.4e-30 136.7 100 64.0
SEGI_19301 Sequoiadendron giganteum HOM05D005396 ORTHO05D006400 2.3e-25 121.3 139 49.6
CARHR185470 Cardamine hirsuta HOM05D004955 ORTHO05D005965 1.7e-23 115.2 87 67.8
Glyma.16G093100 Glycine max HOM05D004955 ORTHO05D005965 3.7e-23 114.0 77 72.7
Ah.04g153990 Amaranthus hybridus HOM05D004955 ORTHO05D005965 4.0e-17 94.0 204 32.8
ATR0149G020 Amborella trichopoda HOM05D004955 ORTHO05D005965 4.0e-17 94.0 87 56.3
Haze_08300 Corylus avellana HOM05D004955 ORTHO05D005965 4.0e-17 94.0 87 62.1
SEGI_05540 Sequoiadendron giganteum HOM05D004955 ORTHO05D005965 1.2e-13 82.4 73 54.8


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