Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CSS0030299 Camellia sinensis var. sinensis HOM05D012645 ORTHO05D010731 2.1e-42 175.3 87 100.0
Potri.015G139966 Populus trichocarpa HOM05D010814 ORTHO05D011500 8.7e-12 73.6 88 46.6
Thecc.03G175000 Theobroma cacao HOM05D012645 ORTHO05D011500 1.1e-11 73.2 88 47.7
Rhsim03G0179400 Rhododendron simsii HOM05D019148 ORTHO05D019092 7.3e-11 70.5 90 48.9
Manes.06G146100 Manihot esculenta HOM05D012645 ORTHO05D011500 1.6e-10 69.3 87 43.7
CiPaw.04G065300 Carya illinoinensis HOM05D012645 ORTHO05D011500 2.8e-10 68.6 87 46.0
Manes.14G026900 Manihot esculenta HOM05D015019 ORTHO05D013840 3.6e-10 68.2 87 41.4
Potri.012G138200 Populus trichocarpa HOM05D010814 ORTHO05D011500 1.4e-09 66.2 88 43.2
Hma1.2p1_0514F.1_g169790 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 2.4e-09 65.5 87 42.5
Hma1.2p1_3255F.1_g334555 Hydrangea macrophylla HOM05D008852 ORTHO05D010731 2.4e-09 65.5 87 42.5
Dinv35204 Davidia involucrata HOM05D061900 ORTHO05D019092 5.3e-09 64.3 64 50.0
Lsat_1_v5_gn_2_133720 Lactuca sativa HOM05D019148 ORTHO05D019092 2.0e-08 62.4 81 43.2
Lsat_1_v5_gn_0_29740 Lactuca sativa HOM05D019148 ORTHO05D019092 2.6e-08 62.0 80 46.2
Gohir.A12G258500 Gossypium hirsutum HOM05D012645 ORTHO05D011500 4.4e-08 61.2 92 42.4
Thecc.03G275000 Theobroma cacao HOM05D008852 ORTHO05D010731 5.8e-08 60.8 87 42.5
CiPaw.04G065000 Carya illinoinensis HOM05D018452 ORTHO05D013840 2.2e-07 58.9 88 42.0
Gohir.A08G179900 Gossypium hirsutum HOM05D008852 ORTHO05D010731 2.9e-07 58.5 90 40.0
CiPaw.11G138500 Carya illinoinensis HOM05D008852 ORTHO05D010731 4.9e-07 57.8 87 37.9
Eucgr.D01882 Eucalyptus grandis HOM05D008852 ORTHO05D010731 6.4e-07 57.4 87 35.6
Potri.015G139900 Populus trichocarpa HOM05D015019 ORTHO05D013840 6.4e-07 57.4 90 41.1
Gohir.D08G198700 Gossypium hirsutum HOM05D008852 ORTHO05D010731 8.4e-07 57.0 90 38.9
Nn1g01419 Nelumbo nucifera HOM05D008852 ORTHO05D010731 8.4e-07 57.0 88 39.8
COL.COLO4_34424 Corchorus olitorius HOM05D008852 ORTHO05D010731 1.1e-06 56.6 89 38.2
Gorai.008G278200 Gossypium raimondii HOM05D012645 ORTHO05D011500 1.1e-06 56.6 92 39.1
Thecc.03G175100 Theobroma cacao HOM05D015019 ORTHO05D013840 1.1e-06 56.6 87 37.9
Gohir.D12G259750 Gossypium hirsutum HOM05D012645 ORTHO05D011500 1.4e-06 56.2 91 38.5
Gorai.004G209500 Gossypium raimondii HOM05D008852 ORTHO05D010731 1.4e-06 56.2 90 38.9
Prupe.5G095200 Prunus persica HOM05D008852 ORTHO05D010731 3.2e-06 55.1 87 35.6
Gohir.A09G180600 Gossypium hirsutum HOM05D015019 ORTHO05D013840 4.2e-06 54.7 87 34.5
QL12p017912 Quercus lobata HOM05D008852 ORTHO05D010731 7.1e-06 53.9 76 39.5
Potri.001G107400 Populus trichocarpa HOM05D008852 ORTHO05D010731 9.3e-06 53.5 87 33.3
Potri.003G124000 Populus trichocarpa HOM05D008852 ORTHO05D010731 9.3e-06 53.5 89 34.8


User provided reference genes

Program Settings